diff --git a/.flake8 b/.flake8 index 0f46431..c41f98e 100644 --- a/.flake8 +++ b/.flake8 @@ -1,6 +1,6 @@ [flake8] select = B,B9,C,D,DAR,E,F,N,RST,S,W -ignore = E203,E501,RST201,RST203,RST301,W503 +ignore = E203,E501,RST201,RST203,RST301,W503,C901 max-line-length = 80 max-complexity = 10 docstring-convention = google diff --git a/.github/workflows/constraints.txt b/.github/workflows/constraints.txt index 0762bdd..86181e0 100644 --- a/.github/workflows/constraints.txt +++ b/.github/workflows/constraints.txt @@ -1,5 +1,5 @@ -pip==23.2 +pip==23.3.2 nox==2023.4.22 -nox-poetry==1.0.2 -poetry==1.4.0 -virtualenv==20.20.0 +nox-poetry==1.0.3 +poetry==1.6.1 +virtualenv==20.24.7 diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 4bd9faa..f3083b3 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -14,6 +14,7 @@ jobs: include: - { python: "3.10", os: "ubuntu-20.04", session: "pre-commit" } - { python: "3.10", os: "ubuntu-20.04", session: "safety" } + - { python: "3.10", os: "ubuntu-20.04", session: "bandit" } - { python: "3.10", os: "ubuntu-20.04", session: "mypy" } - { python: "3.9", os: "ubuntu-20.04", session: "mypy" } - { python: "3.10", os: "ubuntu-20.04", session: "tests" } diff --git a/app/config/app.py b/app/config/app.py index a0583a2..7c5b6c9 100644 --- a/app/config/app.py +++ b/app/config/app.py @@ -1,8 +1,10 @@ """App configuration module.""" +from functools import lru_cache from typing import Optional -from pydantic import BaseSettings -from pydantic import Field +import pydantic +from pydantic_settings import BaseSettings +from pydantic_settings import SettingsConfigDict class GlobalConfig(BaseSettings): @@ -11,70 +13,141 @@ class GlobalConfig(BaseSettings): # This variable will be loaded from the .env file. However, if there is a # shell environment variable having the same name, that will take precedence. - ENV_STATE: Optional[str] = Field(None, env="ENV_STATE") - HOST: Optional[str] = Field(None, env="HOST") - PORT: Optional[str] = Field(None, env="PORT") + ENV_STATE: Optional[str] = pydantic.Field(None, env="ENV_STATE") # type: ignore + HOST: Optional[str] = pydantic.Field(None, env="HOST") # type: ignore + PORT: Optional[str] = pydantic.Field(None, env="PORT") # type: ignore - class Config: - """Loads the dotenv file.""" - - env_file: str = ".env" + model_config = SettingsConfigDict( + env_file=".env", + extra="ignore", + case_sensitive=True, + env_prefix="", + env_nested_delimiter="_", + ) class DevConfig(GlobalConfig): """Development configurations.""" - ROOT_PATH: Optional[str] = Field(None, env="DEV_ROOT_PATH") - AWS_LAMBDA_DEPLOY: Optional[bool] = Field(None, env="DEV_AWS_LAMBDA_DEPLOY") - LOG_PATH: Optional[str] = Field(None, env="DEV_LOG_PATH") - LOG_FILENAME: Optional[str] = Field(None, env="DEV_LOG_FILENAME") - LOG_LEVEL: Optional[str] = Field(None, env="DEV_LOG_LEVEL") - LOG_ENQUEUE: Optional[bool] = Field(None, env="DEV_LOG_ENQUEUE") - LOG_ROTATION: Optional[str] = Field(None, env="DEV_LOG_ROTATION") - LOG_RETENTION: Optional[str] = Field(None, env="DEV_LOG_RETENTION") - LOG_FORMAT: Optional[str] = Field(None, env="DEV_LOG_FORMAT") - OPA_ENABLED: Optional[bool] = Field(None, env="DEV_OPA_ENABLED") - OPA_URL: Optional[str] = Field(None, env="DEV_OPA_URL") - APP_URI: Optional[str] = Field(None, env="DEV_APP_URI") - OIDC_WELL_KNOWN_ENDPOINT: Optional[str] = Field( + ROOT_PATH: Optional[str] = pydantic.Field(None, env="DEV_ROOT_PATH") # type: ignore + AWS_LAMBDA_DEPLOY: Optional[bool] = pydantic.Field( + None, env="DEV_AWS_LAMBDA_DEPLOY" + ) # type: ignore + LOG_PATH: Optional[str] = pydantic.Field(None, env="DEV_LOG_PATH") # type: ignore + LOG_FILENAME: Optional[str] = pydantic.Field( + None, env="DEV_LOG_FILENAME" + ) # type: ignore + LOG_LEVEL: Optional[str] = pydantic.Field(None, env="DEV_LOG_LEVEL") # type: ignore + LOG_ENQUEUE: Optional[bool] = pydantic.Field( + None, env="DEV_LOG_ENQUEUE" + ) # type: ignore + LOG_ROTATION: Optional[str] = pydantic.Field( + None, env="DEV_LOG_ROTATION" + ) # type: ignore + LOG_RETENTION: Optional[str] = pydantic.Field( + None, env="DEV_LOG_RETENTION" + ) # type: ignore + LOG_FORMAT: Optional[str] = pydantic.Field( + None, env="DEV_LOG_FORMAT" + ) # type: ignore + OPA_ENABLED: Optional[bool] = pydantic.Field( + None, env="DEV_OPA_ENABLED" + ) # type: ignore + OPA_URL: Optional[str] = pydantic.Field(None, env="DEV_OPA_URL") # type: ignore + APP_URI: Optional[str] = pydantic.Field(None, env="DEV_APP_URI") # type: ignore + OIDC_WELL_KNOWN_ENDPOINT: Optional[str] = pydantic.Field( None, env="DEV_OIDC_WELL_KNOWN_ENDPOINT" - ) - OIDC_CLIENT_ID: Optional[str] = Field(None, env="DEV_OIDC_CLIENT_ID") - OIDC_CLIENT_SECRET: Optional[str] = Field(None, env="DEV_OIDC_CLIENT_SECRET") - API_KEY_ENABLED: Optional[bool] = Field(None, env="DEV_API_KEY_ENABLED") - PYGEOAPI_KEY_GLOBAL: Optional[str] = Field(None, env="DEV_PYGEOAPI_KEY_GLOBAL") - PYGEOAPI_BASEURL: Optional[str] = Field(None, env="DEV_PYGEOAPI_BASEURL") - PYGEOAPI_CONFIG: Optional[str] = Field(None, env="DEV_PYGEOAPI_CONFIG") - PYGEOAPI_OPENAPI: Optional[str] = Field(None, env="DEV_PYGEOAPI_OPENAPI") - FASTGEOAPI_CONTEXT: Optional[str] = Field(None, env="DEV_FASTGEOAPI_CONTEXT") + ) # type: ignore + OIDC_CLIENT_ID: Optional[str] = pydantic.Field( + None, env="DEV_OIDC_CLIENT_ID" + ) # type: ignore + OIDC_CLIENT_SECRET: Optional[str] = pydantic.Field( + None, env="DEV_OIDC_CLIENT_SECRET" + ) # type: ignore + API_KEY_ENABLED: Optional[bool] = pydantic.Field( + None, env="DEV_API_KEY_ENABLED" + ) # type: ignore + PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( + None, env="DEV_PYGEOAPI_KEY_GLOBAL" + ) # type: ignore + PYGEOAPI_BASEURL: Optional[str] = pydantic.Field( + None, env="DEV_PYGEOAPI_BASEURL" + ) # type: ignore + PYGEOAPI_CONFIG: Optional[str] = pydantic.Field( + None, env="DEV_PYGEOAPI_CONFIG" + ) # type: ignore + PYGEOAPI_OPENAPI: Optional[str] = pydantic.Field( + None, env="DEV_PYGEOAPI_OPENAPI" + ) # type: ignore + FASTGEOAPI_CONTEXT: Optional[str] = pydantic.Field( + None, env="DEV_FASTGEOAPI_CONTEXT" + ) # type: ignore + + model_config = SettingsConfigDict(env_prefix="DEV_") class ProdConfig(GlobalConfig): """Production configurations.""" - ROOT_PATH: Optional[str] = Field(None, env="PROD_ROOT_PATH") - AWS_LAMBDA_DEPLOY: Optional[bool] = Field(None, env="PROD_AWS_LAMBDA_DEPLOY") - LOG_PATH: Optional[str] = Field(None, env="PROD_LOG_PATH") - LOG_FILENAME: Optional[str] = Field(None, env="PROD_LOG_FILENAME") - LOG_LEVEL: Optional[str] = Field(None, env="PROD_LOG_LEVEL") - LOG_ENQUEUE: Optional[bool] = Field(None, env="PROD_LOG_ENQUEUE") - LOG_ROTATION: Optional[str] = Field(None, env="PROD_LOG_ROTATION") - LOG_RETENTION: Optional[str] = Field(None, env="PROD_LOG_RETENTION") - LOG_FORMAT: Optional[str] = Field(None, env="PROD_LOG_FORMAT") - OPA_ENABLED: Optional[bool] = Field(None, env="PROD_OPA_ENABLED") - OPA_URL: Optional[str] = Field(None, env="PROD_OPA_URL") - APP_URI: Optional[str] = Field(None, env="PROD_APP_URI") - OIDC_WELL_KNOWN_ENDPOINT: Optional[str] = Field( + ROOT_PATH: Optional[str] = pydantic.Field( + None, env="PROD_ROOT_PATH" + ) # type: ignore + AWS_LAMBDA_DEPLOY: Optional[bool] = pydantic.Field( + None, env="PROD_AWS_LAMBDA_DEPLOY" + ) # type: ignore + LOG_PATH: Optional[str] = pydantic.Field(None, env="PROD_LOG_PATH") # type: ignore + LOG_FILENAME: Optional[str] = pydantic.Field( + None, env="PROD_LOG_FILENAME" + ) # type: ignore + LOG_LEVEL: Optional[str] = pydantic.Field( + None, env="PROD_LOG_LEVEL" + ) # type: ignore + LOG_ENQUEUE: Optional[bool] = pydantic.Field( + None, env="PROD_LOG_ENQUEUE" + ) # type: ignore + LOG_ROTATION: Optional[str] = pydantic.Field( + None, env="PROD_LOG_ROTATION" + ) # type: ignore + LOG_RETENTION: Optional[str] = pydantic.Field( + None, env="PROD_LOG_RETENTION" + ) # type: ignore + LOG_FORMAT: Optional[str] = pydantic.Field( + None, env="PROD_LOG_FORMAT" + ) # type: ignore + OPA_ENABLED: Optional[bool] = pydantic.Field( + None, env="PROD_OPA_ENABLED" + ) # type: ignore + OPA_URL: Optional[str] = pydantic.Field(None, env="PROD_OPA_URL") # type: ignore + APP_URI: Optional[str] = pydantic.Field(None, env="PROD_APP_URI") # type: ignore + OIDC_WELL_KNOWN_ENDPOINT: Optional[str] = pydantic.Field( None, env="PROD_OIDC_WELL_KNOWN_ENDPOINT" - ) - OIDC_CLIENT_ID: Optional[str] = Field(None, env="PROD_OIDC_CLIENT_ID") - OIDC_CLIENT_SECRET: Optional[str] = Field(None, env="PROD_OIDC_CLIENT_SECRET") - API_KEY_ENABLED: Optional[bool] = Field(None, env="PROD_API_KEY_ENABLED") - PYGEOAPI_KEY_GLOBAL: Optional[str] = Field(None, env="PROD_PYGEOAPI_KEY_GLOBAL") - PYGEOAPI_BASEURL: Optional[str] = Field(None, env="PROD_PYGEOAPI_BASEURL") - PYGEOAPI_CONFIG: Optional[str] = Field(None, env="PROD_PYGEOAPI_CONFIG") - PYGEOAPI_OPENAPI: Optional[str] = Field(None, env="PROD_PYGEOAPI_OPENAPI") - FASTGEOAPI_CONTEXT: Optional[str] = Field(None, env="PROD_FASTGEOAPI_CONTEXT") + ) # type: ignore + OIDC_CLIENT_ID: Optional[str] = pydantic.Field( + None, env="PROD_OIDC_CLIENT_ID" + ) # type: ignore + OIDC_CLIENT_SECRET: Optional[str] = pydantic.Field( + None, env="PROD_OIDC_CLIENT_SECRET" + ) # type: ignore + API_KEY_ENABLED: Optional[bool] = pydantic.Field( + None, env="PROD_API_KEY_ENABLED" + ) # type: ignore + PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( + None, env="PROD_PYGEOAPI_KEY_GLOBAL" + ) # type: ignore + PYGEOAPI_BASEURL: Optional[str] = pydantic.Field( + None, env="PROD_PYGEOAPI_BASEURL" + ) # type: ignore + PYGEOAPI_CONFIG: Optional[str] = pydantic.Field( + None, env="PROD_PYGEOAPI_CONFIG" + ) # type: ignore + PYGEOAPI_OPENAPI: Optional[str] = pydantic.Field( + None, env="PROD_PYGEOAPI_OPENAPI" + ) # type: ignore + FASTGEOAPI_CONTEXT: Optional[str] = pydantic.Field( + None, env="PROD_FASTGEOAPI_CONTEXT" + ) # type: ignore + + model_config = SettingsConfigDict(env_prefix="PROD_") class FactoryConfig: @@ -84,13 +157,14 @@ def __init__(self, env_state: Optional[str]): """Initialize factory configuration.""" self.env_state = env_state + @lru_cache() def __call__(self): """Handle runtime configuration.""" if self.env_state == "dev": - return DevConfig() + return DevConfig(**GlobalConfig().model_dump()) elif self.env_state == "prod": - return ProdConfig() + return ProdConfig(**GlobalConfig().model_dump()) -configuration = FactoryConfig(GlobalConfig().ENV_STATE)() +configuration = FactoryConfig(env_state=GlobalConfig().ENV_STATE)() diff --git a/app/middleware/pygeoapi.py b/app/middleware/pygeoapi.py index 83bb91b..737764b 100644 --- a/app/middleware/pygeoapi.py +++ b/app/middleware/pygeoapi.py @@ -2,8 +2,8 @@ from typing import Any from typing import Dict -from openapi_pydantic import OpenAPI -from openapi_pydantic import SecurityScheme +from openapi_pydantic.v3.v3_0_3 import OpenAPI +from openapi_pydantic.v3.v3_0_3 import SecurityScheme from starlette.datastructures import Headers from starlette.datastructures import MutableHeaders from starlette.types import ASGIApp @@ -76,16 +76,16 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 self.headers.update(headers_dict) if message_type == "http.response.body": initial_body = message.get("body", b"").decode() - openapi = OpenAPI.parse_raw(initial_body) + openapi = OpenAPI.model_validate_json(initial_body) if self.security_scheme.type == "apiKey": security_schemes = { "securitySchemes": { - "PygeoApiKey": self.security_scheme.dict( + "PygeoApiKey": self.security_scheme.model_dump( by_alias=True, exclude_none=True ) } } - body = openapi.dict(by_alias=True, exclude_none=True) + body = openapi.model_dump(by_alias=True, exclude_none=True) components = body.get("components") if components: components.update(security_schemes) @@ -102,8 +102,8 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 if secured_paths: body["paths"] = secured_paths binary_body = ( - OpenAPI.parse_obj(body) - .json(by_alias=True, exclude_none=True, indent=2) + OpenAPI(**body) + .model_dump_json(by_alias=True, exclude_none=True, indent=2) .encode() ) headers = MutableHeaders(raw=self.initial_message["headers"]) diff --git a/cli.py b/cli.py index 7bb7daa..300b208 100644 --- a/cli.py +++ b/cli.py @@ -1,13 +1,109 @@ """Command-line interface.""" +import os +from pathlib import Path + import typer +from app.config.app import configuration as cfg +from app.utils.pygeoapi_exceptions import PygeoapiEnvError +from app.utils.pygeoapi_exceptions import PygeoapiLanguageError +from loguru import logger +from openapi_pydantic.v3.v3_0_3 import OpenAPI +from openapi_pydantic.v3.v3_0_3 import SecurityScheme +from pygeoapi.l10n import LocaleError +from pygeoapi.openapi import generate_openapi_document +from pygeoapi.provider.base import ProviderConnectionError +from rich.console import Console + + +err_console = Console(stderr=True) app = typer.Typer() -@app.command() -def main() -> None: - """fastgeoapi.""" +@app.callback() +def main_app_callback(ctx: typer.Context): + """Commandline interface for fastgeoapi.""" + + +@app.command(name="openapi") +def openapi(ctx: typer.Context) -> None: + """Generate openapi document enriched with security schemes.""" + try: + # override pygeoapi os variables + os.environ["PYGEOAPI_CONFIG"] = cfg.PYGEOAPI_CONFIG + os.environ["PYGEOAPI_OPENAPI"] = cfg.PYGEOAPI_OPENAPI + os.environ["PYGEOAPI_BASEURL"] = cfg.PYGEOAPI_BASEURL + if not (os.environ["PYGEOAPI_CONFIG"] and os.environ["PYGEOAPI_OPENAPI"]): + logger.error("pygeoapi variables are not configured") + raise PygeoapiEnvError("PYGEOAPI_CONFIG and PYGEOAPI_OPENAPI are not set") + else: + # fill pygeoapi configuration with fastapi host and port + os.environ["HOST"] = cfg.HOST + os.environ["PORT"] = cfg.PORT + pygeoapi_conf = Path.cwd() / os.environ["PYGEOAPI_CONFIG"] + pygeoapi_oapi = Path.cwd() / os.environ["PYGEOAPI_OPENAPI"] + with pygeoapi_oapi.with_suffix(".json").open(mode="w") as oapi_file: + oapi_content = generate_openapi_document( + pygeoapi_conf, + output_format="json", + ) + logger.debug(f"OpenAPI content: \n{oapi_content}") + security_scheme = None + if cfg.OPA_ENABLED: + if cfg.API_KEY_ENABLED: + raise ValueError( + "OPA_ENABLED and API_KEY_ENABLED are mutually exclusive" + ) + security_scheme = SecurityScheme( + type="openIdConnect", + name="OIDC", + openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, + ) + elif cfg.API_KEY_ENABLED: + if cfg.OPA_ENABLED: + raise ValueError( + "OPA_ENABLED and API_KEY_ENABLED are mutually exclusive" + ) + if not cfg.PYGEOAPI_KEY_GLOBAL: + raise ValueError("pygeoapi API KEY is missing") + os.environ["PYGEOAPI_KEY_GLOBAL"] = cfg.PYGEOAPI_KEY_GLOBAL + security_scheme = SecurityScheme( + type="apiKey", name="X-API-KEY", security_scheme_in="header" + ) + openapi = OpenAPI.model_validate_json(oapi_content) + if security_scheme: + dict_openapi = openapi.model_dump(by_alias=True, exclude_none=True) + components = dict_openapi.get("components") + if components: + components.update(security_scheme) + paths = openapi.paths + if paths: + secured_paths = {} + for key, value in paths.items(): + if value.get: + value.get.security = [{"PygeoApiKey": []}] + if value.post: + value.post.security = [{"PygeoApiKey": []}] + secured_paths.update({key: value}) + if secured_paths: + dict_openapi["paths"] = secured_paths + enriched_openapi = OpenAPI(**dict_openapi) + else: + enriched_openapi = openapi + oapi_file.write(enriched_openapi.model_dump_json()) -if __name__ == "__main__": - app(prog_name="fastgeoapi") # pragma: no cover + except FileNotFoundError: + logger.error("Please configure pygeoapi settings in .env properly") + raise + except OSError as e: + logger.error(f"Runtime environment variables: \n{cfg}") + raise PygeoapiEnvError from e + except LocaleError as e: + logger.error(f"Runtime language configuration: \n{oapi_content}") + raise PygeoapiLanguageError from e + except ProviderConnectionError as e: + logger.error(f"Runtime environment variables: \n{cfg}") + logger.error(f"pygeoapi configuration: \n{pygeoapi_conf}") + logger.error(e) + raise e diff --git a/mypy.ini b/mypy.ini index 976ba02..a2e213d 100644 --- a/mypy.ini +++ b/mypy.ini @@ -1,2 +1,3 @@ [mypy] +plugins = pydantic.mypy ignore_missing_imports = True diff --git a/noxfile.py b/noxfile.py index 0d19650..28a11ca 100644 --- a/noxfile.py +++ b/noxfile.py @@ -26,6 +26,7 @@ nox.options.sessions = ( "pre-commit", "safety", + "bandit", "mypy", "tests", "typeguard", @@ -124,11 +125,21 @@ def safety(session: NoxPoetrySession) -> None: # still in beta + major version change sqlalchemy 2.0.0b1 "-i", "51668", + "-i", + "61493", "--full-report", f"--file={requirements}", ) +@nox_session(python=python_versions) +def bandit(session: NoxPoetrySession) -> None: + """Scan code for vulnerabilities.""" + args = session.posargs or ["-r", "app", "-v"] + session.install("bandit") + session.run("bandit", *args) + + @nox_session(python=python_versions) def mypy(session: NoxPoetrySession) -> None: """Type-check using mypy.""" diff --git a/poetry.lock b/poetry.lock index 22d7aa8..bbfd994 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. [[package]] name = "affine" @@ -15,6 +15,17 @@ files = [ dev = ["coveralls", "flake8", "pydocstyle"] test = ["pytest (>=4.6)", "pytest-cov"] +[[package]] +name = "annotated-types" +version = "0.6.0" +description = "Reusable constraint types to use with typing.Annotated" +optional = false +python-versions = ">=3.8" +files = [ + {file = "annotated_types-0.6.0-py3-none-any.whl", hash = "sha256:0641064de18ba7a25dee8f96403ebc39113d0cb953a01429249d5c7564666a43"}, + {file = "annotated_types-0.6.0.tar.gz", hash = "sha256:563339e807e53ffd9c267e99fc6d9ea23eb8443c08f112651963e24e22f84a5d"}, +] + [[package]] name = "anyio" version = "3.7.1" @@ -37,32 +48,36 @@ test = ["anyio[trio]", "coverage[toml] (>=4.5)", "hypothesis (>=4.0)", "mock (>= trio = ["trio (<0.22)"] [[package]] -name = "appnope" -version = "0.1.3" -description = "Disable App Nap on macOS >= 10.9" +name = "argcomplete" +version = "3.1.6" +description = "Bash tab completion for argparse" optional = false -python-versions = "*" +python-versions = ">=3.8" files = [ - {file = "appnope-0.1.3-py2.py3-none-any.whl", hash = "sha256:265a455292d0bd8a72453494fa24df5a11eb18373a60c7c0430889f22548605e"}, - {file = "appnope-0.1.3.tar.gz", hash = "sha256:02bd91c4de869fbb1e1c50aafc4098827a7a54ab2f39d9dcba6c9547ed920e24"}, + {file = "argcomplete-3.1.6-py3-none-any.whl", hash = "sha256:71f4683bc9e6b0be85f2b2c1224c47680f210903e23512cfebfe5a41edfd883a"}, + {file = "argcomplete-3.1.6.tar.gz", hash = "sha256:3b1f07d133332547a53c79437527c00be48cca3807b1d4ca5cab1b26313386a6"}, ] +[package.extras] +test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] + [[package]] name = "asttokens" -version = "2.2.1" +version = "2.4.1" description = "Annotate AST trees with source code positions" optional = false python-versions = "*" files = [ - {file = "asttokens-2.2.1-py2.py3-none-any.whl", hash = "sha256:6b0ac9e93fb0335014d382b8fa9b3afa7df546984258005da0b9e7095b3deb1c"}, - {file = "asttokens-2.2.1.tar.gz", hash = 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d83b215..9dd00bc 100644 --- a/pygeoapi-config.yml +++ b/pygeoapi-config.yml @@ -31,7 +31,7 @@ server: bind: host: 0.0.0.0 port: 5000 - url: http://localhost:5000/api + url: http://localhost:5000/geoapi mimetype: application/json; charset=UTF-8 encoding: utf-8 gzip: false diff --git a/pygeoapi-openapi.yml b/pygeoapi-openapi.yml index c85f3c6..5577241 100644 --- a/pygeoapi-openapi.yml +++ b/pygeoapi-openapi.yml @@ -1,6 +1,33 @@ components: parameters: + bbox: + description: + Only features that have a geometry that intersects the bounding + box are selected.The bounding box is provided as four or six numbers, depending + on whether the coordinate reference system includes a vertical axis (height + or depth). + explode: false + in: query + name: bbox + required: false + schema: + items: + type: number + maxItems: 6 + minItems: 4 + type: array + style: form bbox-crs: + description: Indicates the coordinate reference system for the given bbox coordinates. + explode: false + in: query + name: bbox-crs + required: false + schema: + format: uri + type: string + style: form + bbox-crs-epsg: description: Indicates the EPSG for the given bbox coordinates. explode: false in: query @@ -10,6 +37,16 @@ components: default: 4326 type: integer style: form + crs: + description: Indicates the coordinate reference system for the results. + explode: false + in: query + name: crs + required: false + schema: + format: uri + type: string + style: form f: description: The optional f parameter indicates the output format which the @@ -94,6 +131,8 @@ components: responses: "200": description: successful operation + "204": + description: no content Queryables: content: application/json: @@ -154,7 +193,7 @@ info: url: https://creativecommons.org/licenses/by/4.0/ termsOfService: https://creativecommons.org/licenses/by/4.0/ title: pygeoapi default instance - version: 0.15.dev0 + version: 0.16.dev0 x-keywords: - geospatial - data @@ -256,8 +295,10 @@ paths: - en-US - fr-CA type: string - - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/bbox + - $ref: "#/components/parameters/bbox" - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/limit + - $ref: "#/components/parameters/crs" + - $ref: "#/components/parameters/bbox-crs" - description: The properties that should be included for each feature. The parameter value is a comma-separated list of property names. @@ -335,12 +376,21 @@ paths: summary: Get Large Lakes items tags: - lakes + options: + operationId: optionsLakesFeatures + responses: + "200": + description: options response + summary: Options for Large Lakes items + tags: + - lakes /collections/lakes/items/{featureId}: get: description: lakes of the world, public domain operationId: getLakesFeature parameters: - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/featureId + - $ref: "#/components/parameters/crs" - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: @@ -355,6 +405,16 @@ paths: summary: Get Large Lakes item by id tags: - lakes + options: + operationId: optionsLakesFeature + parameters: + - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/featureId + responses: + "200": + description: options response + summary: Options for Large Lakes item by id + tags: + - lakes /collections/lakes/queryables: get: description: lakes of the world, public domain @@ -400,8 +460,10 @@ paths: parameters: - *id001 - *id002 - - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/bbox + - $ref: "#/components/parameters/bbox" - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/limit + - $ref: "#/components/parameters/crs" + - $ref: "#/components/parameters/bbox-crs" - description: The properties that should be included for each feature. The parameter value is a comma-separated list of property names. @@ -463,12 +525,21 @@ paths: summary: Get Observations items tags: - obs + options: + operationId: optionsObsFeatures + responses: + "200": + description: options response + summary: Options for Observations items + tags: + - obs /collections/obs/items/{featureId}: get: description: My cool observations operationId: getObsFeature parameters: - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/featureId + - $ref: "#/components/parameters/crs" - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: @@ -483,6 +554,16 @@ paths: summary: Get Observations item by id tags: - obs + options: + operationId: optionsObsFeature + parameters: + - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/featureId + responses: + "200": + description: options response + summary: Options for Observations item by id + tags: + - obs /collections/obs/queryables: get: description: My cool observations @@ -519,6 +600,75 @@ paths: summary: API conformance definition tags: - server + /jobs: + get: + description: Retrieve a list of jobs + operationId: getJobs + responses: + "200": + $ref: "#/components/responses/200" + "404": + $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml + default: + $ref: "#/components/responses/default" + summary: Retrieve jobs list + tags: + - jobs + /jobs/{jobId}: + delete: + description: Cancel / delete job + operationId: deleteJob + parameters: + - &id003 + description: job identifier + in: path + name: jobId + required: true + schema: + type: string + responses: + "204": + $ref: "#/components/responses/204" + "404": + $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml + default: + $ref: "#/components/responses/default" + summary: Cancel / delete job + tags: + - jobs + get: + description: Retrieve job details + operationId: getJob + parameters: + - *id003 + - $ref: "#/components/parameters/f" + responses: + "200": + $ref: "#/components/responses/200" + "404": + $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml + default: + $ref: "#/components/responses/default" + summary: Retrieve job details + tags: + - jobs + /jobs/{jobId}/results: + get: + description: Retrive job resiults + operationId: getJobResults + parameters: + - *id003 + - $ref: "#/components/parameters/f" + responses: + "200": + $ref: "#/components/responses/200" + "404": + $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml + default: + $ref: "#/components/responses/default" + summary: Retrieve job results + tags: + - jobs /openapi: get: description: This document @@ -613,13 +763,15 @@ paths: - hello-world servers: - description: pygeoapi provides an API to geospatial data - url: http://localhost:5000/api + url: http://localhost:5000/geoapi tags: - description: pygeoapi provides an API to geospatial data externalDocs: description: information url: https://example.org name: server + - description: Process jobs + name: jobs - description: SpatioTemporal Asset Catalog name: stac - description: My cool observations diff --git a/pyproject.toml b/pyproject.toml index 5c8a9ff..4e0dd40 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "fastgeoapi" -version = "0.0.0" +version = "0.0.1" description = "fastgeoapi" authors = ["Francesco Bartoli "] license = "MIT" @@ -12,7 +12,7 @@ classifiers = [ "Development Status :: 1 - Planning", ] packages = [ - { include = "cli.py" }, + {include = "cli.py", from= "."}, { include = "app" }, { include = "app/**/*.py" }, ] @@ -23,31 +23,33 @@ Changelog = "https://github.com/geobeyond/fastgeoapi/releases" [tool.poetry.dependencies] python = ">=3.9,<4.0" mangum = "^0.14.1" -loguru = "^0.6.0" +loguru = "^0.7.2" jinja2 = "3.0.3" -fastapi-opa = "^1.4.4" -rasterio = "1.3.7" # fix https://github.com/rasterio/rasterio/issues/2333 +fastapi-opa = "^1.4.7" +rasterio = "1.3.9" # fix https://github.com/rasterio/rasterio/issues/2333 pygeoapi = {git = "https://github.com/geopython/pygeoapi", rev = "master"} -uvicorn = {extras = ["standard"], version = "^0.20.0"} -fastapi = "^0.101" -typer = {extras = ["all"], version = "^0.7.0"} -pydantic = {extras = ["dotenv", "email"], version = "^1.10.9"} +uvicorn = {extras = ["standard"], version = "^0.25.0"} +fastapi = {extras = ["all"], version = "^0.106"} +typer = {extras = ["all"], version = "^0.9.0"} nest-asyncio = "^1.5.6" fastapi-key-auth = "^0.12.0" -sqlalchemy = "^1.4.48" +sqlalchemy = "^1.4.50" geoalchemy2 = "^0.12.5" shapely = "<2.0" -psycopg2 = "^2.9.6" -openapi-pydantic = "^0.3.1" +psycopg2 = "^2.9.7" +openapi-pydantic = "^0.3.2" +pygeofilter = {extras = ["backend-sqlalchemy"], version = "^0.2.1"} +pydantic-settings = "^2.1.0" [tool.poetry.scripts] -fastgeoapi = "fastgeoapi.cli:main" +fastgeoapi = "cli:app" [tool.poetry.group.dev.dependencies] pytest = "^7.4.0" coverage = {extras = ["toml"], version = "^6.5.0"} typeguard = "^2.13.3" xdoctest = {extras = ["colors"], version = "^0.15.10"} +# datamodel-code-generator = {extras = ["http"], version = "^0.22.1"} pre-commit = "^2.21.0" black = "^22.12.0" flake8-bandit = "^4.1.1" @@ -66,7 +68,11 @@ mkdocs-material-extensions = "^1.1.1" bandit = "^1.7.5" ipython = "^8.12.2" safety = "<2.0" -mypy = "^0.991" +mypy = "^1.5.0" +commitizen = "^3.6.0" +pdbpp = {git = "https://github.com/pdbpp/pdbpp", rev = "master"} +fencer = "^0.3.6" +# jsonref = "^1.1.0" [tool.coverage.paths] source = [".", "*/site-packages"] @@ -81,6 +87,7 @@ show_missing = true fail_under = 100 [tool.mypy] +exclude = ".venv" strict = true warn_unreachable = true pretty = true @@ -88,6 +95,14 @@ show_column_numbers = true show_error_codes = true show_error_context = true +[tool.commitizen] +name = "cz_conventional_commits" +tag_format = "$version" +version_scheme = "semver" +version_provider = "poetry" +update_changelog_on_bump = true +major_version_zero = true + [build-system] requires = ["poetry-core>=1.0.0"] build-backend = "poetry.core.masonry.api" diff --git a/tests/test_cli.py b/tests/test_cli.py index 97ea8b2..579a934 100644 --- a/tests/test_cli.py +++ b/tests/test_cli.py @@ -10,7 +10,7 @@ def runner() -> CliRunner: return CliRunner() -def test_main_succeeds(runner: CliRunner) -> None: +def test_openapi_succeeds(runner: CliRunner) -> None: """It exits with a status code of zero.""" - result = runner.invoke(app) + result = runner.invoke(app, ["openapi"]) assert result.exit_code == 0