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DESCRIPTION
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DESCRIPTION
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Package: hierfstat
Version: 0.5-11
Date: 2022-05-03
Title: Estimation and Tests of Hierarchical F-Statistics
Authors@R: c(person("Jerome","Goudet",role=c("aut","cre"),email="jerome.goudet@unil.ch"),
person("Thibaut","Jombart",role="aut",email="t.jombart@imperial.ac.uk"),
person("Zhian N.","Kamvar",role="ctb"),
person("Eric","Archer",role="ctb"),
person("Olivier","Hardy",role="ctb"))
Author: Jerome Goudet [aut, cre],
Thibaut Jombart [aut],
Zhian N. Kamvar [ctb],
Eric Archer [ctb],
Olivier Hardy [ctb]
Maintainer: Jerome Goudet <jerome.goudet@unil.ch>
Imports:
ade4,adegenet,gaston,gtools,methods
Suggests:
ape,
pegas,
knitr,
rmarkdown,
testthat
Description: Estimates hierarchical F-statistics from haploid or
diploid genetic data with any numbers of levels in the hierarchy, following the
algorithm of Yang (Evolution(1998), 52:950).
Tests via randomisations the significance
of each F and variance components, using the likelihood-ratio statistics G
(Goudet et al. (1996) <https://academic.oup.com/genetics/article/144/4/1933/6017091>).
Estimates genetic diversity statistics
for haploid and diploid genetic datasets in various formats, including inbreeding and
coancestry coefficients, and population specific F-statistics following
Weir and Goudet (2017) <https://academic.oup.com/genetics/article/206/4/2085/6072590>.
Depends:
R (>= 2.10)
License: GPL (>=2)
URL: https://www.r-project.org, https://github.com/jgx65/hierfstat
BugReports: https://github.com/jgx65/hierfstat/issues
VignetteBuilder: knitr
RoxygenNote: 7.1.1