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What does it mean when a pathway is not identified within a sample? #212

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RunyuXia opened this issue Aug 8, 2024 · 0 comments
Open

What does it mean when a pathway is not identified within a sample? #212

RunyuXia opened this issue Aug 8, 2024 · 0 comments

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@RunyuXia
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RunyuXia commented Aug 8, 2024

Hi! I'm running CellChat on individual samples, and I've noticed that certain signaling pathways are only identified in specific samples. When I try to extract these pathways for some samples, CellChat indicates that the signaling pathway doesn't exist. Could you explain what this means and how it differs from a situation where the probability is equal to 0?
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