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.zenodo.json
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{
"description": "<p>As part of the <a href=\"http://indico.ictp.it/event/8706/\">CODATA-RDA Research Data Science Summer School in Trieste (5-16 Aug 2019)</a>, ELIXIR Training has contributed in the organization of the flanking Advanced Bioinformatics workshop (19-23 Aug 2019) with a particular focus on Machine Learning applications, as part of the ELIXIR Implementation Study on Learning Paths.</p>\n<p>This advanced bioinformatics course provided an overview of the current status of different NGS workflows (variant calling, RNA-Seq, etc), and combined them with the appropriate Machine Learning and Data Mining approaches. After providing a strong foundation of the underlying theory and concepts, the course relied heavily on hand-on exercises and tutorials in order for the participants to directly apply and practice on methods and techniques presented throughout each day.</p>\n<p>The material is organized into four days / modules:</p>\n<ol>\n<li>Experimental Design and Statistics</li>\n<li>Introduction to basic NGS pipelines</li>\n<li>Machine Learning and Data Mining in Bioinformatics</li>\n<li>Introduction to Workflows and Nextflow</li>\n</ol>\n<p>All content has been designed to work with the <a href=\"https://readthedocs.org/\">readthedocs</a> platform, with the rendered site being available <a href=\"https://codata-rda-advanced-bioinformatics-2019.readthedocs.io\">here</a>.</p>",
"license": "CC-BY-4.0",
"title": "ELIXIR / CODATA-RDA Research Data Science Advanced Workshop on Bioinformatics",
"version": "v1.0.0",
"upload_type": "software",
"publication_date": "2019-09-01",
"creators": [
{
"affiliation": "H3ABioNet",
"name": "Amel Ghouila",
"orcid": "0000-0002-1597-1841"
},
{
"affiliation": "Institute of Applied Biosciences - CERTH, GR",
"name": "Maria Tsagiopoulou",
"orcid": "0000-0002-1653-0327"
},
{
"affiliation": "Sydney Brenner Institute for Molecular Bioscience, University of the Witwatersrand, Johannesburg, South Africa",
"name": "Phelelani Thokozani Mpangase",
"orcid": "0000-0001-8280-8940"
},
{
"affiliation": "Sydney Brenner Institute for Molecular Bioscience, University of the Witwatersrand, Johannesburg, South Africa",
"name": "Scott Hazelhurst",
"orcid": "0000-0002-7813-7918"
},
{
"affiliation": "Institute of Applied Biosciences - CERTH, GR",
"name": "Fotis E. Psomopoulos",
"orcid": "0000-0002-0222-4273"
}
],
"access_right": "open"
}