diff --git a/.github/workflows/buid_and_release.yml b/.github/workflows/buid_and_release.yml index 747c4d1..c2a4638 100644 --- a/.github/workflows/buid_and_release.yml +++ b/.github/workflows/buid_and_release.yml @@ -40,4 +40,4 @@ jobs: files: | omim.owl omim.sssom.tsv - mondo_genes.csv + mondo_genes.robot.tsv diff --git a/.gitignore b/.gitignore index 00a176d..ae2ebb0 100644 --- a/.gitignore +++ b/.gitignore @@ -34,4 +34,4 @@ omim.json mondo_exactmatch_omim.sssom.tsv mondo_exactmatch_omimps.sssom.tsv omim.owl -mondo_genes.csv +mondo_genes.robot.tsv diff --git a/makefile b/makefile index 11f3af7..9c12913 100644 --- a/makefile +++ b/makefile @@ -2,7 +2,7 @@ # MAIN COMMANDS / GOALS ------------------------------------------------------------------------------------------------ -all: omim.ttl omim.sssom.tsv omim.owl mondo_genes.csv +all: omim.ttl omim.sssom.tsv omim.owl mondo_genes.robot.tsv # build: Create new omim.ttl omim.ttl: @@ -35,7 +35,7 @@ omim.owl: omim.ttl mondo_exactmatch_omim.sssom.owl mondo_exactmatch_omimps.sssom query --update sparql/hgnc_links.ru \ convert -f ofn -o $@ -mondo_genes.csv: omim.owl +mondo_genes.robot.tsv: omim.owl robot query -i omim.owl --query sparql/mondo_genes.sparql $@ cleanup: