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Team 19 - We Need More Than Attention (WENMA)

Placed 2nd out of 38 teams in NYU Deep Learning final project in Fall 2023.

Instructions

Setup

  1. Installing pip packages

The following packages are required to run the code. Training and inference is done on Ubuntu 22.04 machines using Python 3.10.12. This setup should work on any Linux machine with recent versions of Python.

torch==2.1.1
torchvision==0.16.1
pytorch-lightning==2.1.2
numpy==1.26.1
tqdm
matplotlib==3.8.2
wandb==0.16.0
imageio==2.33.0
  1. Installing OpenSTL

We use OpenSTL for the implementation of SimVP. To install OpenSTL, run the following commands:

  • In a suitable directory, clone the OpenSTL repository:
git clone git@github.com:chengtan9907/OpenSTL.git
  • Install OpenSTL:
cd <path_to_OpenSTL>
pip install -e .
  1. Wandb setup

We use wandb for logging. To setup wandb, run the following commands:

wandb login

Now, you can start training the models.

Training and Inference

  1. Place the data (or symlink) it to data/Dataset_Student. This directory should contain train, val and unlabeled folders.

  2. The first step is to train a UNet with these data: python3 train_unet.py. This will save the model in checkpoints/unet9.pt.

  3. Now, we can generate masks from the data.

  • To generate masks for train and val splits, run python generate_masks.py --model_checkpoint checkpoints/unet9.pt --data_root data/Dataset_Student --split <train, val> --output_file <data/DL/train_masks.pt, data/DL/val_masks.pt>

  • For training the world model on the labeled data only, you can run for train and val splits.

  • For this step, we also need to merge all ground truth masks into one file. To do this, run python merge_masks.py --data_root data/Dataset_Student --split <train, val> --output_file <data/DL/train_gt_masks.pt, data/DL/val_gt_masks.pt> for train and val splits.

Or, you can get the pre-generated masks from here (this link requires an NYU account):

Split Link
Train Link
Validation Link
  1. Now, we can train our prediction model on the generated masks.

  • For training only on labeled set: python3 train_simvp.py --downsample --in_shape 11 49 160 240 --lr 1e-3 --pre_seq_len=11 --aft_seq_len=1 --max_epochs 20 --batch_size 4 --check_val_every_n_epoch=1

  • To train on labeled and unlabeled set, generate masks for unlabeled and add --unlabeled flag.

  1. Now, we can finetune with scheduled sampling.

python3 train_simvp_ss.py --simvp_path checkpoints/simvp_epoch=16-val_loss=0.014.ckpt --sample_step_inc_every_n_epoch 20 --max_epochs 100 --batch_size 4 --check_val_every_n_epoch 2

We used the checkpoint after second epoch of scheduled sampling for our final submission. The checkpoints are here:

Checkpoints

Name Link
Best w/o scheduled sampling Link
Best after Link
  1. To generate predictions on the hidden set, run this notebook: nbs/96_get_results_combined_with_unet.ipynb

The final predictions are here.