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README.txt
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README.txt
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MCMC toolbox for Matlab
=======================
The MCMCSTAT package contains a set of Matlab functions for some
Bayesian analyses of mathematical models by Markov chain Monte Carlo
simulation. This code might be useful to you if you are already
familiar with Matlab and want to do MCMC analysis using it.
This toolbox provides tools to generate and analyse
Metropolis-Hastings MCMC chains using multivariate Gaussian proposal
distribution. The covariance matrix of the proposal distribution can
be adapted during the simulation according to adaptive schemes
described in the references.
H. Haario, M. Laine, A. Mira and E. Saksman, 2006. /DRAM: Efficient
adaptive MCMC/, Statistics and Computing *16*, pp. 339-354. [doi:
10.1007/s11222-006-9438-0]
H. Haario, E. Saksman and J. Tamminen, 2001. /An adaptive Metropolis
algorithm/ Bernoulli *7*, pp. 223-242. [doi: 10.2307/3318737]
See [https://mjlaine.github.io/mcmcstat/] for some more details.
marko.laine@fmi.fi
[doi: 10.1007/s11222-006-9438-0]
http://dx.doi.org/10.1007/s11222-006-9438-0
[doi: 10.2307/3318737] http://dx.doi.org/10.2307/3318737