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Provide easy execution of data cleaning code #52

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MagicMilly opened this issue Apr 9, 2020 · 5 comments
Closed
1 task

Provide easy execution of data cleaning code #52

MagicMilly opened this issue Apr 9, 2020 · 5 comments
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@MagicMilly

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@MagicMilly
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MagicMilly commented Apr 9, 2020 •
edited by dlebauer
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Goal: Make it easier for collaborators / researchers to reproduce and run data cleaning code in notebooks

Steps

  • Put everything in one repository, with README saying what needs to be done
    • Use static input data files for now, later can replace w/ downloading
    • then lets review with Tyson and Ryan re next steps
@MagicMilly MagicMilly self-assigned this Apr 9, 2020
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Moving to next Sprint (binder button or other easy execution of notebook / script)

@MagicMilly MagicMilly changed the title Add binder button for easy execution of data cleaning notebooks Provide easy execution of data cleaning code May 7, 2020
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Having difficulty with binder and input files, but am converting notebooks to scripts for the Data Repo, so am looking at other options that will be easy for others to use.

@MagicMilly MagicMilly mentioned this issue May 7, 2020
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@rbartelme has helped me with examples of CLI arguments, working with static data living on CyVerse. This should be done by the end of this Sprint, and for Sprint 36 I can incorporate pulling updated / dynamic data into the script.

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Need to talk to David about this during our 1:1 on 2020-06-08

@dlebauer dlebauer removed this from the Sprint 35 (May 25 - Jun 7, 2020) milestone Jun 8, 2020
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Removing points and closing issue due to newer, more specific tickets being worked on now like Issue #109

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