build.gradle

import de.undercouch.gradle.tasks.download.Download
apply plugin: 'com.github.ben-manes.versions'

buildscript {
    repositories {
        jcenter()
    }

    dependencies {
        classpath 'com.bmuschko:gradle-tomcat-plugin:2.2.2'
        classpath 'de.undercouch:gradle-download-task:3.1.0'
	    classpath 'com.github.ben-manes:gradle-versions-plugin:+'
    }
}

group 'nl.strohalm'
version '3.7.3'

apply plugin: 'java'
apply plugin: 'war'
apply plugin: 'com.bmuschko.tomcat'
apply plugin: 'de.undercouch.download'

sourceCompatibility = 1.8

repositories {
    jcenter()
    flatDir {
        dirs 'libs'
    }
    maven {
       url 'http://52north.org/maven/repo/releases/'
    }
}

configurations {
    embeddedJetty
}

dependencies {
    // I copied the versions from the jar file names in the Cyclos lib folder.

    // Antlr
    // http://mvnrepository.com/artifact/antlr/antlr
    //compile group: 'antlr', name: 'antlr', version: '2.7.7'
    compile group: 'org.antlr', name: 'antlr4-runtime', version: '4.5.3'

    // AOP Alliance
    // http://mvnrepository.com/artifact/aopalliance/aopalliance
    compile group: 'aopalliance', name: 'aopalliance', version: '1.0'

    // Apache
    // Commons
    // http://mvnrepository.com/artifact/commons-beanutils/commons-beanutils
    compile group: 'commons-beanutils', name: 'commons-beanutils', version: '1.9.2'
    // http://mvnrepository.com/artifact/commons-chain/commons-chain
    compile group: 'commons-chain', name: 'commons-chain', version: '1.2'
    // http://mvnrepository.com/artifact/commons-cli/commons-cli
    compile group: 'commons-cli', name: 'commons-cli', version: '1.3.1'
    // http://mvnrepository.com/artifact/commons-codec/commons-codec
    compile group: 'commons-codec', name: 'commons-codec', version: '1.10'
    // http://mvnrepository.com/artifact/commons-collections/commons-collections
    compile group: 'commons-collections', name: 'commons-collections', version: '3.2.2'
    // http://mvnrepository.com/artifact/commons-digester/commons-digester
    compile group: 'commons-digester', name: 'commons-digester', version: '2.1'
    // http://mvnrepository.com/artifact/commons-fileupload/commons-fileupload
    compile group: 'commons-fileupload', name: 'commons-fileupload', version: '1.1'
    // http://mvnrepository.com/artifact/org.apache.httpcomponents/httpclient
    compile group: 'org.apache.httpcomponents', name: 'httpclient', version: '4.5.2'
    // http://mvnrepository.com/artifact/commons-io/commons-io
    compile group: 'commons-io', name: 'commons-io', version: '1.3.1'
    // http://mvnrepository.com/artifact/org.apache.commons/commons-lang3
    compile group: 'org.apache.commons', name: 'commons-lang3', version: '3.4'
    // http://mvnrepository.com/artifact/commons-logging/commons-logging
    compile group: 'commons-logging', name: 'commons-logging', version: '1.2'
    // http://mvnrepository.com/artifact/org.apache.commons/commons-math3
    compile group: 'org.apache.commons', name: 'commons-math3', version: '3.6.1'
    // http://mvnrepository.com/artifact/org.apache.ws.xmlschema/xmlschema-core
    compile group: 'org.apache.ws.xmlschema', name: 'xmlschema-core', version: '2.2.1'
    // CXF
    // https://mvnrepository.com/artifact/org.apache.cxf/cxf-bundle-compatible
    compile group: 'org.apache.cxf', name: 'cxf-bundle-compatible', version: '3.1.6'
    // Log4j
    // http://mvnrepository.com/artifact/log4j/log4j
    compile group: 'log4j', name: 'log4j', version: '1.2.17'

    // Lucene

    // http://mvnrepository.com/artifact/org.apache.lucene/lucene-core
    compile group: 'org.apache.lucene', name: 'lucene-core', version: '4.10.4'

    // http://mvnrepository.com/artifact/org.apache.lucene/lucene-queryparser
    compile group: 'org.apache.lucene', name: 'lucene-queryparser', version: '4.10.4'

    // http://mvnrepository.com/artifact/org.apache.lucene/lucene-analyzers-common
    compile group: 'org.apache.lucene', name: 'lucene-analyzers-common', version: '4.10.4'

    // http://mvnrepository.com/artifact/org.apache.lucene/lucene-queries
    compile group: 'org.apache.lucene', name: 'lucene-queries', version: '4.10.4'

    // http://mvnrepository.com/artifact/org.apache.lucene/lucene-misc
    compile group: 'org.apache.lucene', name: 'lucene-misc', version: '4.10.4'

    // Neethi
    // http://mvnrepository.com/artifact/org.apache.neethi/neethi
    compile group: 'org.apache.neethi', name: 'neethi', version: '3.0.3'
    // Struts
    // http://mvnrepository.com/artifact/org.apache.struts/struts-core
    compile group: 'org.apache.struts', name: 'struts-core', version: '1.3.10'
    // http://mvnrepository.com/artifact/org.apache.struts/struts-extras
    compile group: 'org.apache.struts', name: 'struts-extras', version: '1.3.10'
    // http://mvnrepository.com/artifact/org.apache.struts/struts-taglib
    compile group: 'org.apache.struts', name: 'struts-taglib', version: '1.3.10'
    // http://mvnrepository.com/artifact/org.apache.struts/struts-tiles
    compile group: 'org.apache.struts', name: 'struts-tiles', version: '1.3.10'
    // XML Commons
    // http://mvnrepository.com/artifact/xml-resolver/xml-resolver
    compile group: 'xml-resolver', name: 'xml-resolver', version: '1.2'

    // ASM (2.2.2 of util was not available, so I used 2.2.3)
    // http://mvnrepository.com/artifact/asm/asm
    compile group: 'asm', name: 'asm', version: '3.3.1'
    // http://mvnrepository.com/artifact/asm/asm-commons
    compile group: 'org.ow2.asm', name: 'asm-commons', version: '4.1'
    // http://mvnrepository.com/artifact/asm/asm-util
    compile group: 'asm', name: 'asm-util', version: '3.3.1'

    // AspectJ compile (the jar file did not have a version, so I used the latest)
    // http://mvnrepository.com/artifact/org.aspectj/aspectjrt
    compile group: 'org.aspectj', name: 'aspectjrt', version: '1.8.9'
    // http://mvnrepository.com/artifact/org.aspectj/aspectjweaver
    compile group: 'org.aspectj', name: 'aspectjweaver', version: '1.8.9'

    // Avalon Framework
    // http://mvnrepository.com/artifact/avalon-framework/avalon-framework
    compile group: 'avalon-framework', name: 'avalon-framework', version: '4.1.5'

    // Batik
    // http://mvnrepository.com/artifact/org.apache.xmlgraphics/batik-awt-util
    compile group: 'org.apache.xmlgraphics', name: 'batik-awt-util', version: '1.8'
    // http://mvnrepository.com/artifact/org.apache.xmlgraphics/batik-dom
    compile group: 'org.apache.xmlgraphics', name: 'batik-dom', version: '1.8'
    // http://mvnrepository.com/artifact/org.apache.xmlgraphics/batik-svggen
    compile group: 'org.apache.xmlgraphics', name: 'batik-svggen', version: '1.8'
    // http://mvnrepository.com/artifact/org.apache.xmlgraphics/batik-util
    compile group: 'org.apache.xmlgraphics', name: 'batik-util', version: '1.8'
    // http://mvnrepository.com/artifact/org.apache.xmlgraphics/batik-xml
    compile group: 'org.apache.xmlgraphics', name: 'batik-xml', version: '1.8'

    // C3P0
    // http://mvnrepository.com/artifact/com.mchange/c3p0
    compile group: 'com.mchange', name: 'c3p0', version: '0.9.5.2'

    // Cewolf
    // http://mvnrepository.com/artifact/cewolf/cewolf
    compile(group: 'cewolf', name: 'cewolf', version: '1.0') {
        exclude group: 'crimson', module: 'crimson'
        exclude group: 'gnujaxp', module: 'gnujaxp'
    }

    // Cglib
    // http://mvnrepository.com/artifact/cglib/cglib-nodep
    compile group: 'cglib', name: 'cglib-nodep', version: '3.2.2'

    // Concurrent
    // http://mvnrepository.com/artifact/concurrent/concurrent
    compile group: 'concurrent', name: 'concurrent', version: '1.3.4'

    // Dom4j
    // http://mvnrepository.com/artifact/dom4j/dom4j
    compile group: 'dom4j', name: 'dom4j', version: '1.6.1'

    // Ehcache
    // http://mvnrepository.com/artifact/net.sf.ehcache/ehcache-core
    compile group: 'net.sf.ehcache', name: 'ehcache-core', version: '2.6.11'

    // Fastinfoset
    // http://mvnrepository.com/artifact/com.sun.xml.fastinfoset/FastInfoset
    compile group: 'com.sun.xml.fastinfoset', name: 'FastInfoset', version: '1.2.13'

    // Hazelcast
    // http://mvnrepository.com/artifact/com.hazelcast/hazelcast-all
    compile group: 'com.hazelcast', name: 'hazelcast-all', version: '3.6.3'

    // JPA API
    // https://mvnrepository.com/artifact/org.eclipse.persistence/javax.persistence
    compile group: 'org.eclipse.persistence', name: 'javax.persistence', version: '2.2.0'

    // Hibernate
    runtimeClasspath group: 'org.hibernate', name: 'hibernate-core', version: '5.2.1.Final'

    // EcliseLink
    runtimeClasspath group: 'org.eclipse.persistence', name: 'org.eclipse.persistence.jpa', version: '2.7.0'

    //// Jackson (An -all jar is in the lib directory, but Maven doesn't have one.)
    //// http://mvnrepository.com/artifact/org.codehaus.jackson/jackson-core-asl
    //compile group: 'org.codehaus.jackson', name: 'jackson-core-asl', version: '1.9.6'
    //// http://mvnrepository.com/artifact/org.codehaus.jackson/jackson-mapper-asl
    //compile group: 'org.codehaus.jackson', name: 'jackson-mapper-asl', version: '1.9.6'

    compile group: 'com.fasterxml.jackson.core', name: 'jackson-core', version: '2.7.4'
    compile group: 'com.fasterxml.jackson.core', name: 'jackson-databind', version: '2.7.4'
    compile group: 'com.fasterxml.jackson.core', name: 'jackson-annotations', version: '2.7.4'

    // JAMA
    // http://mvnrepository.com/artifact/gov.nist.math/jama
    compile group: 'gov.nist.math', name: 'jama', version: '1.0.3'

    // Java Extensions
    // http://mvnrepository.com/artifact/javax.activation/activation
    compile group: 'javax.activation', name: 'activation', version: '1.1.1'
    // http://mvnrepository.com/artifact/javax.transaction/jta
    compile group: 'javax.transaction', name: 'jta', version: '1.1'
    // http://mvnrepository.com/artifact/javax.mail/javax.mail-api
    compile group: 'javax.mail', name: 'javax.mail-api', version: '1.5.5'
    // http://mvnrepository.com/artifact/javax.servlet.jsp/javax.servlet.jsp-api
    providedCompile group: 'javax.servlet.jsp', name: 'javax.servlet.jsp-api', version: '2.3.1' // Not in the Cyclos lib directory, but required to be compiled.

    // Javassist
    // https://mvnrepository.com/artifact/org.javassist/javassist
compile group: 'org.javassist', name: 'javassist', version: '3.20.0-GA'


    // JavaStat
    compile name: 'javastat' // Sorry, I couldn't find JavaStat on Maven Central or jCenter. I grabbed the jar from Cyclos' lib directory.

    // JFree
    // http://mvnrepository.com/artifact/jfree/jcommon
    compile group: 'org.jfree', name: 'jcommon', version: '1.0.23'
    // http://mvnrepository.com/artifact/jfreechart/jfreechart
    compile group: 'org.jfree', name: 'jfreechart', version: '1.0.19'

    // JSci
    // http://mvnrepository.com/artifact/net.sf.jsci/jsci
    compile(group: 'net.sf.jsci', name: 'jsci', version: '1.2') {
        exclude group: 'xerces', module: 'xercesImpl'
    }

    // JSON.simple
    // http://mvnrepository.com/artifact/com.googlecode.json-simple/json-simple
    compile group: 'com.googlecode.json-simple', name: 'json-simple', version: '1.1'

    // Jstl
    // https://mvnrepository.com/artifact/javax.servlet.jsp.jstl/javax.servlet.jsp.jstl-api
    compile group: 'javax.servlet.jsp.jstl', name: 'javax.servlet.jsp.jstl-api', version: '1.2.1'

    // JTidy
    // http://mvnrepository.com/artifact/net.sf.jtidy/jtidy
    compile group: 'net.sf.jtidy', name: 'jtidy', version: 'r938'

    // Kaptcha
    compile group: 'com.github.penggle', name: 'kaptcha', version: '2.3.2'

    // Logkit
    // http://mvnrepository.com/artifact/logkit/logkit
    //compile group: 'logkit', name: 'logkit', version: '1.0.1'

    compile group: 'org.apache.avalon.logkit', name: 'avalon-logkit', version: '2.2.1'

    // MySQL Connector/J
    // http://mvnrepository.com/artifact/mysql/mysql-connector-java
    runtimeClasspath group: 'mysql', name: 'mysql-connector-java', version: '6.0.6'

    // Mariadb Client
    // http://mvnrepository.com/artifact/org.mariadb.jdbc/mariadb-java-client
    runtimeClasspath group: 'org.mariadb.jdbc', name: 'mariadb-java-client', version: '1.4.5'

    // https://mvnrepository.com/artifact/com.h2database/h2
    runtimeClasspath group: 'com.h2database', name: 'h2', version: '1.4.196'

    // Spring
    // http://mvnrepository.com/artifact/org.springframework/spring-aop
    compile group: 'org.springframework', name: 'spring-aop', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-beans
    compile group: 'org.springframework', name: 'spring-beans', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-context-support
    compile group: 'org.springframework', name: 'spring-context-support', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-context
    compile group: 'org.springframework', name: 'spring-context', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-core
    compile group: 'org.springframework', name: 'spring-core', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-expression
    compile group: 'org.springframework', name: 'spring-expression', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-jdbc
    compile group: 'org.springframework', name: 'spring-jdbc', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-orm
    compile group: 'org.springframework', name: 'spring-orm', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-tx
    compile group: 'org.springframework', name: 'spring-tx', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-web
    compile group: 'org.springframework', name: 'spring-web', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework/spring-webmvc
    compile group: 'org.springframework', name: 'spring-webmvc', version: '4.3.2.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework.security/spring-security-config
    compile group: 'org.springframework.security', name: 'spring-security-config', version: '4.1.0.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework.security/spring-security-core
    compile group: 'org.springframework.security', name: 'spring-security-core', version: '4.1.0.RELEASE'
    // http://mvnrepository.com/artifact/org.springframework.security/spring-security-web
    compile group: 'org.springframework.security', name: 'spring-security-web', version: '4.1.0.RELEASE'

    compile group: 'org.imgscalr', name: 'imgscalr-lib', version: '4.2'

    // SLF4J (I used 1.6 because Gradle wasn't happy with 1.5.6.)
    // http://mvnrepository.com/artifact/org.slf4j/slf4j-api
    compile group: 'org.slf4j', name: 'slf4j-api', version: '1.7.21'
    // http://mvnrepository.com/artifact/org.slf4j/slf4j-log4j12
    compile group: 'org.slf4j', name: 'slf4j-log4j12', version: '1.7.21'

    // SSLExt
    compile  group: 'sslext', name: 'sslext', version: '1.2-0'

    // Standard
    // http://mvnrepository.com/artifact/org.apache.taglibs/taglibs-standard-impl
    compile group: 'org.apache.taglibs', name: 'taglibs-standard-impl', version: '1.2.5'

    // WSDL4J
    // http://mvnrepository.com/artifact/wsdl4j/wsdl4j
    compile group: 'wsdl4j', name: 'wsdl4j', version: '1.6.3'

    tomcat "org.apache.tomcat.embed:tomcat-embed-core:8.0.36",
       "org.apache.tomcat.embed:tomcat-embed-logging-juli:8.0.36",
       "org.apache.tomcat.embed:tomcat-embed-jasper:8.0.36"

}

war {
    baseName 'cyclos'
}

task distZip(dependsOn: 'war', type: Zip) {
    baseName war.baseName

    from (zipTree(buildDir.toString() + '/libs/' + baseName + '-' + version + '.war')) {
        into 'web'
    }
}

task downloadTomcat(type: Download) {
    //src 'http://www-us.apache.org/dist/tomcat/tomcat-7/v7.0.69/bin/apache-tomcat-7.0.69.zip'
    src 'http://apache.mirrors.spacedump.net/tomcat/tomcat-8/v8.0.36/bin/apache-tomcat-8.0.36.zip'
    dest new File(buildDir, 'tomcat.zip')
}

task standalone(dependsOn: ['downloadTomcat', 'war'], type: Zip) {
    baseName distZip.baseName + '-standalone'

    from (zipTree(downloadTomcat.dest)) {
        into ''
        excludes.addAll(['apache-tomcat-8.0.36/webapps/ROOT/**/*', 'apache-tomcat-8.0.36/webapps/ROOT/*'])
    }

    from (zipTree(buildDir.toString() + '/libs/' + war.baseName + '-' + version + '.war')) {
        into 'apache-tomcat-8.0.36/webapps/ROOT'
    }
    
    from ('setenv.bat') {
        into 'apache-tomcat-8.0.36/bin'
    }
    
    from ('setenv.sh') {
        into 'apache-tomcat-8.0.36/bin'
    }
}

build.dependsOn distZip
build.dependsOn standalone