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Fast identification of good lambda's values for Box-Cox transforms

Transportation costs, transit times and trip lengths are often included in random utility functions used in multinomial logit models. As they only partially explain modal choice decisions and they are correlated, Box-Cox transformations may help to obtain better estimators with the expected signs.

This project presents, in a systematic and visual way, the impact that Box-Cox transforms have on the Log-Likelihood of the models.

It also presents a specific shotgun hill climbing meta-heuristic with backtracking capabilities, able to quickly identify the optimal Box-Cox lambda parameters to use when multiple independent variables must be transformed.

A special attention is paid to its simplicity, in order to make its implementation easy by practitioners in the framework of real-world problems.

Input data

A complete large dataset is included, representing freight transport in Europe by road, inland waterways and railways, for 10 groups of commodities (NST/R chapters 0-9). The origin-destination matrices and the networks come from the ETISPlus FP7 European research project. The input data for the logit models (cost, transit time and trip length for all the origin-destination pairs and group of commodities) were computed using the Nodus freight transportation network model. The data is stored in the "europeL2-Input.Rda" file, which contains a single R dataframe named "inputData".

A complete discussion on how to implement a weighted conditional multinomial logit model on aggregated data using the same dataset as the one included in this project can be found in Cost, transit time and speed elasticity calculations for the European continental freight transport. Specific R code used for this publication can also be found in the BoxCoxLogit GitHub project.

Brute force solutions

The "BruteForce.R" script computes a logit model using utility functions with one, two or three explanatory variables that are Box-Cox transformed. All the (combinations) of lambda('s) are tested in a given range and for a given granularity (step size). The range is set to -2:+2 with a step of 0.1, but these values can be changed. By default, 41 values of lambda are thus tested for each independent variable. That means that 41 logit models are computed for the univariate case, but that 41² and 41³ logits must be computed for the bivariate and trivariate cases respectively. As the dataset contains figures for 10 groups of commodities, the amount of logits to compute for the univariate, bivariate and trivariate cases are equal to 410, 16 810 and 689 210, which can take a very long computing time. Therefore, the results for the three cases are provided in the "europeL2-01-BruteForceX.Rda", where "X" is equal to "1", "2" or "3". The "01" in the name of the file indicates that the problem was solved with a step of 0.1.

Each of these files contain a single dataframe named "bfSolutions". It contains a row for every lambda or combinations of lambda's and group of commodities. Each row contains the Log-Likelihood of the model, the values of the estimated parameters and their level of significance. An "error" code is also given: a blank value means that the model gives the expected (negative) sign for the estimators of all the explanatory variable.

Heuristic solutions

In order to reduce the needed logits to compute, a meta-heuristic is proposed, explained and validated in "Heuristic.pdf". Its R implementation is proposed in "Heuristic.R". This script uses the same input data as "BruteForce.R" and it can be run for a given group of commodities and for 1, 2 or 3 explanatory variables.

The "HeuristicVsBruteForce.R" script compares the results of the heuristic to the "exact" best solutions identified by the brute force approach. A complete discussion about this can be found in the "performance" section of "Heuristic.pdf". This script also stores the solutions tested by the heuristic in the "europeL2-01-HeuristicX.Rda" files, which contain a single dataframe named "heuristicPath". This output can be used to plot the "path" used by the heuristic towards a solution.

Plots

The "Plot-BC1.R", "Plot-BC2.R" and "Plot-BC3.R" propose interactive plots that illustrate the impact of the combination(s) of lambda('s) on the Log-Likelihood in the cases of univariate, bivariate and trivariate cases. The "group" variable can be modified to choose the group of commodities to plot. One can also plot the unconstrained max Log-Likelighood if wanted. It is represented by a red dot if it is different from the best "valid" solution (green dot).

Finally, one can also plot the solutions tested by the heuristic during its path towards a solution. These solutions are represented by black dots and the final solution is represented by a blue dot if it is different from the "exact" best solution identified by the brute force approach (green dot).

Note that some black dots can be "in the middle of nowhere". These are solutions tested during the first phase of the heuristic (random draws of combinations of lambdas) and that don't correspond to "valid" solutions.

This is an example plot (bivariate case, NST-R 7):

Example plot

Other R scripts

The main R scripts are those that are cited before (BruteForce.R, Heuristic.R, HeuristicVsBruteForce.R and the three Plot-BCX.R scripts).

Some pieces of R code are common to several scripts. They are "sourced" from within the main scripts:

  • _BoxCoxLogitSolver : prepares the data for a weighted conditional multinomial logit and solves it using the mnlogit R package. It returns the solved model.
  • _Utils.R : several convenience functions: testing signs of the estimators, retrieving their significance level, draw random combinations of lambda's...

Needed R packages

The following R packages (available on CRAN) are needed to run the scripts: car, mlogit, mnlogit, rgl.