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spm_DEM_qP.m
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spm_DEM_qP.m
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function spm_DEM_qP(qP,pP)
% Report on conditional estimates of parameters
% FORMAT spm_DEM_qP(qP,pP)
%
% qP.P - conditional expectations
% qP.V - conditional variance
%
% pP - optional priors
%__________________________________________________________________________
% Karl Friston
% Copyright (C) 2005-2022 Wellcome Centre for Human Neuroimaging
% unpack conditional covariances
%--------------------------------------------------------------------------
g = length(qP.P); % depth of hierarchy
ci = spm_invNcdf(1 - 0.05);
% loop over levels
%--------------------------------------------------------------------------
Label = {};
col = [1 3/4 3/4];
for i = 1:g
% check for last level
%----------------------------------------------------------------------
if isempty(qP.P{i}), break, end
% get labels
%----------------------------------------------------------------------
label = {};
if isstruct(qP.P{i})
names = fieldnames(qP.P{i});
for j = 1:length(names)
for k = 1:length(spm_vec(getfield(qP.P{i},names{j})))
label{end + 1} = names{j};
end
end
end
% conditional expectations (with priors if specified)
%----------------------------------------------------------------------
qi = spm_vec(qP.P{i});
c = sqrt(spm_vec(qP.V{i}))*ci;
j = find(c);
qi = qi(j);
c = c(j);
try
label = label(j);
end
try
pi = spm_vec(pP.P{i});
pi = pi(j);
end
np = length(qi);
if np
% use current axes if P = P{1}
%------------------------------------------------------------------
if g > 1, subplot(g,1,i), end
% conditional means
%------------------------------------------------------------------
bar(qi,'Edgecolor',[1 1 1]/2,'Facecolor',[1 1 1]*.8)
title(sprintf('parameters - level %i',i),'FontSize',16);
axis square
box off
set(gca,'XLim',[0 np + 1])
% conditional variances
%------------------------------------------------------------------
for k = 1:np
line([k k], [-1 1]*c(k) + qi(k),'LineWidth',4,'Color',col);
end
% prior or true means
%------------------------------------------------------------------
try
hold on, bar(1:length(qi),pi,1/3), hold off
end
% labels
%------------------------------------------------------------------
for k = 1:length(label)
text(k + 1/4,qi(k),label{k},'FontWeight','Bold','Color','r');
end
Label = [Label, label];
end
end
% conditional (or prior) covariance
%--------------------------------------------------------------------------
try
if length(qP.C) == 1;
return
else
i = find(diag(qP.C));
end
catch
return
end
subplot(g,2,g + g - 1)
if exist('pC','var')
imagesc(spm_cov2corr(pC(i,i)))
title({'prior correlations','among parameters'},'FontSize',16)
else
imagesc(qP.C(i,i))
title({'conditional covariances','among parameters'},'FontSize',16)
end
if ~isempty(Label)
set(gca,'YTickLabel',Label,'YTick',[1:length(Label)])
end
axis square
% plot evolution of hyperparameters if supplied
%==========================================================================
subplot(g,2,g + g)
try
% confidence interval and expectations
%----------------------------------------------------------------------
ns = length(qP.p);
t = 1:ns;
for i = 1:ns
v(:,i) = sqrt(diag(qP.U*qP.c{i}*qP.U'));
end
c = ci*v;
p = qP.U*spm_cat(qP.p);
i = find(any(v,2));
c = c(i,:);
p = p(i,:);
% plot
%----------------------------------------------------------------------
hold on
np = size(p,1);
for i = 1:np
fill([t fliplr(t)],[(p(i,:) + c(i,:)) fliplr(p(i,:) - c(i,:))],...
[1 1 1]*.8,'EdgeColor',[1 1 1]/2)
plot(t,p(i,:))
end
set(gca,'XLim',[1 ns])
title({'dynamics of parameters','(minus prior)'},'FontSize',16)
xlabel('time')
axis square
hold off
catch
% or correlations
%----------------------------------------------------------------------
imagesc(spm_cov2corr(qP.C(i,i)))
title({'conditional correlations','among parameters'},'FontSize',16)
axis square
drawnow
end