Support Notebooks #3186

adrienrenaud · 2018-10-15T18:53:55Z

How do I work with notebooks in Theia? I would like multi-language notebooks like Jupyter or Zeppelin... but inside Theia.

svenefftinge · 2018-10-19T07:44:18Z

You'd need to create an extension for those formats.

adrienrenaud · 2019-02-10T03:32:28Z

I almost started the extension @svenefftinge :)
I'm using @theia/mini-browser to embed a notebook served by a jupyter server.
It works fine:

I don't know how mini-browser works. Does it embed the requested url in an iframe? In the past, I have successfully embed jupyter-notebooks in applications using Iframe.

Would you support an extension that needs a external jupyter-server?
If yes, we could think of an extension that:

starts a jupyter server at the root of the workspace
open any notebook file with extension .ipynb in a iframe

svenefftinge · 2019-02-10T08:30:23Z

Nice! Instead of just embedding the jupyter views in an Iframe, I'd rather go for a full jupyter integration, where I can see and manage my running kernels. So basically an integration of the jupyterlab notebook support for Theia. Another alternative is to look at the VS Code extension and integrate that:
https://code.visualstudio.com/docs/python/jupyter-support

adrienrenaud · 2019-02-10T19:43:55Z

Instead of just embedding the jupyter views in an Iframe, I'd rather go for a full jupyter integration,

I agree but iframes seem to give a quick practical solution.

So basically an integration of the jupyterlab notebook support for Theia.

That would make coding great again. No less.

Another alternative is to look at the VS Code extension

An excellent solution.

rayh · 2019-04-10T06:51:09Z

@svenefftinge any idea of what would be involved to port that plugin over?

akosyakov · 2019-04-10T07:41:24Z

@rayh python extension should work in Theia already, could you try: https://github.com/theia-ide/theia/wiki/Testing-VS-Code-extensions

adrienrenaud · 2019-04-12T10:29:03Z

@akosyakov vscode:extension/ms-python.python works fine (debug, lint, refactor) for me on d380b17 but I can't open the Python interactive window, neither from the command palette or on clicking on Run Cell. It might be related to using conda environment: see attached log.

theia_jupyter.log

adrienrenaud · 2019-04-14T05:05:31Z

Adding the conda path in .theia/settings.json (in my case "python.condaPath": "/opt/anaconda3/bin/conda") fix some of the issues. I'm able to open the Python Interactive window: Python: Show Python Interactive window and matplotlib graphs are rendering.
.
But hitting Run Cell does not produce any effect and nothing appears in the backend logs, only in the navigator console:

jgbradley1 · 2019-04-23T22:27:37Z

@adrienrenaud it's not related to the conda environment. I tested in a virtual environment and a regular environment (no virtual environment and no conda installed). Both have the same issue. Run Cell doesn't work in either environment setup.

BroKun · 2019-10-10T12:13:01Z

I think the integration of jupyterlab will bring a better experience. The editor, kernel manager and command palette can all be integrated. I am currently doing this. Do we need it as an extension? @akosyakov @svenefftinge

akosyakov · 2019-10-10T15:21:03Z

@BroKun do you mean whether we can have it under theia-ide org as a native Theia extension? It would be fine with me, do it.

akosyakov · 2019-12-02T05:50:36Z

@adrienrenaud @jgbradley1 We landed webviews support last week. Could you check whether you still have issues with VS Code python extension.

Generally it would be helpful if someone have a look what is going on there.

fGencturk · 2019-12-12T10:02:23Z

vscode-python extension issue in theia #4956 (comment)

dannaf · 2020-01-07T21:34:34Z

Any recent progress with this? Looks like @adrienrenaud and others have a nice start, thanks!

Also, is this relevant here? https://github.com/nteract/hydrogen/

akosyakov · 2020-04-07T12:27:16Z

Issues which observed with the latest version (2020.3.71659) of Python extension:

vscode.workspace.fs.stat is not implemented:

root ERROR [hosted-plugin: 2692] Error Python Extension: 2020-04-07 12:19:27: stat() failed for "python" TypeError: this.vscfs.stat is not a function
    at v.stat (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:1:408800)
    at b.pathExists (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:1:411206)
    at b.fileExists (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:1:411423)
    at w.fileExists (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:1:413580)
    at p.getExecutablePath (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:1:467961)
    at C.getActiveInterpreter (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:75:1115839)
    at process._tickCallback (internal/process/next_tick.js:68:7)

Python: Create Blank New Jupyter Notebook command fails with an error in the webview:

/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/datascience-ui/notebook/monaco.bundle.js, /tmp/vscode-unpacked/ms-python-release.vsix/extension/out/datascience-ui/notebook/commons.initial.bundle.js, /tmp/vscode-unpacked/ms-python-release.vsix/extension/out/datascience-ui/notebook/nativeEditor.js is not a valid file name

Python: Open in Notebook Editor fails with:

root ERROR [hosted-plugin: 2692] Error Python Extension: 2020-04-07 12:28:07: DataScience Error Error: This WebviewPanel is disposed!
    at WebviewPanelImpl.checkIsDisposed (/workspace/theia/packages/plugin-ext/lib/plugin/webviews.js:388:19)
    at WebviewPanelImpl.get [as viewColumn] (/workspace/theia/packages/plugin-ext/lib/plugin/webviews.js:309:18)
    at t.WebPanel.show (/tmp/vscode-unpacked/ms-python-release.vsix/extension/out/client/extension.js:75:190325)
    at process._tickCallback (internal/process/next_tick.js:68:7)

vscode.workspace.fs.readDirectory is not implemented:

Python Extension (lookForInterpretersInVenvs): TypeError: this.vscfs.readDirectory is not a function
    at RawFileSystem.listdir (/workspace/theia/plugins/vscode-python/out/client/common/platform/fileSystem.js:217:40)
    at FileSystemUtils.listdir (/workspace/theia/plugins/vscode-python/out/client/common/platform/fileSystem.js:321:35)
    at FileSystemUtils.getSubDirectories (/workspace/theia/plugins/vscode-python/out/client/common/platform/fileSystem.js:332:34)
    at FileSystem.getSubDirectories (/workspace/theia/plugins/vscode-python/out/client/common/platform/fileSystem.js:473:27)
    at WorkspaceVirtualEnvService.lookForInterpretersInVenvs (/workspace/theia/plugins/vscode-python/out/client/interpreter/locators/services/baseVirtualEnvService.js:41:14)
    at Promise.all.searchPaths.map (/workspace/theia/plugins/vscode-python/out/client/interpreter/locators/services/baseVirtualEnvService.js:37:58)
    at Array.map (<anonymous>)
    at WorkspaceVirtualEnvService.suggestionsFromKnownVenvs (/workspace/theia/plugins/vscode-python/out/client/interpreter/locators/services/baseVirtualEnvService.js:37:40)
    at process._tickCallback (internal/process/next_tick.js:68:7)

azatsarynnyy · 2020-06-22T07:48:08Z

FYI:
Python extension relies on CustomEditor API for rendering Jupyter Notebooks.
We (at Red Hat) are going to start working on #6636

akosyakov · 2020-06-28T10:35:55Z

It is working from #7908 if you use the last version which does not make use of the custom editor api, namely: https://github.com/microsoft/vscode-python/releases/tag/2020.5.86806

There are still some issue with loading monaco within the webview:

It should be handled in the separate PR from the VS Code fs support.

azatsarynnyy · 2020-07-09T06:47:10Z

I tried the latest Python extension and it works with #7908 as well.
As I see from https://github.com/microsoft/vscode-python/pull/12188/files#diff-b1e7b24833976c9e40041d298ee03890R201, the extension actually doesn't depend on CustomEditor Plugins API but it has some experimental feature which the user can opt-in.

akosyakov · 2020-07-15T13:10:45Z

There are still some issue with loading monaco within the webview:

I've verified that VS Codespaces have the same issues. Nothing to fix here.

akosyakov · 2020-08-13T12:20:31Z

notebooks from python extension should work nicely now.

tsmaeder · 2020-09-30T12:27:28Z

Notebooks with the version of the extension you mentioned (2020.5.xxx) do not work on Firefox: I get 404's, for example:

GEThttp://ba7c8bf3-71b8-4260-bbc5-6e2fadff213a.webview.localhost:3000/webview/theia-resource/file///c%3A/Users/thomas/AppData/Local/Temp/vscode-unpacked/ms-python-release.vsix/extension/out/datascience-ui/notebook/nativeEditor.js
[HTTP/1.1 404 Not Found 15ms]

when doing "Python: Create New Blank Jupyter Notebook" The exact same thing works when doing it from Chromium.

azatsarynnyy · 2020-09-30T13:00:30Z

I've just checked it with the latest Python extension. Works well in Chrome:

In Firefox, I got the same errors as @tsmaeder

tsmaeder · 2023-05-31T11:51:36Z

Closing in favor of #8395

svenefftinge changed the title ~~Notebooks in Theia~~ Support Notebooks Oct 19, 2018

svenefftinge added the enhancement issues that are enhancements to current functionality - nice to haves label Oct 19, 2018

adrienrenaud mentioned this issue Feb 10, 2019

Integration with Theia + plain text notebook format? jupyterlab/jupyterlab#4200

Open

akosyakov mentioned this issue Apr 20, 2019

VS Code Python extension #4956

Closed

5 tasks

akosyakov added the help wanted issues meant to be picked up, require help label Dec 2, 2019

akosyakov self-assigned this Apr 7, 2020

akosyakov removed 🤔 needs more info issues that require more info from the author help wanted issues meant to be picked up, require help labels Apr 7, 2020

JPinkney mentioned this issue May 1, 2020

Jupyter Notebooks native support through latest Python VS Code extension eclipse-che/che#16818

Closed

4 tasks

akosyakov mentioned this issue Jun 12, 2020

Python extension on Theia throws errors #7999

Closed

kittaakos mentioned this issue Jun 16, 2020

[python]Problems with starting ms-python VSCode extension #8022

Closed

3 tasks

vince-fugnitto mentioned this issue Jul 13, 2020

vscode extension - jupyter notebook fails. #8161

Closed

saulshanabrook mentioned this issue Jul 26, 2020

JupyterLab vision for the next few years jupyterlab/frontends-team-compass#80

Open

akosyakov closed this as completed Aug 13, 2020

tsmaeder reopened this Sep 30, 2020

akosyakov removed their assignment Nov 2, 2020

tsmaeder closed this as completed May 31, 2023

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Support Notebooks #3186

Support Notebooks #3186

adrienrenaud commented Oct 15, 2018

svenefftinge commented Oct 19, 2018

adrienrenaud commented Feb 10, 2019 •

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svenefftinge commented Feb 10, 2019

adrienrenaud commented Feb 10, 2019

rayh commented Apr 10, 2019

akosyakov commented Apr 10, 2019

adrienrenaud commented Apr 12, 2019

adrienrenaud commented Apr 14, 2019

jgbradley1 commented Apr 23, 2019

BroKun commented Oct 10, 2019 •

edited

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akosyakov commented Oct 10, 2019 •

edited

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akosyakov commented Dec 2, 2019

fGencturk commented Dec 12, 2019

dannaf commented Jan 7, 2020

akosyakov commented Apr 7, 2020 •

edited

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azatsarynnyy commented Jun 22, 2020

akosyakov commented Jun 28, 2020

azatsarynnyy commented Jul 9, 2020

akosyakov commented Jul 15, 2020

akosyakov commented Aug 13, 2020

tsmaeder commented Sep 30, 2020

azatsarynnyy commented Sep 30, 2020

tsmaeder commented May 31, 2023

Support Notebooks #3186

Support Notebooks #3186

Comments

adrienrenaud commented Oct 15, 2018

svenefftinge commented Oct 19, 2018

adrienrenaud commented Feb 10, 2019 • edited Loading

svenefftinge commented Feb 10, 2019

adrienrenaud commented Feb 10, 2019

rayh commented Apr 10, 2019

akosyakov commented Apr 10, 2019

adrienrenaud commented Apr 12, 2019

adrienrenaud commented Apr 14, 2019

jgbradley1 commented Apr 23, 2019

BroKun commented Oct 10, 2019 • edited Loading

akosyakov commented Oct 10, 2019 • edited Loading

akosyakov commented Dec 2, 2019

fGencturk commented Dec 12, 2019

dannaf commented Jan 7, 2020

akosyakov commented Apr 7, 2020 • edited Loading

azatsarynnyy commented Jun 22, 2020

akosyakov commented Jun 28, 2020

azatsarynnyy commented Jul 9, 2020

akosyakov commented Jul 15, 2020

akosyakov commented Aug 13, 2020

tsmaeder commented Sep 30, 2020

azatsarynnyy commented Sep 30, 2020

tsmaeder commented May 31, 2023

adrienrenaud commented Feb 10, 2019 •

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BroKun commented Oct 10, 2019 •

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akosyakov commented Oct 10, 2019 •

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akosyakov commented Apr 7, 2020 •

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