setup.py

from setuptools import find_packages, setup
from glob import glob

classes = """
    Development Status :: 5 - Production/Stable
    License :: OSI Approved :: BSD License
    Topic :: Software Development :: Libraries
    Topic :: Scientific/Engineering
    Topic :: Scientific/Engineering :: Bio-Informatics
    Programming Language :: Python :: 3
    Programming Language :: Python :: 3 :: Only
    Programming Language :: Python :: 3.4
    Programming Language :: Python :: 3.5
    Programming Language :: Python :: 3.6
    Programming Language :: Python :: 3.7
    Operating System :: Unix
    Operating System :: POSIX
    Operating System :: MacOS :: MacOS X
"""
classifiers = [s.strip() for s in classes.split('\n') if s]

description = ('Deep Sequence Alignments.')


setup(name='deepblast',
      version='1.0.3',
      license='BSD-3-Clause',
      description=description,
      author_email="jamietmorton@gmail.com",
      maintainer_email="jamietmorton@gmail.com",
      packages=find_packages(),
      install_requires=[
          'numpy',
          'scipy',
          'pandas',
          'torch>=1.4',
          'scikit-learn',
          'numba',
          'pytorch-lightning>=0.8.1',
          'matplotlib',
          'pillow',
          'biopython>=1.78,<2.0',
          'transformers',
          'sentencepiece',
          'tensorboard'
      ],
      scripts=glob('scripts/*'),
      classifiers=classifiers,
)