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test.sh
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test.sh
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#!/bin/bash
if [[ $OS_NAME == "macos" ]] && [[ $COMPILER == "gcc" ]]; then
export CXX=g++-10
export CC=gcc-10
elif [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "clang" ]]; then
export CXX=clang++
export CC=clang
fi
if [[ "${TASK}" == "r-package" ]]; then
bash ${BUILD_DIRECTORY}/.ci/test_r_package.sh || exit -1
exit 0
fi
conda create -q -y -n $CONDA_ENV python=$PYTHON_VERSION
source activate $CONDA_ENV
cd $BUILD_DIRECTORY
if [[ $TASK == "check-docs" ]] || [[ $TASK == "check-links" ]]; then
cd $BUILD_DIRECTORY/docs
conda install -q -y -n $CONDA_ENV -c conda-forge doxygen rstcheck
pip install --user -r requirements.txt
# check reStructuredText formatting
cd $BUILD_DIRECTORY/python-package
rstcheck --report warning `find . -type f -name "*.rst"` || exit -1
cd $BUILD_DIRECTORY/docs
rstcheck --report warning --ignore-directives=autoclass,autofunction,doxygenfile `find . -type f -name "*.rst"` || exit -1
# build docs
make html || exit -1
if [[ $TASK == "check-links" ]]; then
# check docs for broken links
pip install --user linkchecker
linkchecker --config=.linkcheckerrc ./_build/html/*.html || exit -1
exit 0
fi
# check the consistency of parameters' descriptions and other stuff
cp $BUILD_DIRECTORY/docs/Parameters.rst $BUILD_DIRECTORY/docs/Parameters-backup.rst
cp $BUILD_DIRECTORY/src/io/config_auto.cpp $BUILD_DIRECTORY/src/io/config_auto-backup.cpp
python $BUILD_DIRECTORY/helpers/parameter_generator.py || exit -1
diff $BUILD_DIRECTORY/docs/Parameters-backup.rst $BUILD_DIRECTORY/docs/Parameters.rst || exit -1
diff $BUILD_DIRECTORY/src/io/config_auto-backup.cpp $BUILD_DIRECTORY/src/io/config_auto.cpp || exit -1
exit 0
fi
if [[ $TASK == "lint" ]]; then
conda install -q -y -n $CONDA_ENV \
pycodestyle \
pydocstyle \
r-stringi # stringi needs to be installed separate from r-lintr to avoid issues like 'unable to load shared object stringi.so'
# r-xfun below has to be upgraded because lintr requires > 0.19 for that package
conda install -q -y -n $CONDA_ENV \
-c conda-forge \
libxml2 \
"r-xfun>=0.19" \
"r-lintr>=2.0"
pip install --user cpplint isort mypy
echo "Linting Python code"
pycodestyle --ignore=E501,W503 --exclude=./.nuget,./external_libs . || exit -1
pydocstyle --convention=numpy --add-ignore=D105 --match-dir="^(?!^external_libs|test|example).*" --match="(?!^test_|setup).*\.py" . || exit -1
isort . --check-only || exit -1
mypy --ignore-missing-imports python-package/ || true
echo "Linting R code"
Rscript ${BUILD_DIRECTORY}/.ci/lint_r_code.R ${BUILD_DIRECTORY} || exit -1
echo "Linting C++ code"
cpplint --filter=-build/c++11,-build/include_subdir,-build/header_guard,-whitespace/line_length --recursive ./src ./include ./R-package ./swig || exit -1
exit 0
fi
if [[ $TASK == "if-else" ]]; then
conda install -q -y -n $CONDA_ENV numpy
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build && cmake .. && make lightgbm -j4 || exit -1
cd $BUILD_DIRECTORY/tests/cpp_test && ../../lightgbm config=train.conf convert_model_language=cpp convert_model=../../src/boosting/gbdt_prediction.cpp && ../../lightgbm config=predict.conf output_result=origin.pred || exit -1
cd $BUILD_DIRECTORY/build && make lightgbm -j4 || exit -1
cd $BUILD_DIRECTORY/tests/cpp_test && ../../lightgbm config=predict.conf output_result=ifelse.pred && python test.py || exit -1
exit 0
fi
if [[ $TASK == "swig" ]]; then
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build
if [[ $OS_NAME == "macos" ]]; then
cmake -DUSE_SWIG=ON -DAPPLE_OUTPUT_DYLIB=ON ..
else
cmake -DUSE_SWIG=ON ..
fi
make -j4 || exit -1
if [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "gcc" ]]; then
objdump -T $BUILD_DIRECTORY/lib_lightgbm.so > $BUILD_DIRECTORY/objdump.log || exit -1
objdump -T $BUILD_DIRECTORY/lib_lightgbm_swig.so >> $BUILD_DIRECTORY/objdump.log || exit -1
python $BUILD_DIRECTORY/helpers/check_dynamic_dependencies.py $BUILD_DIRECTORY/objdump.log || exit -1
fi
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp $BUILD_DIRECTORY/build/lightgbmlib.jar $BUILD_ARTIFACTSTAGINGDIRECTORY/lightgbmlib_$OS_NAME.jar
fi
exit 0
fi
conda install -q -y -n $CONDA_ENV cloudpickle dask distributed joblib matplotlib numpy pandas psutil pytest scikit-learn scipy
# graphviz must come from conda-forge to avoid this on some linux distros:
# https://github.com/conda-forge/graphviz-feedstock/issues/18
conda install -q -y \
-n $CONDA_ENV \
-c conda-forge \
python-graphviz
if [[ $OS_NAME == "macos" ]] && [[ $COMPILER == "clang" ]]; then
# fix "OMP: Error #15: Initializing libiomp5.dylib, but found libomp.dylib already initialized." (OpenMP library conflict due to conda's MKL)
for LIBOMP_ALIAS in libgomp.dylib libiomp5.dylib libomp.dylib; do sudo ln -sf "$(brew --cellar libomp)"/*/lib/libomp.dylib $CONDA_PREFIX/lib/$LIBOMP_ALIAS || exit -1; done
fi
if [[ $TASK == "sdist" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v || exit -1
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz $BUILD_ARTIFACTSTAGINGDIRECTORY
fi
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $TASK == "bdist" ]]; then
if [[ $OS_NAME == "macos" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --plat-name=macosx --python-tag py3 || exit -1
mv dist/lightgbm-$LGB_VER-py3-none-macosx.whl dist/lightgbm-$LGB_VER-py3-none-macosx_10_14_x86_64.macosx_10_15_x86_64.macosx_11_0_x86_64.whl
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp dist/lightgbm-$LGB_VER-py3-none-macosx*.whl $BUILD_ARTIFACTSTAGINGDIRECTORY
fi
else
ARCH=$(uname -m)
if [[ $ARCH == "x86_64" ]]; then
PLATFORM="manylinux1_x86_64"
else
PLATFORM="manylinux2014_$ARCH"
fi
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --plat-name=$PLATFORM --python-tag py3 || exit -1
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
cp dist/lightgbm-$LGB_VER-py3-none-$PLATFORM.whl $BUILD_ARTIFACTSTAGINGDIRECTORY
fi
fi
pip install --user $BUILD_DIRECTORY/python-package/dist/*.whl || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
fi
mkdir $BUILD_DIRECTORY/build && cd $BUILD_DIRECTORY/build
if [[ $TASK == "gpu" ]]; then
sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "gpu";/' $BUILD_DIRECTORY/include/LightGBM/config.h
grep -q 'std::string device_type = "gpu"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit -1 # make sure that changes were really done
if [[ $METHOD == "pip" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--gpu --install-option="--opencl-include-dir=$AMDAPPSDK_PATH/include/" || exit -1
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $METHOD == "wheel" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --gpu --opencl-include-dir="$AMDAPPSDK_PATH/include/" || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER*.whl -v || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
elif [[ $METHOD == "source" ]]; then
cmake -DUSE_GPU=ON -DOpenCL_INCLUDE_DIR=$AMDAPPSDK_PATH/include/ ..
fi
elif [[ $TASK == "cuda" ]]; then
sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "cuda";/' $BUILD_DIRECTORY/include/LightGBM/config.h
grep -q 'std::string device_type = "cuda"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit -1 # make sure that changes were really done
if [[ $METHOD == "pip" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--cuda || exit -1
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $METHOD == "wheel" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --cuda || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER*.whl -v || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
elif [[ $METHOD == "source" ]]; then
cmake -DUSE_CUDA=ON ..
fi
elif [[ $TASK == "mpi" ]]; then
if [[ $METHOD == "pip" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py sdist || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER.tar.gz -v --install-option=--mpi || exit -1
pytest $BUILD_DIRECTORY/tests/python_package_test || exit -1
exit 0
elif [[ $METHOD == "wheel" ]]; then
cd $BUILD_DIRECTORY/python-package && python setup.py bdist_wheel --mpi || exit -1
pip install --user $BUILD_DIRECTORY/python-package/dist/lightgbm-$LGB_VER*.whl -v || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
exit 0
elif [[ $METHOD == "source" ]]; then
cmake -DUSE_MPI=ON -DUSE_DEBUG=ON ..
fi
else
cmake ..
fi
make _lightgbm -j4 || exit -1
cd $BUILD_DIRECTORY/python-package && python setup.py install --precompile --user || exit -1
pytest $BUILD_DIRECTORY/tests || exit -1
if [[ $TASK == "regular" ]]; then
if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
if [[ $OS_NAME == "macos" ]]; then
cp $BUILD_DIRECTORY/lib_lightgbm.so $BUILD_ARTIFACTSTAGINGDIRECTORY/lib_lightgbm.dylib
else
if [[ $COMPILER == "gcc" ]]; then
objdump -T $BUILD_DIRECTORY/lib_lightgbm.so > $BUILD_DIRECTORY/objdump.log || exit -1
python $BUILD_DIRECTORY/helpers/check_dynamic_dependencies.py $BUILD_DIRECTORY/objdump.log || exit -1
fi
cp $BUILD_DIRECTORY/lib_lightgbm.so $BUILD_ARTIFACTSTAGINGDIRECTORY/lib_lightgbm.so
fi
fi
cd $BUILD_DIRECTORY/examples/python-guide
sed -i'.bak' '/import lightgbm as lgb/a\
import matplotlib\
matplotlib.use\(\"Agg\"\)\
' plot_example.py # prevent interactive window mode
sed -i'.bak' 's/graph.render(view=True)/graph.render(view=False)/' plot_example.py
for f in *.py **/*.py; do python $f || exit -1; done # run all examples
cd $BUILD_DIRECTORY/examples/python-guide/notebooks
conda install -q -y -n $CONDA_ENV ipywidgets notebook
jupyter nbconvert --ExecutePreprocessor.timeout=180 --to notebook --execute --inplace *.ipynb || exit -1 # run all notebooks
fi