diff --git a/R/dist_spec.R b/R/dist_spec.R
index 5498481df..c992aaca7 100644
--- a/R/dist_spec.R
+++ b/R/dist_spec.R
@@ -20,10 +20,10 @@
 #' Charniga, K., et al. “Best practices for estimating and reporting
 #'   epidemiological delay distributions of infectious diseases using public
 #'   health surveillance and healthcare data”, *arXiv e-prints*, 2024.
-#'   <https://doi.org/10.48550/arXiv.2405.08841>
+#'   \doi{10.48550/arXiv.2405.08841}
 #' Park,  S. W.,  et al.,  "Estimating epidemiological delay distributions for
 #'   infectious diseases", *medRxiv*, 2024.
-#'   <https://doi.org/10.1101/2024.01.12.24301247>
+#'   \doi{<https://doi.org/10.1101/2024.01.12.24301247}
 #'
 #' @param distribution A character string representing the distribution to be
 #'   used (one of "exp", "gamma", "lognormal", "normal" or "fixed")
diff --git a/R/opts.R b/R/opts.R
index 9107da6d4..bd94a2ec4 100644
--- a/R/opts.R
+++ b/R/opts.R
@@ -571,7 +571,7 @@ gp_opts <- function(basis_prop = 0.2,
 #'   `familiy` is "negbin". Can be supplied either as a single numeric value
 #'   (fixed overdispersion) or a list with numeric elements mean (`mean`) and
 #'   standard deviation (`sd`) defining a normally distributed prior.
-#'   Internally parametersed such that the overedispersion is one over the
+#'   Internally parameterised such that the overdispersion is one over the
 #'   square of this prior overdispersion. Defaults to a list with elements
 #'   `mean = 0` and `sd = 0.25`.
 #' @param weight Numeric, defaults to 1. Weight to give the observed data in the
diff --git a/README.Rmd b/README.Rmd
index 6bd56110c..91c57434b 100644
--- a/README.Rmd
+++ b/README.Rmd
@@ -15,7 +15,7 @@ knitr::opts_chunk$set(
 
 [![Lifecycle: maturing](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://lifecycle.r-lib.org/articles/stages.html#maturing) [![R-CMD-check](https://github.com/epiforecasts/EpiNow2/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/epiforecasts/EpiNow2/actions/workflows/R-CMD-check.yaml) [![codecov](https://codecov.io/gh/epiforecasts/EpiNow2/branch/main/graph/badge.svg?token=FZWwEMdpq6)](https://app.codecov.io/gh/epiforecasts/EpiNow2) [![metacran downloads](http://cranlogs.r-pkg.org/badges/grand-total/EpiNow2?color=ff69b4)](https://cran.r-project.org/package=EpiNow2)
 
-[![MIT license](https://img.shields.io/badge/License-MIT-blue.svg)](https://github.com/epiforecasts/EpiNow2/blob/main/LICENSE.md/)   [![GitHub contributors](https://img.shields.io/github/contributors/epiforecasts/EpiNow2)](https://github.com/epiforecasts/EpiNow2/graphs/contributors)  [![universe](https://epiforecasts.r-universe.dev/badges/EpiNow2)](http://epiforecasts.r-universe.dev/ui/#package:EpiNow2) [![GitHub commits](https://img.shields.io/github/commits-since/epiforecasts/EpiNow2/v1.4.0.svg?color=orange)](https://GitHub.com/epiforecasts/EpiNow2/commit/main/) [![DOI](https://zenodo.org/badge/272995211.svg)](https://zenodo.org/badge/latestdoi/272995211)
+[![MIT license](https://img.shields.io/badge/License-MIT-blue.svg)](https://github.com/epiforecasts/EpiNow2/blob/main/LICENSE.md/)   [![GitHub contributors](https://img.shields.io/github/contributors/epiforecasts/EpiNow2)](https://github.com/epiforecasts/EpiNow2/graphs/contributors)  [![universe](https://epiforecasts.r-universe.dev/badges/EpiNow2)](http://epiforecasts.r-universe.dev/#package:EpiNow2) [![GitHub commits](https://img.shields.io/github/commits-since/epiforecasts/EpiNow2/v1.4.0.svg?color=orange)](https://GitHub.com/epiforecasts/EpiNow2/commit/main/) [![DOI](https://zenodo.org/badge/272995211.svg)](https://zenodo.org/badge/latestdoi/272995211)
 
 ## Summary
 
diff --git a/man/discrete_pmf.Rd b/man/discrete_pmf.Rd
index 9783580d8..29c55d4f9 100644
--- a/man/discrete_pmf.Rd
+++ b/man/discrete_pmf.Rd
@@ -53,9 +53,9 @@ from the difference of two censored events.
 Charniga, K., et al. “Best practices for estimating and reporting
 epidemiological delay distributions of infectious diseases using public
 health surveillance and healthcare data”, \emph{arXiv e-prints}, 2024.
-\url{https://doi.org/10.48550/arXiv.2405.08841}
+\doi{10.48550/arXiv.2405.08841}
 Park,  S. W.,  et al.,  "Estimating epidemiological delay distributions for
 infectious diseases", \emph{medRxiv}, 2024.
-\url{https://doi.org/10.1101/2024.01.12.24301247}
+\doi{<https://doi.org/10.1101/2024.01.12.24301247}
 }
 \keyword{internal}
diff --git a/man/discretise.Rd b/man/discretise.Rd
index 8bda63c1a..71ab9bada 100644
--- a/man/discretise.Rd
+++ b/man/discretise.Rd
@@ -52,8 +52,8 @@ discretise(dist1 + dist2, strict = FALSE)
 Charniga, K., et al. “Best practices for estimating and reporting
 epidemiological delay distributions of infectious diseases using public
 health surveillance and healthcare data”, \emph{arXiv e-prints}, 2024.
-\url{https://doi.org/10.48550/arXiv.2405.08841}
+\doi{10.48550/arXiv.2405.08841}
 Park,  S. W.,  et al.,  "Estimating epidemiological delay distributions for
 infectious diseases", \emph{medRxiv}, 2024.
-\url{https://doi.org/10.1101/2024.01.12.24301247}
+\doi{<https://doi.org/10.1101/2024.01.12.24301247}
 }
diff --git a/man/obs_opts.Rd b/man/obs_opts.Rd
index 66a3b10dc..36f1d9ed2 100644
--- a/man/obs_opts.Rd
+++ b/man/obs_opts.Rd
@@ -24,7 +24,7 @@ Negative binomial ("negbin"), the default, and Poisson.}
 \code{familiy} is "negbin". Can be supplied either as a single numeric value
 (fixed overdispersion) or a list with numeric elements mean (\code{mean}) and
 standard deviation (\code{sd}) defining a normally distributed prior.
-Internally parametersed such that the overedispersion is one over the
+Internally parameterised such that the overdispersion is one over the
 square of this prior overdispersion. Defaults to a list with elements
 \code{mean = 0} and \code{sd = 0.25}.}