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mmcif_ihm_flr-core.dic
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mmcif_ihm_flr-core.dic
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data_mmcif_ihm_flr-core.dic
_pdbx_dictionary_component.datablock_id mmcif_ihm_flr-core.dic
_pdbx_dictionary_component.dictionary_component_id mmcif_ihm_flr-core.dic
_pdbx_dictionary_component.title "flrCIF dictionary: mmcif_ihm_flr-core"
_pdbx_dictionary_component.version 0.01
loop_
_pdbx_dictionary_component_history.dictionary_component_id
_pdbx_dictionary_component_history.version
_pdbx_dictionary_component_history.update
_pdbx_dictionary_component_history.revision
mmcif_ihm_flr-core.dic 0.000 2018-05-25
;
Changes (bv/cah/tp/md/cams/jdw)
+ Release as initial version 0.000
;
mmcif_ihm_flr-core.dic 0.001 2019-03-08
;
Changes (bv)
+ Updated flags to be case insensitive
;
mmcif_ihm_flr-core.dic 0.002 2019-04-05
;
Changes (bv)
+ Changed _flr_FPS_global_parameter.forster_radius_id to _flr_FPS_global_parameter.forster_radius_value
;
mmcif_ihm_flr-core.dic 0.003 2019-05-22
;
Changes (bv)
+ Deleted FLR_CHEMICAL_DESCRIPTOR and modified all children to point to IHM_CHEMICAL_COMPONENT_DESCRIPTOR
;
mmcif_ihm_flr-core.dic 0.004 2019-10-07
;
Changes (bv)
+ Added FLR_INST_SETTING
+ Changed FLR_EXP_SETTING to FLR_EXP_CONDITION
;
mmcif_ihm_flr-core.dic 0.005 2019-10-15
;
Changes (bv)
+ Added categories to describe lifetime-based analysis
;
mmcif_ihm_flr-core.dic 0.006 2019-12-18
;
Changes (bv)
+ Updated the parent of _flr_fret_model_quality.dataset_group_id to match with changes in the IHM dictionary.
;
mmcif_ihm_flr-core.dic 0.007 2020-08-10
;
Changes (bv)
+ Added _flr_poly_probe_position.asym_id
;
mmcif_ihm_flr-core.dic 0.008 2022-09-28
;
Changes (bv)
+ Added flr_kinetic_scheme, flr_kinetic_scheme_state, flr_kinetic_scheme_connectivity
+ Added flr_kinetic_rate, flr_kinetic_rate_scheme_connectivity
+ Added flr_relaxation_time, flr_relaxation_time_kinetic_scheme
;
mmcif_ihm_flr-core.dic 0.009 2022-12-20
;
Changes (bv)
+ Renamed dictionary to flrCIF and updated README.md
+ Added flr_kinetic_rate_analysis and flr_relaxation_time_analysis
+ Updated and moved flr_kinetic_scheme, flr_kinetic_scheme_connectivity, flr_kinetic_rate, flr_relaxation_time,
and flr_relaxation_time_kinetic_scheme to IHMCIF dictionary
+ Removed flr_kinetic_scheme_state
;
mmcif_ihm_flr-core.dic 0.01 2023-12-22
;
Changes (bv)
+ Reorganize dictionary files
;
####################
## FLR_INSTRUMENT ##
####################
save_flr_instrument
_category.description
; Data items in the FLR_INSTRUMENT category records the
details of the instrument.
;
_category.id flr_instrument
_category.mandatory_code no
loop_
_category_key.name '_flr_instrument.id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_instrument
save_
save__flr_instrument.id
_item_description.description
; A unique identifier for the instrument.
;
_item.name '_flr_instrument.id'
_item.category_id flr_instrument
_item.mandatory_code yes
_item_type.code int
save_
save__flr_instrument.details
_item_description.description
; Details about the instrument.
;
_item.name '_flr_instrument.details'
_item.category_id flr_instrument
_item.mandatory_code no
_item_type.code text
save_
######################
## FLR_INST_SETTING ##
######################
save_flr_inst_setting
_category.description
; Data items in the FLR_INST_SETTING category records the
details of the instrumental settings used in the experiment.
;
_category.id flr_inst_setting
_category.mandatory_code no
loop_
_category_key.name '_flr_inst_setting.id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_inst_setting
save_
save__flr_inst_setting.id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_inst_setting.id'
_item.category_id flr_inst_setting
_item.mandatory_code yes
_item_type.code int
save_
save__flr_inst_setting.details
_item_description.description
; Details about the instrumental settings used in the experiment.
;
_item.name '_flr_inst_setting.details'
_item.category_id flr_inst_setting
_item.mandatory_code no
_item_type.code text
save_
#######################
## FLR_EXP_CONDITION ##
#######################
save_flr_exp_condition
_category.description
; Data items in the FLR_EXP_CONDITION category records the
details of the experimental conditions including the
temperature at which the experiment is carried out.
;
_category.id flr_exp_condition
_category.mandatory_code no
loop_
_category_key.name '_flr_exp_condition.id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_exp_condition
save_
save__flr_exp_condition.id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_exp_condition.id'
_item.category_id flr_exp_condition
_item.mandatory_code yes
_item_type.code int
save_
save__flr_exp_condition.details
_item_description.description
; Details about the experimental conditions.
;
_item.name '_flr_exp_condition.details'
_item.category_id flr_exp_condition
_item.mandatory_code no
_item_type.code text
save_
####################
## FLR_EXPERIMENT ##
####################
save_flr_experiment
_category.description
; Data items in the FLR_EXPERIMENT category records the
details of the fluorescence experiment.
;
_category.id flr_experiment
_category.mandatory_code no
loop_
_category_key.name '_flr_experiment.ordinal_id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_experiment
save_
save__flr_experiment.ordinal_id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_experiment.ordinal_id'
_item.category_id flr_experiment
_item.mandatory_code yes
_item_type.code int
save_
save__flr_experiment.id
_item_description.description
; A unique identifier for the experiment.
;
_item.name '_flr_experiment.id'
_item.category_id flr_experiment
_item.mandatory_code yes
_item_type.code int
save_
save__flr_experiment.instrument_id
_item_description.description
; An identifier for the instrument used in the experiment.
;
_item.name '_flr_experiment.instrument_id'
_item.category_id flr_experiment
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_experiment.instrument_id'
_item_linked.parent_name '_flr_instrument.id'
save_
save__flr_experiment.inst_setting_id
_item_description.description
; An identifier for the instrument setting used in the experiment.
;
_item.name '_flr_experiment.inst_setting_id'
_item.category_id flr_experiment
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_experiment.inst_setting_id'
_item_linked.parent_name '_flr_inst_setting.id'
save_
save__flr_experiment.exp_condition_id
_item_description.description
; An identifier for the experimental conditions.
;
_item.name '_flr_experiment.exp_condition_id'
_item.category_id flr_experiment
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_experiment.exp_condition_id'
_item_linked.parent_name '_flr_exp_condition.id'
save_
save__flr_experiment.sample_id
_item_description.description
; An identifier for the sample with all the probes attached.
;
_item.name '_flr_experiment.sample_id'
_item.category_id flr_experiment
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_experiment.sample_id'
_item_linked.parent_name '_flr_sample_probe_details.sample_id'
save_
save__flr_experiment.details
_item_description.description
; Additional details about the experiment.
;
_item.name '_flr_experiment.details'
_item.category_id flr_experiment
_item.mandatory_code no
_item_type.code text
save_
#########################
## FLR_ENTITY_ASSEMBLY ##
#########################
save_flr_entity_assembly
_category.description
; Data items in the FLR_ENTITY_ASSEMBLY category records the
details of the components in the entity assembly.
;
_category.id flr_entity_assembly
_category.mandatory_code no
loop_
_category_key.name '_flr_entity_assembly.ordinal_id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_entity_assembly
save_
save__flr_entity_assembly.ordinal_id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_entity_assembly.ordinal_id'
_item.category_id flr_entity_assembly
_item.mandatory_code yes
_item_type.code int
save_
save__flr_entity_assembly.assembly_id
_item_description.description
; An identifier for the entity assembly.
;
_item.name '_flr_entity_assembly.assembly_id'
_item.category_id flr_entity_assembly
_item.mandatory_code yes
_item_type.code int
save_
save__flr_entity_assembly.entity_id
_item_description.description
; An identifier for the entity.
;
_item.name '_flr_entity_assembly.entity_id'
_item.category_id flr_entity_assembly
_item.mandatory_code yes
_item_type.code code
_item_linked.child_name '_flr_entity_assembly.entity_id'
_item_linked.parent_name '_entity.id'
save_
save__flr_entity_assembly.num_copies
_item_description.description
; The number of copies/instances of the entity in the assembly.
;
_item.name '_flr_entity_assembly.num_copies'
_item.category_id flr_entity_assembly
_item.mandatory_code yes
_item_type.code int
save_
save__flr_entity_assembly.entity_description
_item_description.description
; The description of the entity.
;
_item.name '_flr_entity_assembly.entity_description'
_item.category_id flr_entity_assembly
_item.mandatory_code no
_item_type.code line
_item_linked.child_name '_flr_entity_assembly.entity_description'
_item_linked.parent_name '_entity.pdbx_description'
save_
##########################
## FLR_SAMPLE_CONDITION ##
##########################
save_flr_sample_condition
_category.description
; Data items in the FLR_SAMPLE_CONDITION category records the
details of the sample conditions including description of the
buffer.
;
_category.id flr_sample_condition
_category.mandatory_code no
loop_
_category_key.name '_flr_sample_condition.id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_sample_condition
save_
save__flr_sample_condition.id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_sample_condition.id'
_item.category_id flr_sample_condition
_item.mandatory_code yes
_item_type.code int
save_
save__flr_sample_condition.details
_item_description.description
; Details about the sample conditions.
;
_item.name '_flr_sample_condition.details'
_item.category_id flr_sample_condition
_item.mandatory_code no
_item_type.code text
save_
############
# FLR_SAMPLE
############
save_flr_sample
_category.description
; Data items in the FLR_SAMPLE category records the
details of the sample in the Fluorescence experiment.
;
_category.id flr_sample
_category.mandatory_code no
loop_
_category_key.name '_flr_sample.id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
#...abbreviated...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_sample
save_
save__flr_sample.id
_item_description.description
; An identifier for the experimental sample.
;
_item.name '_flr_sample.id'
_item.category_id flr_sample
_item.mandatory_code yes
_item_type.code int
save_
save__flr_sample.sample_description
_item_description.description
; An author provided description for the sample.
;
_item.name '_flr_sample.sample_description'
_item.category_id flr_sample
_item.mandatory_code no
_item_type.code line
save_
save__flr_sample.sample_details
_item_description.description
; Additional details about the sample.
;
_item.name '_flr_sample.sample_details'
_item.category_id flr_sample
_item.mandatory_code no
_item_type.code text
save_
save__flr_sample.num_of_probes
_item_description.description
; Number of probes in the sample.
;
_item.name '_flr_sample.num_of_probes'
_item.category_id flr_sample
_item.mandatory_code yes
_item_type.code int
save_
save__flr_sample.solvent_phase
_item_description.description
; The phase of the solvent.
;
_item.name '_flr_sample.solvent_phase'
_item.category_id flr_sample
_item.mandatory_code yes
_item_type.code code
loop_
_item_enumeration.value
_item_enumeration.detail
'liquid' 'Freely diffusing molecules in solution'
'vitrified' 'Molecules in vitrified solution'
'other' 'Other'
save_
save__flr_sample.sample_condition_id
_item_description.description
; The id corresponding to the sample condition.
;
_item.name '_flr_sample.sample_condition_id'
_item.category_id flr_sample
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_sample.sample_condition_id'
_item_linked.parent_name '_flr_sample_condition.id'
save_
save__flr_sample.entity_assembly_id
_item_description.description
; This data item is a pointer to _flr_entity_assembly.assembly_id
in the FLR_ENTITY_ASSEMBLY category.
;
_item.name '_flr_sample.entity_assembly_id'
_item.category_id flr_sample
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_sample.entity_assembly_id'
_item_linked.parent_name '_flr_entity_assembly.assembly_id'
save_
####################
## FLR_PROBE_LIST ##
####################
save_flr_probe_list
_category.description
; Data items in the FLR_PROBE_LIST category records the
list of the fluorescent probes used as probes in the experiment.
;
_category.id flr_probe_list
_category.mandatory_code no
loop_
_category_key.name '_flr_probe_list.probe_id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_probe_list
save_
save__flr_probe_list.probe_id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_probe_list.probe_id'
_item.category_id flr_probe_list
_item.mandatory_code yes
_item_type.code int
save_
save__flr_probe_list.chromophore_name
_item_description.description
; Author provided name for the chromophore.
;
_item.name '_flr_probe_list.chromophore_name'
_item.category_id flr_probe_list
_item.mandatory_code no
_item_type.code line
save_
save__flr_probe_list.reactive_probe_flag
_item_description.description
; Indicate whether the probe has a reactive form.
;
_item.name '_flr_probe_list.reactive_probe_flag'
_item.category_id flr_probe_list
_item.mandatory_code yes
_item_type.code ucode
loop_
_item_enumeration.value
"yes"
"no"
save_
save__flr_probe_list.reactive_probe_name
_item_description.description
; Author provided name for the reactive_probe, if applicable.
;
_item.name '_flr_probe_list.reactive_probe_name'
_item.category_id flr_probe_list
_item.mandatory_code no
_item_type.code line
save_
save__flr_probe_list.probe_origin
_item_description.description
; The origin of the probe.
;
_item.name '_flr_probe_list.probe_origin'
_item.category_id flr_probe_list
_item.mandatory_code yes
_item_type.code code
loop_
_item_enumeration.value
_item_enumeration.detail
'intrinsic' 'a probe which is an instrinsic part of the biomolecule; eg: Tryptophan or Flavins or metals in EPR'
'extrinsic' 'a probe that has been synthetically introduced for carrying out the experiment; eg: organic probe Alexa 488 or MANT-ATP'
save_
save__flr_probe_list.probe_link_type
_item_description.description
; The type of link between the probe and the biomolecule.
;
_item.name '_flr_probe_list.probe_link_type'
_item.category_id flr_probe_list
_item.mandatory_code yes
_item_type.code code
loop_
_item_enumeration.value
_item_enumeration.detail
'covalent' 'a probe which is covalently linked to the biomolecule; eg: Tryptophan in proteins or Alexa 488'
'ligand' 'a probe that is not covalently linked to the biomolecule; eg: Flavins, MANT-ATP'
save_
##############################
## FLR_SAMPLE_PROBE_DETAILS ##
##############################
save_flr_sample_probe_details
_category.description
; Data items in the FLR_SAMPLE_PROBE_DETAILS category records the
details of the various fluorescent probes present in the different
samples in the experiment.
;
_category.id flr_sample_probe_details
_category.mandatory_code no
loop_
_category_key.name '_flr_sample_probe_details.sample_probe_id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_sample_probe_details
save_
save__flr_sample_probe_details.sample_probe_id
_item_description.description
; A unique identifier for the probe in the sample.
;
_item.name '_flr_sample_probe_details.sample_probe_id'
_item.category_id flr_sample_probe_details
_item.mandatory_code yes
_item_type.code int
save_
save__flr_sample_probe_details.sample_id
_item_description.description
; An identifier for the sample.
;
_item.name '_flr_sample_probe_details.sample_id'
_item.category_id flr_sample_probe_details
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_sample_probe_details.sample_id'
_item_linked.parent_name '_flr_sample.id'
save_
save__flr_sample_probe_details.probe_id
_item_description.description
; An identifier for the probe.
;
_item.name '_flr_sample_probe_details.probe_id'
_item.category_id flr_sample_probe_details
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_sample_probe_details.probe_id'
_item_linked.parent_name '_flr_probe_list.probe_id'
save_
save__flr_sample_probe_details.poly_probe_position_id
_item_description.description
; An identifier for the position in the polymeric entity where the probe
is attached.
;
_item.name '_flr_sample_probe_details.poly_probe_position_id'
_item.category_id flr_sample_probe_details
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_sample_probe_details.poly_probe_position_id'
_item_linked.parent_name '_flr_poly_probe_position.id'
save_
save__flr_sample_probe_details.fluorophore_type
_item_description.description
; The type of fluorophore.
;
_item.name '_flr_sample_probe_details.fluorophore_type'
_item.category_id flr_sample_probe_details
_item.mandatory_code yes
_item_type.code code
loop_
_item_enumeration.value
'donor'
'acceptor'
'unspecified'
save_
save__flr_sample_probe_details.description
_item_description.description
; Author provided description for the probe in the sample.
;
_item.name '_flr_sample_probe_details.description'
_item.category_id flr_sample_probe_details
_item.mandatory_code no
_item_type.code text
save_
##########################
## FLR_PROBE_DESCRIPTOR ##
##########################
save_flr_probe_descriptor
_category.description
; Data items in the FLR_PROBE_DESCRIPTOR category records the
details of the chemical descriptors of the fluorescent probes
used in the experiment.
;
_category.id flr_probe_descriptor
_category.mandatory_code no
loop_
_category_key.name '_flr_probe_descriptor.probe_id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_probe_descriptor
save_
save__flr_probe_descriptor.probe_id
_item_description.description
; An identifier for the probe, whose reactive form is described.
;
_item.name '_flr_probe_descriptor.probe_id'
_item.category_id flr_probe_descriptor
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_probe_descriptor.probe_id'
_item_linked.parent_name '_flr_probe_list.probe_id'
save_
save__flr_probe_descriptor.reactive_probe_chem_descriptor_id
_item_description.description
; The identifier for the chemical descriptor of the reactive probe.
;
_item.name '_flr_probe_descriptor.reactive_probe_chem_descriptor_id'
_item.category_id flr_probe_descriptor
_item.mandatory_code no
_item_type.code int
_item_linked.child_name '_flr_probe_descriptor.reactive_probe_chem_descriptor_id'
_item_linked.parent_name '_ihm_chemical_component_descriptor.id'
save_
save__flr_probe_descriptor.chromophore_center_atom
_item_description.description
; The atom closest to the geometric center of the chromophore.
;
_item.name '_flr_probe_descriptor.chromophore_center_atom'
_item.category_id flr_probe_descriptor
_item.mandatory_code no
_item_type.code code
loop_
_item_examples.case
'give an example'
save_
save__flr_probe_descriptor.chromophore_chem_descriptor_id
_item_description.description
; An identifier to the chemical descriptor of the chromophore.
;
_item.name '_flr_probe_descriptor.chromophore_chem_descriptor_id'
_item.category_id flr_probe_descriptor
_item.mandatory_code no
_item_type.code int
_item_linked.child_name '_flr_probe_descriptor.chromophore_chem_descriptor_id'
_item_linked.parent_name '_ihm_chemical_component_descriptor.id'
save_
#############################
## FLR_POLY_PROBE_POSITION ##
#############################
save_flr_poly_probe_position
_category.description
; Data items in the FLR_POLY_PROBE_POSITION category records the
details of the positions in a polymeric entity labeled with a probe.
;
_category.id flr_poly_probe_position
_category.mandatory_code no
_category_key.name '_flr_poly_probe_position.id'
loop_
_category_group.id 'inclusive_group'
'flr_group'
loop_
_category_examples.detail
_category_examples.case
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
;
Example 1 -
;
;
# ... abbreviated ...
;
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
_pdbx_category_context.type CONTRIBUTED
_pdbx_category_context.category_id flr_poly_probe_position
save_
save__flr_poly_probe_position.id
_item_description.description
; A unique identifier for the category.
;
_item.name '_flr_poly_probe_position.id'
_item.category_id flr_poly_probe_position
_item.mandatory_code yes
_item_type.code int
save_
save__flr_poly_probe_position.entity_id
_item_description.description
; A unique identifier for the entity with the probe.
;
_item.name '_flr_poly_probe_position.entity_id'
_item.category_id flr_poly_probe_position
_item.mandatory_code yes
_item_type.code code
_item_linked.child_name '_flr_poly_probe_position.entity_id'
_item_linked.parent_name '_entity_poly_seq.entity_id'
save_
save__flr_poly_probe_position.entity_description
_item_description.description
; Description of the entity.
;
_item.name '_flr_poly_probe_position.entity_description'
_item.category_id flr_poly_probe_position
_item.mandatory_code no
_item_type.code line
_item_linked.child_name '_flr_poly_probe_position.entity_description'
_item_linked.parent_name '_entity.pdbx_description'
save_
save__flr_poly_probe_position.asym_id
_item_description.description
; An asym/strand identifier for the entity molecule with the probe.
This data item is a pointer to _struct_asym.id in the
STRUCT_ASYM category.
;
_item.name '_flr_poly_probe_position.asym_id'
_item.category_id flr_poly_probe_position
_item.mandatory_code no
_item_type.code code
_item_linked.child_name '_flr_poly_probe_position.asym_id'
_item_linked.parent_name '_struct_asym.id'
save_
save__flr_poly_probe_position.seq_id
_item_description.description
; The sequence index of the residue with the probe.
;
_item.name '_flr_poly_probe_position.seq_id'
_item.category_id flr_poly_probe_position
_item.mandatory_code yes
_item_type.code int
_item_linked.child_name '_flr_poly_probe_position.seq_id'
_item_linked.parent_name '_entity_poly_seq.num'
save_
save__flr_poly_probe_position.comp_id
_item_description.description
; The component identifier of the residue with the probe.
;
_item.name '_flr_poly_probe_position.comp_id'
_item.category_id flr_poly_probe_position
_item.mandatory_code yes
_item_type.code ucode
_item_linked.child_name '_flr_poly_probe_position.comp_id'
_item_linked.parent_name '_entity_poly_seq.mon_id'
save_
save__flr_poly_probe_position.atom_id
_item_description.description
; The atom identifier of the residue component where the probe is attached.