diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml index c0b82a2c8..f16612954 100644 --- a/.github/workflows/ci.yaml +++ b/.github/workflows/ci.yaml @@ -95,9 +95,7 @@ jobs: pathogen: ncov, build-args: all_regions -j 2 --profile nextstrain_profiles/nextstrain-ci, } - # Disable rsv CI until Nextclade v3 is available on Conda. - # See issue https://github.com/nextstrain/private/issues/97 - # - { pathogen: rsv } + - { pathogen: rsv } - { pathogen: seasonal-flu, build-args: --configfile profiles/ci/builds.yaml -p, @@ -113,6 +111,10 @@ jobs: with: path: ./augur + - name: Set cache key + id: cache-key + run: echo "DATE=$(date +'%Y-%m-%d')" >> "$GITHUB_ENV" + - uses: mamba-org/setup-micromamba@v1 with: create-args: nextstrain-base @@ -123,6 +125,7 @@ jobs: - bioconda channel_priority: strict cache-environment: true + cache-environment-key: ${{ env.DATE }} environment-name: augur - run: pip install ./augur