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Rename align_(PE/SE)(_paired) CI #1502: Commit 66be63c pushed by marcelm
November 20, 2023 12:32 1m 35s pairedend
pairedend
November 20, 2023 12:32 1m 35s
Choose random mapping locations for multimappers CI #1501: Pull request #364 synchronize by marcelm
November 17, 2023 16:15 5s shuffle-nams
shuffle-nams
November 17, 2023 16:15 5s
Pick same alignment even if max_secondary>0 CI #1500: Commit e8e5ec3 pushed by marcelm
November 17, 2023 16:15 1m 6s shuffle-nams
shuffle-nams
November 17, 2023 16:15 1m 6s
Merge pull request #365 from ksahlin/secondary CI #1499: Commit 24d4861 pushed by marcelm
November 17, 2023 14:19 1m 39s main
main
November 17, 2023 14:19 1m 39s
Test secondary alignments CI #1498: Pull request #365 opened by marcelm
November 17, 2023 13:02 4s secondary
secondary
November 17, 2023 13:02 4s
Test secondary alignments CI #1497: Commit 35bbd64 pushed by marcelm
November 17, 2023 12:58 1m 28s secondary
secondary
November 17, 2023 12:58 1m 28s
Choose random mapping locations for multimappers CI #1496: Pull request #364 synchronize by marcelm
November 16, 2023 16:36 4s shuffle-nams
shuffle-nams
November 16, 2023 16:36 4s
Shuffle NAMs even for paired ends CI #1495: Commit 57fe7df pushed by marcelm
November 16, 2023 16:36 1m 4s shuffle-nams
shuffle-nams
November 16, 2023 16:36 1m 4s
Choose random mapping locations for multimappers CI #1494: Pull request #364 opened by marcelm
November 16, 2023 15:49 4s shuffle-nams
shuffle-nams
November 16, 2023 15:49 4s
Choose random mapping locations for single-end multimappers CI #1493: Commit a30d779 pushed by marcelm
November 16, 2023 15:49 1m 36s shuffle-nams
shuffle-nams
November 16, 2023 15:49 1m 36s
Choose random mapping locations for single-end multimappers CI #1492: Commit f9be9bb pushed by marcelm
November 16, 2023 15:42 1m 31s shuffle-nams
shuffle-nams
November 16, 2023 15:42 1m 31s
Assign single-end multimappers more randomly to a mapping site CI #1491: Commit f035021 pushed by marcelm
November 16, 2023 14:47 1m 36s namshuffle
namshuffle
November 16, 2023 14:47 1m 36s
Assigning single-end multimappers more randomly to a mapping site CI #1490: Commit ec422ab pushed by marcelm
November 16, 2023 13:59 1m 33s nam-shuffle
nam-shuffle
November 16, 2023 13:59 1m 33s
Assign single-end multimappers to a more random mapping site CI #1489: Commit 76995c2 pushed by marcelm
November 16, 2023 13:58 1m 17s nam-shuffle
nam-shuffle
November 16, 2023 13:58 1m 17s
Merge pull request #328 from ksahlin/mapq CI #1488: Commit 8c74210 pushed by marcelm
November 15, 2023 16:56 1m 2s main
main
November 15, 2023 16:56 1m 2s
Rework single-end MAPQ computation CI #1487: Pull request #328 synchronize by marcelm
November 15, 2023 15:44 4s mapq
mapq
November 15, 2023 15:44 4s
Ensure we never report MAPQ=0 if best and 2nd best score differs CI #1486: Commit 9120362 pushed by marcelm
November 15, 2023 15:44 1m 45s mapq
mapq
November 15, 2023 15:44 1m 45s
Rework single-end MAPQ computation CI #1485: Pull request #328 synchronize by marcelm
November 15, 2023 15:38 5s mapq
mapq
November 15, 2023 15:38 5s
Ensure we never report MAPQ=0 if best and 2nd best score differs CI #1484: Commit acac70b pushed by marcelm
November 15, 2023 15:38 1m 21s mapq
mapq
November 15, 2023 15:38 1m 21s
Merge pull request #363 from ksahlin/paf-end CI #1483: Commit 3578904 pushed by marcelm
November 15, 2023 10:24 1m 14s main
main
November 15, 2023 10:24 1m 14s
Fix matches ending too early in PAF output CI #1482: Pull request #363 synchronize by marcelm
November 15, 2023 10:21 5s paf-end
paf-end
November 15, 2023 10:21 5s
Fix matches ending too early in PAF output CI #1481: Commit ca12465 pushed by marcelm
November 15, 2023 10:21 1m 51s paf-end
paf-end
November 15, 2023 10:21 1m 51s
Merge pull request #358 from ksahlin/revert-parameter-tuning CI #1480: Commit 1123248 pushed by marcelm
November 15, 2023 10:17 2m 2s main
main
November 15, 2023 10:17 2m 2s
Revert parameter tuning commits CI #1479: Pull request #358 synchronize by marcelm
November 15, 2023 10:16 4s revert-parameter-tuning
revert-parameter-tuning
November 15, 2023 10:16 4s
Update baseline commit CI #1478: Commit ac8ec75 pushed by marcelm
November 15, 2023 10:14 2m 40s revert-parameter-tuning
revert-parameter-tuning
November 15, 2023 10:14 2m 40s
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