diff --git a/modules/navigation/navigation_mesh_generator.cpp b/modules/navigation/navigation_mesh_generator.cpp
index cfb8e0cd42f3..f989fc45a5fb 100644
--- a/modules/navigation/navigation_mesh_generator.cpp
+++ b/modules/navigation/navigation_mesh_generator.cpp
@@ -209,6 +209,9 @@ void NavigationMeshGenerator::_parse_geometry(const Transform3D &p_navmesh_trans
 			for (uint32_t shape_owner : shape_owners) {
 				const int shape_count = static_body->shape_owner_get_shape_count(shape_owner);
 				for (int i = 0; i < shape_count; i++) {
+					if (static_body->is_shape_owner_disabled(i)) {
+						continue;
+					}
 					Ref<Shape3D> s = static_body->shape_owner_get_shape(shape_owner, i);
 					if (s.is_null()) {
 						continue;