-
Notifications
You must be signed in to change notification settings - Fork 0
/
ejprd_resource_metadata_ontology.owl
6404 lines (4824 loc) · 448 KB
/
ejprd_resource_metadata_ontology.owl
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
<?xml version="1.0"?>
<rdf:RDF xmlns="https://w3id.org/ejp-rd/vocabulary#"
xml:base="https://w3id.org/ejp-rd/vocabulary"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:ns="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:dcam="http://purl.org/dc/dcam/"
xmlns:prov="http://www.w3.org/ns/prov#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:terms="http://purl.org/dc/terms/"
xmlns:schema="http://schema.org/"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:resource="http://semanticscience.org/resource/"
xmlns:edamontology="http://edamontology.org/">
<owl:Ontology rdf:about="https://w3id.org/ejp-rd/vocabulary"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://edamontology.org/created_in -->
<owl:AnnotationProperty rdf:about="http://edamontology.org/created_in"/>
<!-- http://edamontology.org/isdebtag -->
<owl:AnnotationProperty rdf:about="http://edamontology.org/isdebtag"/>
<!-- http://edamontology.org/notRecommendedForAnnotation -->
<owl:AnnotationProperty rdf:about="http://edamontology.org/notRecommendedForAnnotation"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000179 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000179"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000180 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000180"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000116 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000233 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000233"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000234 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000234"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000600 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000600"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000601 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000601"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000602 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000602"/>
<!-- http://purl.obolibrary.org/obo/IAO_0010000 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0010000"/>
<!-- http://purl.obolibrary.org/obo/RO_0001900 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001900"/>
<!-- http://purl.obolibrary.org/obo/is_anti_symmetric -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/is_anti_symmetric"/>
<!-- http://purl.obolibrary.org/obo/is_reflexive -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/is_reflexive"/>
<!-- http://purl.obolibrary.org/obo/is_symmetric -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/is_symmetric"/>
<!-- http://purl.obolibrary.org/obo/transitive_over -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/transitive_over"/>
<!-- http://purl.org/dc/dcam/rangeIncludes -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/dcam/rangeIncludes"/>
<!-- http://purl.org/dc/elements/1.1/identifier -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/identifier"/>
<!-- http://purl.org/dc/terms/conformsTo -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/conformsTo"/>
<!-- http://purl.org/dc/terms/description -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/description"/>
<!-- http://purl.org/dc/terms/hasVersion -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/hasVersion"/>
<!-- http://purl.org/dc/terms/identifier -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/identifier"/>
<!-- http://purl.org/dc/terms/isPartOf -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/isPartOf"/>
<!-- http://purl.org/dc/terms/issued -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/issued"/>
<!-- http://purl.org/dc/terms/license -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/license"/>
<!-- http://purl.org/dc/terms/modified -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/modified"/>
<!-- http://purl.org/dc/terms/publisher -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/publisher"/>
<!-- http://purl.org/dc/terms/spatial -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/spatial"/>
<!-- http://purl.org/dc/terms/title -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/title"/>
<!-- http://purl.org/dc/terms/type -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/type"/>
<!-- http://schema.org/comment -->
<owl:AnnotationProperty rdf:about="http://schema.org/comment"/>
<!-- http://schema.org/rangeIncludes -->
<owl:AnnotationProperty rdf:about="http://schema.org/rangeIncludes"/>
<!-- http://semanticscience.org/resource/equivalentTo -->
<owl:AnnotationProperty rdf:about="http://semanticscience.org/resource/equivalentTo"/>
<!-- http://semanticscience.org/resource/subset -->
<owl:AnnotationProperty rdf:about="http://semanticscience.org/resource/subset"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDbXref -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDbXref"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDefinition -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDefinition"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasHumanReadableId -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasHumanReadableId"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#id -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
<!-- http://www.geneontology.org/formats/oboInOwl#inSubset -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
<!-- http://www.geneontology.org/formats/oboInOwl#isCyclic -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#isCyclic"/>
<!-- http://www.w3.org/2000/01/rdf-schema#comment -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#comment">
<rdfs:comment xml:lang="en"></rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://www.w3.org/ns/prov-o#"/>
</owl:AnnotationProperty>
<!-- http://www.w3.org/2003/06/sw-vocab-status/ns#term_status -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2003/06/sw-vocab-status/ns#term_status"/>
<!-- http://www.w3.org/2004/02/skos/core#altLabel -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#altLabel"/>
<!-- http://www.w3.org/2004/02/skos/core#changeNote -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#changeNote"/>
<!-- http://www.w3.org/2004/02/skos/core#definition -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#definition"/>
<!-- http://www.w3.org/2004/02/skos/core#editorialNote -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#editorialNote"/>
<!-- http://www.w3.org/2004/02/skos/core#example -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#example"/>
<!-- http://www.w3.org/2004/02/skos/core#scopeNote -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#scopeNote"/>
<!-- http://www.w3.org/ns/prov#category -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#category"/>
<!-- http://www.w3.org/ns/prov#component -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#component"/>
<!-- http://www.w3.org/ns/prov#constraints -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#constraints"/>
<!-- http://www.w3.org/ns/prov#definition -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#definition">
<rdfs:comment xml:lang="en">A definition quoted from PROV-DM or PROV-CONSTRAINTS that describes the concept expressed with this OWL term.</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://www.w3.org/ns/prov-o#"/>
</owl:AnnotationProperty>
<!-- http://www.w3.org/ns/prov#dm -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#dm">
<rdfs:comment xml:lang="en">A reference to the principal section of the PROV-DM document that describes this concept.</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://www.w3.org/ns/prov-o#"/>
</owl:AnnotationProperty>
<!-- http://www.w3.org/ns/prov#editorialNote -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#editorialNote"/>
<!-- http://www.w3.org/ns/prov#editorsDefinition -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#editorsDefinition"/>
<!-- http://www.w3.org/ns/prov#inverse -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#inverse"/>
<!-- http://www.w3.org/ns/prov#n -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#n"/>
<!-- http://www.w3.org/ns/prov#qualifiedForm -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#qualifiedForm"/>
<!-- http://www.w3.org/ns/prov#sharesDefinitionWith -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#sharesDefinitionWith"/>
<!-- http://www.w3.org/ns/prov#unqualifiedForm -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/ns/prov#unqualifiedForm"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Datatypes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://www.w3.org/2001/XMLSchema#date -->
<rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#date"/>
<!-- http://www.w3.org/2001/XMLSchema#duration -->
<rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#duration"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://edamontology.org/has_output -->
<owl:ObjectProperty rdf:about="http://edamontology.org/has_output">
<owl:inverseOf rdf:resource="http://edamontology.org/is_output_of"/>
<rdfs:domain rdf:resource="http://edamontology.org/operation_0004"/>
<rdfs:range rdf:resource="http://edamontology.org/data_0006"/>
<obo:is_anti_symmetric>false</obo:is_anti_symmetric>
<obo:is_reflexive>false</obo:is_reflexive>
<obo:is_symmetric>false</obo:is_symmetric>
<obo:transitive_over>OBO_REL:is_a</obo:transitive_over>
<oboInOwl:hasDefinition>'A has_output B' defines for the subject A, that it has the object B as a necessary or actual output or output argument.</oboInOwl:hasDefinition>
<oboInOwl:hasRelatedSynonym>OBO_REL:has_participant</oboInOwl:hasRelatedSynonym>
<oboInOwl:inSubset>edam</oboInOwl:inSubset>
<oboInOwl:inSubset>relations</oboInOwl:inSubset>
<oboInOwl:isCyclic>true</oboInOwl:isCyclic>
<rdfs:comment>Subject A can either be concept that is or has an 'Operation' function, or an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that has an 'Operation' function or is an 'Operation'. Object B can be any concept or entity. In EDAM, only 'has_output' is explicitly defined between EDAM concepts ('Operation' 'has_output' 'Data'). The inverse, 'is_output_of', is not explicitly defined.</rdfs:comment>
<rdfs:label>has output</rdfs:label>
<rdfs:seeAlso>"http://purl.obolibrary.org/obo/OBI_0000299"</rdfs:seeAlso>
<rdfs:seeAlso>http://wsio.org/has_output</rdfs:seeAlso>
</owl:ObjectProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/has_output"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<owl:annotatedTarget>OBO_REL:has_participant</owl:annotatedTarget>
<rdfs:comment>'OBO_REL:has_participant' is narrower in the sense that it only relates ontological categories (concepts) that are a 'process' (span:Process) with ontological categories that are a 'continuant' (snap:Continuant), and broader in the sense that it relates with any participating objects not just outputs or output arguments of the subject. It is also not clear whether an output (result) actually participates in the process that generates it.</rdfs:comment>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/has_output"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#isCyclic"/>
<owl:annotatedTarget>true</owl:annotatedTarget>
<rdfs:comment>In very unusual cases.</rdfs:comment>
</owl:Axiom>
<!-- http://edamontology.org/has_topic -->
<owl:ObjectProperty rdf:about="http://edamontology.org/has_topic">
<owl:inverseOf rdf:resource="http://edamontology.org/is_topic_of"/>
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://edamontology.org/data_0006"/>
<rdf:Description rdf:about="http://edamontology.org/operation_0004"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
<rdfs:range rdf:resource="http://edamontology.org/topic_0003"/>
<obo:is_anti_symmetric>false</obo:is_anti_symmetric>
<obo:is_reflexive>false</obo:is_reflexive>
<obo:is_symmetric>false</obo:is_symmetric>
<obo:transitive_over>OBO_REL:is_a</obo:transitive_over>
<oboInOwl:hasDefinition>'A has_topic B' defines for the subject A, that it has the object B as its topic (A is in the scope of a topic B).</oboInOwl:hasDefinition>
<oboInOwl:inSubset>edam</oboInOwl:inSubset>
<oboInOwl:inSubset>relations</oboInOwl:inSubset>
<oboInOwl:isCyclic>true</oboInOwl:isCyclic>
<rdfs:comment>Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated). Object B can either be a concept that is a 'Topic', or in unexpected cases an entity outside of an ontology that is a 'Topic' or is in the role of a 'Topic'. In EDAM, only 'has_topic' is explicitly defined between EDAM concepts ('Operation' or 'Data' 'has_topic' 'Topic'). The inverse, 'is_topic_of', is not explicitly defined.</rdfs:comment>
<rdfs:label>has topic</rdfs:label>
<rdfs:seeAlso>"http://purl.obolibrary.org/obo/IAO_0000136"</rdfs:seeAlso>
<rdfs:seeAlso>"http://purl.obolibrary.org/obo/OBI_0000298"</rdfs:seeAlso>
<rdfs:seeAlso>http://annotation-ontology.googlecode.com/svn/trunk/annotation-core.owl#hasTopic</rdfs:seeAlso>
<rdfs:seeAlso>http://www.loa-cnr.it/ontologies/DOLCE-Lite.owl#has-quality</rdfs:seeAlso>
</owl:ObjectProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/has_topic"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#isCyclic"/>
<owl:annotatedTarget>true</owl:annotatedTarget>
<rdfs:comment>In very unusual cases.</rdfs:comment>
</owl:Axiom>
<!-- http://edamontology.org/is_output_of -->
<owl:ObjectProperty rdf:about="http://edamontology.org/is_output_of">
<rdfs:domain rdf:resource="http://edamontology.org/data_0006"/>
<rdfs:range rdf:resource="http://edamontology.org/operation_0004"/>
<obo:is_anti_symmetric>false</obo:is_anti_symmetric>
<obo:is_reflexive>false</obo:is_reflexive>
<obo:is_symmetric>false</obo:is_symmetric>
<obo:transitive_over>OBO_REL:is_a</obo:transitive_over>
<oboInOwl:hasDefinition>'A is_output_of B' defines for the subject A, that it as a necessary or actual output or output argument of the object B.</oboInOwl:hasDefinition>
<oboInOwl:hasRelatedSynonym>OBO_REL:participates_in</oboInOwl:hasRelatedSynonym>
<oboInOwl:inSubset>edam</oboInOwl:inSubset>
<oboInOwl:inSubset>relations</oboInOwl:inSubset>
<oboInOwl:isCyclic>true</oboInOwl:isCyclic>
<rdfs:comment>Subject A can be any concept or entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated). Object B can either be a concept that is or has an 'Operation' function, or an entity outside of an ontology that has an 'Operation' function or is an 'Operation'. In EDAM, 'is_output_of' is not explicitly defined between EDAM concepts, only the inverse 'has_output'.</rdfs:comment>
<rdfs:label>is output of</rdfs:label>
<rdfs:seeAlso>"http://purl.obolibrary.org/obo/OBI_0000312"</rdfs:seeAlso>
<rdfs:seeAlso>http://wsio.org/is_output_of</rdfs:seeAlso>
</owl:ObjectProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/is_output_of"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<owl:annotatedTarget>OBO_REL:participates_in</owl:annotatedTarget>
<rdfs:comment>'OBO_REL:participates_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'continuant' (snap:Continuant) with ontological categories that are a 'process' (span:Process), and broader in the sense that it relates any participating subjects not just outputs or output arguments. It is also not clear whether an output (result) actually participates in the process that generates it.</rdfs:comment>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/is_output_of"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#isCyclic"/>
<owl:annotatedTarget>true</owl:annotatedTarget>
<rdfs:comment>In very unusual cases.</rdfs:comment>
</owl:Axiom>
<!-- http://edamontology.org/is_topic_of -->
<owl:ObjectProperty rdf:about="http://edamontology.org/is_topic_of">
<rdfs:domain rdf:resource="http://edamontology.org/topic_0003"/>
<rdfs:range>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://edamontology.org/data_0006"/>
<rdf:Description rdf:about="http://edamontology.org/operation_0004"/>
</owl:unionOf>
</owl:Class>
</rdfs:range>
<obo:is_anti_symmetric>false</obo:is_anti_symmetric>
<obo:is_reflexive>false</obo:is_reflexive>
<obo:is_symmetric>false</obo:is_symmetric>
<obo:transitive_over>OBO_REL:is_a</obo:transitive_over>
<oboInOwl:hasDefinition>'A is_topic_of B' defines for the subject A, that it is a topic of the object B (a topic A is the scope of B).</oboInOwl:hasDefinition>
<oboInOwl:hasRelatedSynonym>OBO_REL:quality_of</oboInOwl:hasRelatedSynonym>
<oboInOwl:inSubset>edam</oboInOwl:inSubset>
<oboInOwl:inSubset>relations</oboInOwl:inSubset>
<oboInOwl:isCyclic>true</oboInOwl:isCyclic>
<rdfs:comment>Subject A can either be a concept that is a 'Topic', or in unexpected cases an entity outside of an ontology (or an ontology concept in a role of an entity being semantically annotated) that is a 'Topic' or is in the role of a 'Topic'. Object B can be any concept or entity outside of an ontology. In EDAM, 'is_topic_of' is not explicitly defined between EDAM concepts, only the inverse 'has_topic'.</rdfs:comment>
<rdfs:label>is topic of</rdfs:label>
<rdfs:seeAlso>http://www.loa-cnr.it/ontologies/DOLCE-Lite.owl#inherent-in</rdfs:seeAlso>
</owl:ObjectProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/is_topic_of"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<owl:annotatedTarget>OBO_REL:quality_of</owl:annotatedTarget>
<rdfs:comment>Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:quality_of' might be seen narrower in the sense that it only relates subjects that are a 'quality' (snap:Quality) with objects that are an 'independent_continuant' (snap:IndependentContinuant), and is broader in the sense that it relates any qualities of the object.</rdfs:comment>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://edamontology.org/is_topic_of"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#isCyclic"/>
<owl:annotatedTarget>true</owl:annotatedTarget>
<rdfs:comment>In very unusual cases.</rdfs:comment>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/IAO_0000136 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000136">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<obo:IAO_0000112 xml:lang="en">This document is about information artifacts and their representations</obo:IAO_0000112>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">A (currently) primitive relation that relates an information artifact to an entity.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of "mentions" relation. Weaken the is_about relationship to be primitive.
We will try to build it back up by elaborating the various subproperties that are more precisely defined.
Some currently missing phenomena that should be considered "about" are predications - "The only person who knows the answer is sitting beside me" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic.</obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Smith, Ceusters, Ruttenberg, 2000 years of philosophy</obo:IAO_0000119>
<rdfs:label xml:lang="en">is about</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000052 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000052">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#FunctionalProperty"/>
<obo:IAO_0000111 xml:lang="en">inheres in</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this fragility is a characteristic of this vase</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this red color is a characteristic of this apple</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.</obo:IAO_0000115>
<obo:IAO_0000118 xml:lang="en">inheres_in</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:comment>Note that this relation was previously called "inheres in", but was changed to be called "characteristic of" because BFO2 uses "inheres in" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing.</rdfs:comment>
<rdfs:label xml:lang="en">characteristic of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000053 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000053">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#InverseFunctionalProperty"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<obo:IAO_0000111 xml:lang="en">bearer of</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this apple is bearer of this red color</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this vase is bearer of this fragility</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">Inverse of characteristic_of</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many dependents, and its dependents can exist for different periods of time, but none of its dependents can exist when the bearer does not exist.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">bearer_of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">is bearer of</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">has characteristic</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000079 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000079">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000085"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000034"/>
<obo:IAO_0000112 xml:lang="en">this catalysis function is a function of this enzyme</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A function inheres in its bearer at all times for which the function exists, however the function need not be realized at all the times that the function exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">function_of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">is function of</obo:IAO_0000118>
<rdfs:comment>This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.</rdfs:comment>
<rdfs:label xml:lang="en">function of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000080 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000080">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000086"/>
<obo:IAO_0000112 xml:lang="en">this red color is a quality of this apple</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A quality inheres in its bearer at all times for which the quality exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">is quality of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">quality_of</obo:IAO_0000118>
<rdfs:comment>This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.</rdfs:comment>
<rdfs:label xml:lang="en">quality of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000081 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000081">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<obo:IAO_0000112 xml:lang="en">this investigator role is a role of this person</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A role inheres in its bearer at all times for which the role exists, however the role need not be realized at all the times that the role exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">is role of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">role_of</obo:IAO_0000118>
<rdfs:comment>This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.</rdfs:comment>
<rdfs:label xml:lang="en">role of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000085 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000085">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000034"/>
<obo:IAO_0000112 xml:lang="en">this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many functions, and its functions can exist for different periods of time, but none of its functions can exist when the bearer does not exist. A function need not be realized at all the times that the function exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_function</obo:IAO_0000118>
<rdfs:label xml:lang="en">has function</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000086 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000086">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<obo:IAO_0000112 xml:lang="en">this apple has quality this red color</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_quality</obo:IAO_0000118>
<rdfs:label xml:lang="en">has quality</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000087 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000087">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<obo:IAO_0000112 xml:lang="en">this person has role this investigator role (more colloquially: this person has this role of investigator)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_role</obo:IAO_0000118>
<rdfs:label xml:lang="en">has role</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000091 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000091">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000092"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence</obo:IAO_0000115>
<rdfs:label xml:lang="en">has disposition</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000092 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000092">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<rdfs:comment>This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.</rdfs:comment>
<rdfs:label xml:lang="en">disposition of</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000001 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000001">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
<rdfs:domain rdf:resource="http://semanticscience.org/resource/SIO_000000"/>
<rdfs:range rdf:resource="http://semanticscience.org/resource/SIO_000000"/>
<dc:identifier>SIO_000001</dc:identifier>
<terms:description xml:lang="en">A is related to B iff there is some relation between A and B.</terms:description>
<schema:comment>'is related to' is the top level relation in SIO</schema:comment>
<resource:subset>core</resource:subset>
<resource:subset>relations+</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">is related to</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000028 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000028">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000145"/>
<owl:inverseOf rdf:resource="http://semanticscience.org/resource/SIO_000068"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ReflexiveProperty"/>
<dc:identifier>SIO_000028</dc:identifier>
<terms:description xml:lang="en">has part is a transitive, reflexive and antisymmetric relation between a whole and itself or a whole and its part.</terms:description>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">has part</rdfs:label>
<skos:example xml:lang="en">a collection of cars has as a car as a part;a car has an engine as a part; a car has a piston as a part;</skos:example>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000061 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000061">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000322"/>
<owl:inverseOf rdf:resource="http://semanticscience.org/resource/SIO_000145"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<dc:identifier>SIO_000061</dc:identifier>
<terms:description xml:lang="en">A is located in B iff the spatialtemporial region occupied by A is part of the spatialtemporal region occupied by B. [T][R]</terms:description>
<resource:equivalentTo>OBO_REL:located_in</resource:equivalentTo>
<resource:subset>core</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">is located in</rdfs:label>
<skos:example xml:lang="en">A parasite in the interior of a person's intestine is located in their intestinal lumen.</skos:example>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000068 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000068">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000061"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ReflexiveProperty"/>
<dc:identifier>SIO_000068</dc:identifier>
<terms:description xml:lang="en">is part of is a transitive, reflexive and anti-symmetric mereological relation between a whole and itself or a part and its whole.</terms:description>
<resource:equivalentTo>OBO_REL:part_of</resource:equivalentTo>
<resource:subset>core</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">is part of</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000145 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000145">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000322"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<dc:identifier>SIO_000145</dc:identifier>
<terms:description xml:lang="en">A is location of B iff the spatialtemporal region occupied by A has the spatialtemporal region occupied by B as a part. [T][R]</terms:description>
<resource:subset>nlp+</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">is location of</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000212 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000212">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000001"/>
<owl:inverseOf rdf:resource="http://semanticscience.org/resource/SIO_000628"/>
<dc:identifier>SIO_000212</dc:identifier>
<terms:description xml:lang="en">A is referred to by B iff B is an informational entity that makes reference to A.</terms:description>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">is referred to by</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000322 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000322">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000001"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
<dc:identifier>SIO_000322</dc:identifier>
<terms:description xml:lang="en">A is spatiotemporally related to B iff A is in the spatial or temporal vicinity of B</terms:description>
<resource:subset>core</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">is spatiotemporally related to</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000325 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000325">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000322"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ReflexiveProperty"/>
<owl:propertyChainAxiom rdf:parseType="Collection">
<rdf:Description rdf:about="http://semanticscience.org/resource/SIO_000325"/>
<rdf:Description rdf:about="http://semanticscience.org/resource/SIO_000068"/>
</owl:propertyChainAxiom>
<dc:identifier>SIO_000325</dc:identifier>
<terms:description xml:lang="en">A overlaps with B iff there is some C that is part of both A and B. [S][R]</terms:description>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">overlaps with</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000628 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000628">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000001"/>
<dc:identifier>SIO_000628</dc:identifier>
<terms:description xml:lang="en">refers to is a relation between one entity and the entity that it makes reference to.</terms:description>
<resource:subset>core</resource:subset>
<resource:subset>nlp+</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">refers to</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000668 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000668">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000628"/>
<owl:inverseOf rdf:resource="http://semanticscience.org/resource/SIO_000892"/>
<dc:identifier>SIO_000668</dc:identifier>
<terms:description xml:lang="en">in relation to is a comparative relation to indicate that the instance of the class holding the relation exists in relation to another entity.</terms:description>
<resource:subset>core</resource:subset>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">in relation to</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_000892 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_000892">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000212"/>
<dc:identifier>SIO_000892</dc:identifier>
<terms:description xml:lang="en">a in relation from b is a comparative relation in a is the object of reference in a relation with b. </terms:description>
<rdfs:isDefinedBy rdf:resource="http://semanticscience.org/ontology/sio.owl"/>
<rdfs:label xml:lang="en">in relation from</rdfs:label>
</owl:ObjectProperty>
<!-- http://www.w3.org/2004/02/skos/core#broadMatch -->
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#broadMatch">
<rdfs:subPropertyOf rdf:resource="http://www.w3.org/2004/02/skos/core#broader"/>
<rdfs:subPropertyOf rdf:resource="http://www.w3.org/2004/02/skos/core#mappingRelation"/>
<owl:inverseOf rdf:resource="http://www.w3.org/2004/02/skos/core#narrowMatch"/>
<rdfs:isDefinedBy rdf:resource="http://www.w3.org/2004/02/skos/core"/>
<rdfs:label xml:lang="en">has broader match</rdfs:label>