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Sometimes, the start point and end points of arcs (positions) are not well exported in SBGN-ML.
Attached is an example SBGN-ML file created using newt (start_end_point.txt).
Rendering it using exact sizes and positions as given in the SBGN-ML file would render the map of the attached pdf (start_end_point.pdf).
We can see that all start points and the end point of the consumption are slightly incorrect, whereas the end point of the production and the stimulation are more largely.
Sometimes, the start point and end points of arcs (positions) are not well exported in SBGN-ML.
Attached is an example SBGN-ML file created using newt (start_end_point.txt).
Rendering it using exact sizes and positions as given in the SBGN-ML file would render the map of the attached pdf (start_end_point.pdf).
We can see that all start points and the end point of the consumption are slightly incorrect, whereas the end point of the production and the stimulation are more largely.
SBGN-ML file: start_end_point.txt
PDF rendered with exact positions and sizes: start_end_point.pdf
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