diff --git a/.gitignore b/.gitignore
index 00b4768..0c7aa7f 100644
--- a/.gitignore
+++ b/.gitignore
@@ -3,3 +3,5 @@
 build
 dist
 src
+neuroclick
+_build
diff --git a/docs/Makefile b/docs/Makefile
new file mode 100644
index 0000000..3963494
--- /dev/null
+++ b/docs/Makefile
@@ -0,0 +1,20 @@
+# Minimal makefile for Sphinx documentation
+#
+
+# You can set these variables from the command line.
+SPHINXOPTS    =
+SPHINXBUILD   = sphinx-build
+SPHINXPROJ    = neuroclick
+SOURCEDIR     = .
+BUILDDIR      = _build
+
+# Put it first so that "make" without argument is like "make help".
+help:
+	@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
+
+.PHONY: help Makefile
+
+# Catch-all target: route all unknown targets to Sphinx using the new
+# "make mode" option.  $(O) is meant as a shortcut for $(SPHINXOPTS).
+%: Makefile
+	@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
\ No newline at end of file
diff --git a/docs/code.rst b/docs/code.rst
new file mode 100644
index 0000000..e5f2416
--- /dev/null
+++ b/docs/code.rst
@@ -0,0 +1,7 @@
+Autodoc test
+===============
+
+
+.. click:: neuropype:cli
+   :prog: neuropype
+   :show-nested:
diff --git a/docs/conf.py b/docs/conf.py
new file mode 100644
index 0000000..692ca05
--- /dev/null
+++ b/docs/conf.py
@@ -0,0 +1,179 @@
+# -*- coding: utf-8 -*-
+#
+# neuroclick documentation build configuration file, created by
+# sphinx-quickstart on Fri Jan 27 18:55:36 2017.
+#
+# This file is execfile()d with the current directory set to its
+# containing dir.
+#
+# Note that not all possible configuration values are present in this
+# autogenerated file.
+#
+# All configuration values have a default; values that are commented out
+# serve to show the default.
+
+# If extensions (or modules to document with autodoc) are in another directory,
+# add these directories to sys.path here. If the directory is relative to the
+# documentation root, use os.path.abspath to make it absolute, like shown here.
+#
+import os
+import sys
+sys.path.insert(0, os.path.abspath('../neuropype_cli'))
+
+
+# from mock import Mock as MagicMock
+
+# class Mock(MagicMock):  
+#     @classmethod
+#     def __getattr__(cls, name):
+#             return MagicMock()
+
+# MOCK_MODULES = ['numpy', 'scipy', 'scipy.linalg', 'scipy.signal']  
+# sys.modules.update((mod_name, Mock()) for mod_name in MOCK_MODULES)
+
+# -- General configuration ------------------------------------------------
+
+# If your documentation needs a minimal Sphinx version, state it here.
+#
+# needs_sphinx = '1.0'
+
+# Add any Sphinx extension module names here, as strings. They can be
+# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
+# ones.
+extensions = ['sphinx.ext.autodoc',
+    'sphinx.ext.doctest',
+    'sphinx.ext.intersphinx',
+    'sphinx.ext.todo',
+    'sphinx.ext.coverage',
+    'sphinx.ext.mathjax',
+    'sphinx_click.ext']
+
+# autodoc_mock_imports = ['numpy', 'nipype.pipeline.engine', 'click', 'neuropype_ephy']
+autodoc_mock_imports = ['numpy', 'nipype.pipeline.engine',  'neuropype_ephy']
+
+# Add any paths that contain templates here, relative to this directory.
+templates_path = ['_templates']
+
+# The suffix(es) of source filenames.
+# You can specify multiple suffix as a list of string:
+#
+# source_suffix = ['.rst', '.md']
+source_suffix = '.rst'
+
+# The master toctree document.
+master_doc = 'index'
+
+# General information about the project.
+project = u'neuroclick'
+copyright = u'2017, Dmitrii Altukhov'
+author = u'Dmitrii Altukhov'
+
+# The version info for the project you're documenting, acts as replacement for
+# |version| and |release|, also used in various other places throughout the
+# built documents.
+#
+# The short X.Y version.
+version = u'0.1'
+# The full version, including alpha/beta/rc tags.
+release = u'0.1.1'
+
+# The language for content autogenerated by Sphinx. Refer to documentation
+# for a list of supported languages.
+#
+# This is also used if you do content translation via gettext catalogs.
+# Usually you set "language" from the command line for these cases.
+language = None
+
+# List of patterns, relative to source directory, that match files and
+# directories to ignore when looking for source files.
+# This patterns also effect to html_static_path and html_extra_path
+exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store']
+
+# The name of the Pygments (syntax highlighting) style to use.
+pygments_style = 'sphinx'
+
+# If true, `todo` and `todoList` produce output, else they produce nothing.
+todo_include_todos = True
+
+
+# -- Options for HTML output ----------------------------------------------
+
+# The theme to use for HTML and HTML Help pages.  See the documentation for
+# a list of builtin themes.
+#
+# html_theme = 'alabaster'
+html_theme = 'default'
+
+# Theme options are theme-specific and customize the look and feel of a theme
+# further.  For a list of options available for each theme, see the
+# documentation.
+#
+# html_theme_options = {}
+
+# Add any paths that contain custom static files (such as style sheets) here,
+# relative to this directory. They are copied after the builtin static files,
+# so a file named "default.css" will overwrite the builtin "default.css".
+html_static_path = ['_static']
+
+
+# -- Options for HTMLHelp output ------------------------------------------
+
+# Output file base name for HTML help builder.
+htmlhelp_basename = 'neuroclickdoc'
+
+
+# -- Options for LaTeX output ---------------------------------------------
+
+latex_elements = {
+    # The paper size ('letterpaper' or 'a4paper').
+    #
+    # 'papersize': 'letterpaper',
+
+    # The font size ('10pt', '11pt' or '12pt').
+    #
+    # 'pointsize': '10pt',
+
+    # Additional stuff for the LaTeX preamble.
+    #
+    # 'preamble': '',
+
+    # Latex figure (float) alignment
+    #
+    # 'figure_align': 'htbp',
+}
+
+# Grouping the document tree into LaTeX files. List of tuples
+# (source start file, target name, title,
+#  author, documentclass [howto, manual, or own class]).
+latex_documents = [
+    (master_doc, 'neuroclick.tex', u'neuroclick Documentation',
+     u'Dmitrii Altukhov', 'manual'),
+]
+
+
+# -- Options for manual page output ---------------------------------------
+
+# One entry per manual page. List of tuples
+# (source start file, name, description, authors, manual section).
+man_pages = [
+    (master_doc, 'neuroclick', u'neuroclick Documentation',
+     [author], 1)
+]
+
+
+# -- Options for Texinfo output -------------------------------------------
+
+# Grouping the document tree into Texinfo files. List of tuples
+# (source start file, target name, title, author,
+#  dir menu entry, description, category)
+texinfo_documents = [
+    (master_doc, 'neuroclick', u'neuroclick Documentation',
+     author, 'neuroclick', 'One line description of project.',
+     'Miscellaneous'),
+]
+
+
+
+
+# Example configuration for intersphinx: refer to the Python standard library.
+intersphinx_mapping = {'https://docs.python.org/': None}
diff --git a/docs/hahaha.rst b/docs/hahaha.rst
new file mode 100644
index 0000000..efc86e8
--- /dev/null
+++ b/docs/hahaha.rst
@@ -0,0 +1,5 @@
+Header
+======
+
+Just testing things here
+
diff --git a/docs/index.rst b/docs/index.rst
new file mode 100644
index 0000000..d4ce3f1
--- /dev/null
+++ b/docs/index.rst
@@ -0,0 +1,24 @@
+.. neuroclick documentation master file, created by
+   sphinx-quickstart on Fri Jan 27 18:55:36 2017.
+   You can adapt this file completely to your liking, but it should at least
+   contain the root `toctree` directive.
+
+Welcome to neuroclick's documentation!
+======================================
+
+.. toctree::
+   :maxdepth: 2
+   :caption: Contents:
+
+   intro
+   code
+   hahaha
+
+
+
+.. Indices and tables
+.. ==================
+
+.. * :ref:`genindex`
+.. * :ref:`modindex`
+.. * :ref:`search`
diff --git a/docs/intro.rst b/docs/intro.rst
new file mode 100644
index 0000000..3454979
--- /dev/null
+++ b/docs/intro.rst
@@ -0,0 +1,5 @@
+Introducion
+===========
+
+.. Some introduction here
+Also I would like to thank my mom
diff --git a/neuropype_cli/neuropype.py b/neuropype_cli/neuropype.py
index fe5f4eb..09d8e8c 100644
--- a/neuropype_cli/neuropype.py
+++ b/neuropype_cli/neuropype.py
@@ -1,4 +1,4 @@
-"""Command line interface for neuropype_ephy package"""
+''' Command line interface for neuropype_ephy package '''
 import click
 import nipype.pipeline.engine as pe
 
@@ -19,34 +19,7 @@
 @click.option('--verbose/--no-verbose', default=True,
               help='verbosity level')
 def cli(ncpu, plugin, save_path, workflow_name, verbose):
-    """
-    Parallel processing of MEG/EEG data
-
-Description:
-
-    Create and connect nodes to build a data processing pipeline.
-
-    Nodes are connected in the order of execution except for the input
-    node which is always the last (restriction of Click framework which allowes only
-    one command with undefined number of inputs given that this command goes last)
-
-    To make the best use of this tool it's strongly recommended to use wildcards
-    to fetch the files that you want to process.
-
-Examples:
-
-    neuropype -p Linear ds2fif epoch -l 20 ep2ts mse input ./*/Control01_closed*.ds
-
-    This pipeline gets all .ds files that are located in subfolders of the
-    current folder 'input ./s/Control01_closed*.ds',
-    converts them to .fif format [ds2fif], cuts data in epochs of 20 seconds [epoch -l 20],
-    converts -epo.fif files with epochs to .npy format [ep2ts]
-    and computes multiscale entropy on the resulting epochs [mse].
-    All calculations are run sequentially which is governed by
-    -p Linear option
-
-
-    """
+    """Parallel processing of MEG/EEG data"""
     output_greeting()
 
 
@@ -111,7 +84,7 @@ def process_pipeline(nodes, ncpu, plugin, save_path, workflow_name, verbose):
 @cli.command('input')
 @click.argument('fif_files', nargs=-1, type=click.Path(exists=True))
 def infosrc(fif_files):
-    """Get input files
+    '''Create input node.
 
     Use wildcards to run computations on multiple files;
     To check yourself it's a good idea to run ls command first like this:
@@ -121,7 +94,7 @@ def infosrc(fif_files):
 
     $ neuropype input ./*/*.fif
 
-    """
+    '''
 
     from os.path import abspath, split
     from os.path import commonprefix as cprfx
@@ -158,7 +131,7 @@ def infosrc(fif_files):
 @click.option('--fmax', default=300.,
               help='higher frequency bound; default=300')
 def psd(fmin, fmax):
-    """Compute power spectral density
+    '''Create power computation node.
 
     Lower and higher frequency bounds for computation
     can be changed
@@ -169,7 +142,7 @@ def psd(fmin, fmax):
 
     $ neuropype pwr input ~/fif_epochs/*/*-epo.fif
 
-    """
+    '''
     from neuropype_ephy.interfaces.mne.power import Power
     # click.echo(list(fif_files))
     power = pe.Node(interface=Power(), name='pwr')
@@ -192,7 +165,7 @@ def psd(fmin, fmax):
 @click.option('--sfreq', '-s', nargs=1, type=click.INT,
               help='data sampling frequency')
 def connectivity(band, method, sfreq):
-    """Compute spectral connectivity measures"""
+    """Create spectral connectivity node"""
     from neuropype_ephy.interfaces.mne.spectral import SpectralConn
     # if not method:
     #     method = ('imcoh',)
@@ -209,7 +182,7 @@ def connectivity(band, method, sfreq):
 # --------------------- Epochs to timeseries node ------------------------- #
 @cli.command('ep2ts')
 def fif_ep_2_ts():
-    """Convert -epo.fif files to .npy"""
+    ''' Create a node for epochs 2 npy timeseries conversion '''
 
     from neuropype_ephy.nodes.import_data import Ep2ts
     ep2ts = pe.Node(interface=Ep2ts(), name='ep2ts')
@@ -222,7 +195,7 @@ def fif_ep_2_ts():
 @click.option('-m', default=2)
 @click.option('-r', default=0.2)
 def multiscale(m, r):
-    """Compute multiscale entropy
+    """Create multiscale entropy node
 
     Experimental functionality.
     Available only in mse branch of neuropype_ephy
@@ -264,7 +237,7 @@ def ica(n_components, ecg_ch_name, eog_ch_name):
 @click.option('--ds_freq', '-d', type=click.INT,
               help='downsampling frequency')
 def preproc(l_freq, h_freq, ds_freq):
-    """Filter and downsample data
+    """Create preprocessing node.
 
 
     Filter and downsample of raw .fif data
@@ -289,7 +262,12 @@ def preproc(l_freq, h_freq, ds_freq):
 # -------------------------- DS2FIF node --------------------------------- #
 @cli.command('ds2fif')
 def ds2fif():
-    """Convert CTF data in .ds format to .fif"""
+    """Create ds2fif node.
+
+
+    Convert CTF .ds raw data to .fif format
+
+    """
     from neuropype_ephy.nodes.import_data import ConvertDs2Fif
 
     ds2fif_node = pe.Node(interface=ConvertDs2Fif(), name='ds2fif')
@@ -303,7 +281,9 @@ def ds2fif():
 @click.option('--length', '-l', type=click.FLOAT,
               help='epoch length')
 def epoch(length):
-    """Perform epoching on raw .fif resting state data"""
+    """Epoch raw .fif resting state data
+
+    """
     from neuropype_ephy.interfaces.mne.preproc import CreateEp
 
     epoch_node = pe.Node(interface=CreateEp(), name='epoch')
@@ -320,7 +300,7 @@ def map_path(key, iter_mapping):
 
 
 def output_greeting():
-    """Print greeting"""
+    """Output greeting"""
 
     click.echo(click.style(r'''
   _  _ ___ _   _ ___  ___  _____   _____ ___
diff --git a/requirements.txt b/requirements.txt
index 7947f15..cbce303 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1 +1,48 @@
 -e git+https://github.com/dmalt/neuropype_ephy#egg=neuropype_ephy-0.0.1
+alabaster==0.7.10
+Babel==2.5.1
+backports.functools-lru-cache==1.4
+certifi==2017.7.27.1
+chardet==3.0.4
+click==6.7
+configparser==3.5.0
+cycler==0.10.0
+decorator==4.1.2
+docutils==0.14
+funcsigs==1.0.2
+future==0.16.0
+idna==2.6
+imagesize==0.7.1
+isodate==0.6.0
+Jinja2==2.9.6
+lxml==4.1.0
+MarkupSafe==1.0
+matplotlib==2.1.0
+mne==0.15
+mock==2.0.0
+networkx==2.0
+nibabel==2.2.0
+nipype==0.13.1
+numpy==1.13.3
+pbr==3.1.1
+prov==1.5.1
+py==1.4.34
+pydotplus==2.0.2
+Pygments==2.2.0
+pyparsing==2.2.0
+pytest==3.2.3
+python-dateutil==2.6.1
+pytz==2017.2
+rdflib==4.2.2
+requests==2.18.4
+scipy==0.19.1
+simplejson==3.11.1
+six==1.11.0
+snowballstemmer==1.2.1
+Sphinx==1.6.4
+sphinx-click==1.0.3
+sphinxcontrib-websupport==1.0.1
+subprocess32==3.2.7
+traits==4.6.0
+typing==3.6.2
+urllib3==1.22