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  1. RNAelem RNAelem Public

    RNAelem is a tool for learning secondary structural motifs from a set of RNA sequences.

    C++ 3

  2. HMM HMM Public

    HMM - viterbi, forward, backward, Baum Welch [for study]

    C++ 4 2

  3. UTF8 decoder class for cpp string UTF8 decoder class for cpp string
    1
    class utf8 {
    2
      vector<uint32_t> _codes;
    3
      string _s;
    4
    
                  
    5
      int nunits(unsigned char byte) {
  4. automaton automaton Public

    Automaton algorithms [for study]

    JavaScript 2

  5. RNAbpp RNAbpp Public

    Just report base pairing probabilities with some formats.

    C++

  6. RNAlogo RNAlogo Public

    A Sequence Logo generator for any biosequences in SVG format

    C++