From 9c6a9759135282b5ef72ade34b02959f8fd1cc57 Mon Sep 17 00:00:00 2001 From: Marcel Martin Date: Tue, 1 Oct 2024 09:53:52 +0200 Subject: [PATCH] Enable mcs --- src/main.cpp | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/main.cpp b/src/main.cpp index 30f5c368..422ddfce 100644 --- a/src/main.cpp +++ b/src/main.cpp @@ -196,7 +196,7 @@ int run_strobealign(int argc, char **argv) { map_param.dropoff_threshold = opt.dropoff_threshold; map_param.rescue_level = opt.rescue_level; map_param.max_tries = opt.max_tries; - map_param.use_mcs = false; //opt.r < 200; + map_param.use_mcs = true; //opt.r < 200; map_param.output_format = ( opt.is_abundance_out ? OutputFormat::Abundance : opt.is_sam_out ? OutputFormat::SAM :