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readme.py
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readme.py
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# imports
import os
import json
import glob
import argparse
# define functions
def main(args):
# get list of notebooks
notebooks = sorted(glob.glob("**/*.ipynb", recursive=True))
# make all notebooks consistent
modify_notebooks(notebooks)
# get list of directories
notebook_dirs = sorted(glob.glob("*/", recursive=True))
# write workflows
write_workflows(notebook_dirs)
# read existing README.md
with open("README.md", "r") as f:
readme_before = f.read()
# write README.md
write_readme(notebook_dirs)
# read modified README.md
with open("README.md", "r") as f:
readme_after = f.read()
# check if readme matches
if args.check_readme:
if not check_readme(readme_before, readme_after):
print("README.md file did not match...")
exit(2)
# format code
format_code()
def format_code():
# TODO - update here
pass
# os.system("black .")
# os.system("black-nb --clear-output .")
def write_readme(notebook_dirs):
# read in prefix.md and suffix.md
with open("prefix.md", "r") as f:
prefix = f.read()
with open("suffix.md", "r") as f:
suffix = f.read()
# define markdown tables
notebook_table = (
"\n**Notebooks**\n\ndirectory|notebooks|status|description\n-|-|-|-\n"
)
# process notebooks
for notebook_dir in notebook_dirs:
# get list of notebooks
notebooks = sorted(glob.glob(f"{notebook_dir}/*.ipynb"))
notebooks = [notebook.split("/")[-1] for notebook in notebooks]
# get notebook name
name = notebook_dir.strip("/")
# build entries for notebook table
status = f"[![{name}](https://github.com/Azure/azureml-examples/workflows/notebooks-{name}/badge.svg?branch=main)](https://github.com/Azure/azureml-examples/actions/workflows/notebooks-{name}.yml)"
# read description if given in README
description = "*no description*"
try:
with open(f"{notebook_dir}/README.md", "r") as f:
for line in f.readlines():
if "description: " in str(line):
description = line.split(": ")[-1].strip()
break
except:
pass
# add row to notebook table
row = f"[{name}]({name})|{'<br>'.join(notebooks)}|{status}|{description}\n"
notebook_table += row
# write README.md
print("writing README.md...")
with open("README.md", "w") as f:
f.write(prefix + notebook_table + suffix)
def write_workflows(notebook_dirs):
# process notebooks
for notebook_dir in notebook_dirs:
# read is_parallel if given in README
is_parallel = False
try:
with open(f"{notebook_dir}/README.md", "r") as f:
for line in f.readlines():
if "is_parallel: " in str(line):
is_parallel = bool(line.split(": ")[-1].strip())
break
except:
pass
# write workflow file
if is_parallel:
write_notebook_workflow_parallel(notebook_dir)
else:
write_notebook_workflow_sequential(notebook_dir)
def check_readme(before, after):
return before == after
def modify_notebooks(notebooks):
# setup variables
kernelspec = {
"display_name": "Python 3.8 - AzureML",
"language": "python",
"name": "python38-azureml",
}
# for each notebooks
for notebook in notebooks:
# read in notebook
with open(notebook, "r") as f:
data = json.load(f)
# update metadata
data["metadata"]["kernelspec"] = kernelspec
# write notebook
with open(notebook, "w") as f:
json.dump(data, f, indent=1)
def write_notebook_workflow_sequential(notebook_dir):
notebook_dir = notebook_dir.strip("/")
notebooks = sorted(glob.glob(f"{notebook_dir}/*.ipynb"))
notebooks = [notebook.split("/")[-1] for notebook in notebooks]
creds = "${{secrets.AZ_CREDS}}"
workflow_yaml = f"""name: notebooks-{notebook_dir}
on:
schedule:
- cron: "0 */8 * * *"
pull_request:
branches:
- main
paths:
- notebooks/{notebook_dir}/**
- .github/workflows/notebooks-{notebook_dir}.yml
- notebooks/dev-requirements.txt
jobs:
build:
runs-on: ubuntu-latest
steps:
- name: check out repo
uses: actions/checkout@v2
- name: setup python
uses: actions/setup-python@v2
with:
python-version: "3.8"
- name: Run Install packages
run: |
chmod +x ./scripts/install-packages.sh
./scripts/install-packages.sh
shell: bash
- name: pip install notebook reqs
run: pip install -r notebooks/dev-requirements.txt
- name: azure login
uses: azure/login@v1
with:
creds: {creds}
- name: Run update-azure-extensions
run: |
chmod +x ./scripts/update-azure-extensions.sh
./scripts/update-azure-extensions.sh
shell: bash
- name: attach to workspace
run: az ml folder attach -w main-python-sdk -g azureml-examples"""
for notebook in notebooks:
workflow_yaml += f"""
- name: run {notebook}
run: papermill {notebook} - -k python
working-directory: notebooks/{notebook_dir}\n"""
# write workflow
with open(f"../.github/workflows/notebooks-{notebook_dir}.yml", "w") as f:
f.write(workflow_yaml)
def write_notebook_workflow_parallel(notebook_dir):
notebook_dir = notebook_dir.strip("/")
notebooks = sorted(glob.glob(f"{notebook_dir}/*.ipynb"))
notebooks = [notebook.split("/")[-1] for notebook in notebooks]
matrix_notebook = "${{matrix.notebook}}"
creds = "${{secrets.AZ_CREDS}}"
workflow_yaml = f"""name: notebooks-{notebook_dir}
on:
schedule:
- cron: "0 */8 * * *"
pull_request:
branches:
- main
paths:
- notebooks/{notebook_dir}/**
- .github/workflows/notebooks-{notebook_dir}.yml
- notebooks/dev-requirements.txt
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
notebook: {notebooks}
steps:
- name: check out repo
uses: actions/checkout@v2
- name: setup python
uses: actions/setup-python@v2
with:
python-version: "3.8"
- name: Run Install packages
run: |
chmod +x ./scripts/install-packages.sh
./scripts/install-packages.sh
shell: bash
- name: pip install notebook reqs
run: pip install -r notebooks/dev-requirements.txt
- name: azure login
uses: azure/login@v1
with:
creds: {creds}
- name: Run update-azure-extensions
run: |
chmod +x ./scripts/update-azure-extensions.sh
./scripts/update-azure-extensions.sh
shell: bash
- name: attach to workspace
run: az ml folder attach -w main-python-sdk -g azureml-examples
- name: run {matrix_notebook}
run: papermill {matrix_notebook} - -k python
working-directory: notebooks/{notebook_dir}\n"""
# write workflow
with open(f"../.github/workflows/notebooks-{notebook_dir}.yml", "w") as f:
f.write(workflow_yaml)
# run functions
if __name__ == "__main__":
# issue #146
if "posix" not in os.name:
print(
"windows is not supported, see issue #146 (https://github.com/Azure/azureml-examples/issues/146)"
)
exit(1)
# setup argparse
parser = argparse.ArgumentParser()
parser.add_argument("--check-readme", type=bool, default=False)
args = parser.parse_args()
# call main
main(args)