From a8fad47952a38e1f113f50eb60d4a1918b5ef971 Mon Sep 17 00:00:00 2001 From: schochastics Date: Wed, 15 Feb 2023 14:58:48 +0100 Subject: [PATCH] adding readme to the output folder (#50) --- R/installation.R | 15 ++++++++++++ inst/readme_template.txt | 53 ++++++++++++++++++++++++++++++++++++++++ 2 files changed, 68 insertions(+) create mode 100644 inst/readme_template.txt diff --git a/R/installation.R b/R/installation.R index fde0993..1a981ad 100644 --- a/R/installation.R +++ b/R/installation.R @@ -249,6 +249,18 @@ return(dockerfile_content) } +.generate_docker_readme <- function(output_dir,image){ + file.create(file.path(output_dir,"README")) + con <- file(file.path(output_dir,"README"), open="w") + readme <- readLines(system.file("readme_template.txt", package = "rang")) + readme <- gsub("__DATE__",Sys.Date(),readme) + readme <- gsub("__OUTPUT__",output_dir,readme) + readme <- gsub("__IMAGE__",image,readme) + writeLines(readme,file.path(output_dir,"README")) + close(con) + invisible(readme) +} + #' Export The Resolved Result As Installation Script #' #' This function exports the results from [resolve()] to an installation script that can be run in a fresh R environment. @@ -404,6 +416,9 @@ dockerize <- function(rang, output_dir, materials_dir = NULL, image = c("r-ver", dockerfile_content <- .insert_materials_dir(dockerfile_content) } writeLines(dockerfile_content, file.path(output_dir, "Dockerfile")) + + .generate_docker_readme(output_dir = output_dir,image = image) + invisible(output_dir) } diff --git a/inst/readme_template.txt b/inst/readme_template.txt new file mode 100644 index 0000000..ea3bbfa --- /dev/null +++ b/inst/readme_template.txt @@ -0,0 +1,53 @@ +This README offers some guidance on how to work with the included docker container +which was created with the R package rang on __DATE__ + +# Installing docker + +The installation depends on the OS you are running +Follow the steps outlined in the official docs: https://docs.docker.com/engine/install/ +For Windows, you can also check out https://learn.microsoft.com/en-us/virtualization/windowscontainers/quick-start/set-up-environment + +# Run the docker container +Open a command prompt window (In Windows this could be the built-in command prompt, PowerShell, or Windows Terminal) +navigate to output_dir in the command prompt: `cd __OUTPUT__` + +Note that all docker commands below might need sudo rights on Linux distros +If you want to run docker without sudo, follow the steps outlined here: https://docs.docker.com/engine/install/linux-postinstall/#manage-docker-as-a-non-root-user + +The execution depends on what image you chose when dockerizing (image used here: __IMAGE__) + +## image!="rstudio" +docker build -t rang . +docker run --rm --name "rangtest" -ti rang + +You can change the --name paramater to something more suitable for your container +An R command prompt should open. To confirm that you have succesfully gone back in time, +use the `sessionInfo()` command + +## image = "rstudio" +docker build -t rang . +docker run -p 8787:8787 -e PASSWORD=abc123 --rm --name "rangtest" -ti rang + +You can change the --name paramater to something more suitable for your container +when the building is finished, open a browser and go to localhost:8787 +The default username is rstudio, password as specified above (in this case abc123). +To confirm that you have succesfully gone back in time, +use the `sessionInfo()` command + +## Need more information about rang? +Check the vignette included in the package + +## Need more information about docker? + +- Consult the docker documentation: https://docs.docker.com/get-started/ +- Consult this docker tutorial: https://docker-curriculum.com/ +- Using Windows? Checkout Microsofts documentation: https://learn.microsoft.com/en-us/virtualization/windowscontainers/ + +## Issues? + +If you are unable to run this docker container please file an issue at https://github.com/chainsawriot/rang/issues +containing the following information: + +- The `resolve()` command you executed in R +- The `dockerize()` command you executed in R +- The error message shown in your command prompt