{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":195992077,"defaultBranch":"master","name":"AnnotSV","ownerLogin":"lgmgeo","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2019-07-09T11:05:44.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/49909073?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1725542528.0","currentOid":""},"activityList":{"items":[{"before":"6c3e439fe075f4d21a9c88738db82b52387313fc","after":"d20fd35999902f41b9d60d32ea26d0e4599cde49","ref":"refs/heads/master","pushedAt":"2024-09-05T13:23:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Temporary fix for issues #239 and #250 (wrong PRDM10 line in the GenCC file) v3.4.4","shortMessageHtmlLink":"feat: Temporary fix for issues #239 and #250 (wrong PRDM10 line in th…"}},{"before":"6c3e439fe075f4d21a9c88738db82b52387313fc","after":"d20fd35999902f41b9d60d32ea26d0e4599cde49","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-09-05T13:21:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Temporary fix for issues #239 and #250 (wrong PRDM10 line in the GenCC file) v3.4.4","shortMessageHtmlLink":"feat: Temporary fix for issues #239 and #250 (wrong PRDM10 line in th…"}},{"before":"60d3f97c144b2ce3deab82d4c322cd4b5b4a774b","after":"6c3e439fe075f4d21a9c88738db82b52387313fc","ref":"refs/heads/master","pushedAt":"2024-08-29T08:00:19.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.3","shortMessageHtmlLink":"v3.4.3"}},{"before":"306a931e6d11a6258fd3ec6881f54b26005ae9a6","after":"6c3e439fe075f4d21a9c88738db82b52387313fc","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-08-29T07:59:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.3","shortMessageHtmlLink":"v3.4.3"}},{"before":"fa9d8db8e50ca072b6537065caccafedaa8461a3","after":"306a931e6d11a6258fd3ec6881f54b26005ae9a6","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-08-08T15:05:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: New definition of alias gene symbols used in OMIM annotation files.\n\nKeep only aliases found with the NCBI_gene_ID and validated with genomic locations","shortMessageHtmlLink":"feat: New definition of alias gene symbols used in OMIM annotation fi…"}},{"before":"a4279ca3d90314b0936ca2c01d8bd670acacf81a","after":"fa9d8db8e50ca072b6537065caccafedaa8461a3","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-08-06T11:24:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Add a new check for the variantconvert configuration (issue #246)","shortMessageHtmlLink":"feat: Add a new check for the variantconvert configuration (issue #246)"}},{"before":"b8e305e39509b19b98e0658c964bb90feec76516","after":"a4279ca3d90314b0936ca2c01d8bd670acacf81a","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-08-01T08:26:30.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM (e.g. 15) (issue #247)","shortMessageHtmlLink":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contai…"}},{"before":"25d4651c6597363f415e4e41798deae6a515161c","after":"b8e305e39509b19b98e0658c964bb90feec76516","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-08-01T08:25:54.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM ( e.g. 15) ( issue #247 )","shortMessageHtmlLink":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contai…"}},{"before":"0b9fcb4b89320ef2e0e710148d39ddf649771bf8","after":"25d4651c6597363f415e4e41798deae6a515161c","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-26T14:31:47.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM (e.g. 1)","shortMessageHtmlLink":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contai…"}},{"before":"c59e2d4e3255d039e11087bc94455e49aca178a6","after":"0b9fcb4b89320ef2e0e710148d39ddf649771bf8","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-24T06:45:09.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM (e.g. 1)","shortMessageHtmlLink":"feat: Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contai…"}},{"before":"f133c0578d31cc3cc7e181f36c6978a620f37582","after":"c59e2d4e3255d039e11087bc94455e49aca178a6","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-23T17:22:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM (e.g. 1)","shortMessageHtmlLink":"Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in…"}},{"before":"a7a58617d884c78587dd165cc7583022be80d8f1","after":"f133c0578d31cc3cc7e181f36c6978a620f37582","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-09T11:26:46.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"doc: Add information in the README.md","shortMessageHtmlLink":"doc: Add information in the README.md"}},{"before":"ff9b0b1ece547eab9c6306f5b2590c09017dc66c","after":"a7a58617d884c78587dd165cc7583022be80d8f1","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-09T09:00:46.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"doc: Add information in the README.md","shortMessageHtmlLink":"doc: Add information in the README.md"}},{"before":"675ab3c19437e2e5116e4ffb6bde10fc442b2f3b","after":"ff9b0b1ece547eab9c6306f5b2590c09017dc66c","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-09T08:31:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"doc: Add information in the README.md","shortMessageHtmlLink":"doc: Add information in the README.md"}},{"before":"60d3f97c144b2ce3deab82d4c322cd4b5b4a774b","after":"675ab3c19437e2e5116e4ffb6bde10fc442b2f3b","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-07-01T13:21:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"feat: Add alias gene symbols in the OMIM annotations file","shortMessageHtmlLink":"feat: Add alias gene symbols in the OMIM annotations file"}},{"before":"2077ac55ada49627beb7dc7fa2be3e3db32155e2","after":null,"ref":"refs/tags/v3.4.2","pushedAt":"2024-05-14T08:29:05.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"}},{"before":"3067981c77d6d09fea137a6258807df4134478d7","after":"60d3f97c144b2ce3deab82d4c322cd4b5b4a774b","ref":"refs/heads/master","pushedAt":"2024-05-14T08:26:22.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2\n\n- fix: Fix a bug when setting the cytoband annotation for large SV (issue 234)\n- fix: Update the mm39 repeat annotations (issue 225)","shortMessageHtmlLink":"v3.4.2"}},{"before":"c7239bd8ae818c5fae764688088048545a8a4328","after":"60d3f97c144b2ce3deab82d4c322cd4b5b4a774b","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-14T08:24:11.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2\n\n- fix: Fix a bug when setting the cytoband annotation for large SV (issue 234)\n- fix: Update the mm39 repeat annotations (issue 225)","shortMessageHtmlLink":"v3.4.2"}},{"before":"3067981c77d6d09fea137a6258807df4134478d7","after":"c7239bd8ae818c5fae764688088048545a8a4328","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-14T08:11:05.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2\n\n- fix: Fix a bug when setting the cytoband annotation for large SV (issue 234)\n- fix: Update the mm39 repeat annotations (issue 225)","shortMessageHtmlLink":"v3.4.2"}},{"before":"e1dad280fc5ba0bf0d3d7e5097845c856921b476","after":"3067981c77d6d09fea137a6258807df4134478d7","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-14T08:01:43.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"Merge branch 'patch_AnnotSV'\n\n* patch_AnnotSV:\n v3.4.2","shortMessageHtmlLink":"Merge branch 'patch_AnnotSV'"}},{"before":"5a87183880f4ed01c1959df552d65b9694378fd1","after":"3067981c77d6d09fea137a6258807df4134478d7","ref":"refs/heads/master","pushedAt":"2024-05-14T07:59:11.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"Merge branch 'patch_AnnotSV'\n\n* patch_AnnotSV:\n v3.4.2","shortMessageHtmlLink":"Merge branch 'patch_AnnotSV'"}},{"before":"d7610ef400e92381a58dc700673bea638e68b461","after":"e1dad280fc5ba0bf0d3d7e5097845c856921b476","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-14T07:57:31.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2\n\n- fix: Fix a bug when setting the cytoband annotation for large SV (issue 234)\n- fix: Update the mm39 repeat annotations (issue 225)","shortMessageHtmlLink":"v3.4.2"}},{"before":"c069392deacc69a3642278641553dccb96618d65","after":"5a87183880f4ed01c1959df552d65b9694378fd1","ref":"refs/heads/master","pushedAt":"2024-05-14T07:51:18.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2\n\n- fix: Fix a bug when setting the cytoband annotation for large SV (issue 234)\n- fix: Update the mm39 repeat annotations (issue 225)","shortMessageHtmlLink":"v3.4.2"}},{"before":"267a5f2d5dc82f0fedf68d814dc15abf5841270a","after":null,"ref":"refs/tags/v3.4.2","pushedAt":"2024-05-14T07:26:49.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"}},{"before":"c069392deacc69a3642278641553dccb96618d65","after":"d7610ef400e92381a58dc700673bea638e68b461","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-14T07:22:15.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2","shortMessageHtmlLink":"v3.4.2"}},{"before":"05ee9690b3db9b4200d3a1671a2ebda265493145","after":"c069392deacc69a3642278641553dccb96618d65","ref":"refs/heads/master","pushedAt":"2024-05-14T06:23:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2","shortMessageHtmlLink":"v3.4.2"}},{"before":"05ee9690b3db9b4200d3a1671a2ebda265493145","after":"c069392deacc69a3642278641553dccb96618d65","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-14T06:22:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"v3.4.2","shortMessageHtmlLink":"v3.4.2"}},{"before":"22774c68e4f5b7b44375adbb81054179b52d9c14","after":"05ee9690b3db9b4200d3a1671a2ebda265493145","ref":"refs/heads/master","pushedAt":"2024-05-06T09:37:45.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"New official release: 3.4.1","shortMessageHtmlLink":"New official release: 3.4.1"}},{"before":"18202c997fb039127745dec49e84271fffe67a5e","after":"05ee9690b3db9b4200d3a1671a2ebda265493145","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-06T08:08:58.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"New official release: 3.4.1","shortMessageHtmlLink":"New official release: 3.4.1"}},{"before":"ac7c1098662d85148547f4e96e247f8b09592e48","after":"18202c997fb039127745dec49e84271fffe67a5e","ref":"refs/heads/patch_AnnotSV","pushedAt":"2024-05-06T07:24:33.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lgmgeo","name":"Geoffroy Véronique","path":"/lgmgeo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/49909073?s=80&v=4"},"commit":{"message":"New official release: 3.4.1","shortMessageHtmlLink":"New official release: 3.4.1"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEreBUywA","startCursor":null,"endCursor":null}},"title":"Activity · lgmgeo/AnnotSV"}