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Week 4: DNA Alignment Fundamentals

This week, we cover some basics of how sequence is generated, delve into the details of data and formats, and talk through basic QC of your sequence.

Homework Assignment

Let's play around with some real sequence data and align it, working in a jupyter notebook. (Note that jupyter is only one way to run these commands. The same steps would work directly from a unix terminal prompt). Ask for help in the #bfx_workshop slack channel if you get stuck!

For-credit students: Send Jenny the answers to the question near the end: @RG and @PG tags - What do those stand for? How many tag lines do you see?