diff --git a/notebooks/hiAPP_clustering.ipynb b/notebooks/hiAPP_clustering.ipynb index aaeee96..34ebe69 100644 --- a/notebooks/hiAPP_clustering.ipynb +++ b/notebooks/hiAPP_clustering.ipynb @@ -18,7 +18,7 @@ }, { "cell_type": "code", - "execution_count": 33, + "execution_count": 1, "metadata": { "scrolled": true }, @@ -124,7 +124,7 @@ }, { "cell_type": "code", - "execution_count": 4, + "execution_count": 3, "metadata": { "scrolled": true }, @@ -143,7 +143,7 @@ "name": "stderr", "output_type": "stream", "text": [ - "100%|██████████| 10/10 [00:02<00:00, 3.76it/s]\n" + "100%|██████████| 10/10 [00:02<00:00, 3.66it/s]\n" ] } ], @@ -1560,7 +1560,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 4, "metadata": {}, "outputs": [], "source": [ @@ -1569,7 +1569,7 @@ }, { "cell_type": "code", - "execution_count": 7, + "execution_count": 5, "metadata": { "scrolled": true }, @@ -1578,7 +1578,7 @@ "name": "stderr", "output_type": "stream", "text": [ - "100%|██████████| 100/100 [00:07<00:00, 13.56it/s]\n" + "100%|██████████| 100/100 [00:06<00:00, 14.31it/s]\n" ] } ], @@ -1599,7 +1599,7 @@ }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 6, "metadata": { "scrolled": true }, @@ -1608,7 +1608,7 @@ "name": "stderr", "output_type": "stream", "text": [ - "100%|██████████| 100/100 [00:00<00:00, 446677.74it/s]\n" + "100%|██████████| 100/100 [00:00<00:00, 427118.53it/s]\n" ] } ], @@ -1626,7 +1626,7 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": 7, "metadata": {}, "outputs": [], "source": [ @@ -1635,7 +1635,7 @@ }, { "cell_type": "code", - "execution_count": 10, + "execution_count": 8, "metadata": { "scrolled": true }, @@ -1660,7 +1660,7 @@ }, { "cell_type": "code", - "execution_count": 11, + "execution_count": 9, "metadata": { "scrolled": true }, @@ -1689,7 +1689,7 @@ }, { "cell_type": "code", - "execution_count": 12, + "execution_count": 10, "metadata": { "scrolled": true }, @@ -2506,7 +2506,7 @@ }, { "cell_type": "code", - "execution_count": 13, + "execution_count": 11, "metadata": { "scrolled": true }, @@ -2541,7 +2541,7 @@ }, { "cell_type": "code", - "execution_count": 14, + "execution_count": 12, "metadata": { "scrolled": true }, @@ -3365,7 +3365,7 @@ }, { "cell_type": "code", - "execution_count": 15, + "execution_count": 13, "metadata": { "scrolled": true }, @@ -3384,7 +3384,7 @@ }, { "cell_type": "code", - "execution_count": 16, + "execution_count": 14, "metadata": { "scrolled": true }, @@ -3430,7 +3430,7 @@ }, { "cell_type": "code", - "execution_count": 17, + "execution_count": 15, "metadata": { "scrolled": true }, @@ -3452,7 +3452,7 @@ }, { "cell_type": "code", - "execution_count": 18, + "execution_count": 16, "metadata": { "scrolled": true }, @@ -3460,7 +3460,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "1726a1f69a0e4048b8cd0dad62a386dc", + "model_id": "632cf402bd564fb4a495db7ebcb76503", "version_major": 2, "version_minor": 0 }, @@ -3479,7 +3479,7 @@ }, { "cell_type": "code", - "execution_count": 19, + "execution_count": 17, "metadata": { "scrolled": true }, @@ -3487,7 +3487,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "54e2c7d7f0f34d908793fbb548cdee12", + "model_id": "befedc98d5e1438bb2a60a68479a5ec6", "version_major": 2, "version_minor": 0 }, @@ -3506,7 +3506,7 @@ }, { "cell_type": "code", - "execution_count": 20, + "execution_count": 18, "metadata": { "scrolled": true }, @@ -3514,7 +3514,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "30add08342934433a98a731be7f17089", + "model_id": "8f177a6b211b486eb3b3f485b020e2e1", "version_major": 2, "version_minor": 0 }, @@ -3552,7 +3552,7 @@ }, { "cell_type": "code", - "execution_count": 21, + "execution_count": 19, "metadata": { "scrolled": true }, @@ -3583,7 +3583,7 @@ }, { "cell_type": "code", - "execution_count": 22, + "execution_count": 20, "metadata": { "scrolled": true }, @@ -3594,7 +3594,7 @@ }, { "cell_type": "code", - "execution_count": 23, + "execution_count": 21, "metadata": { "scrolled": true }, @@ -5981,7 +5981,7 @@ "[None, None, None]" ] }, - "execution_count": 23, + "execution_count": 21, "metadata": {}, "output_type": "execute_result" } @@ -6012,7 +6012,7 @@ }, { "cell_type": "code", - "execution_count": 24, + "execution_count": 22, "metadata": { "scrolled": true }, @@ -8399,7 +8399,7 @@ "[None, None, None]" ] }, - "execution_count": 24, + "execution_count": 22, "metadata": {}, "output_type": "execute_result" } @@ -8430,7 +8430,7 @@ }, { "cell_type": "code", - "execution_count": 25, + "execution_count": 23, "metadata": { "scrolled": true }, @@ -10817,7 +10817,7 @@ "[None, None, None]" ] }, - "execution_count": 25, + "execution_count": 23, "metadata": {}, "output_type": "execute_result" } @@ -10836,7 +10836,7 @@ }, { "cell_type": "code", - "execution_count": 26, + "execution_count": 24, "metadata": { "scrolled": true }, @@ -10845,7 +10845,7 @@ "name": "stderr", "output_type": "stream", "text": [ - "100%|██████████| 100/100 [00:33<00:00, 2.96it/s]\n" + "100%|██████████| 100/100 [00:31<00:00, 3.22it/s]\n" ] } ], @@ -10868,7 +10868,7 @@ }, { "cell_type": "code", - "execution_count": 27, + "execution_count": 25, "metadata": { "scrolled": true }, @@ -13255,7 +13255,7 @@ "[None, None, None]" ] }, - "execution_count": 27, + "execution_count": 25, "metadata": {}, "output_type": "execute_result" } @@ -13274,7 +13274,7 @@ }, { "cell_type": "code", - "execution_count": 32, + "execution_count": 26, "metadata": { "scrolled": true }, @@ -13293,7 +13293,7 @@ }, { "cell_type": "code", - "execution_count": 34, + "execution_count": 27, "metadata": {}, "outputs": [], "source": [ @@ -13309,7 +13309,7 @@ }, { "cell_type": "code", - "execution_count": 35, + "execution_count": 28, "metadata": {}, "outputs": [ {