From 71bc345ae6bf34c47d147753e3a22f3d460d1c21 Mon Sep 17 00:00:00 2001 From: Florian De Temmerman Date: Fri, 13 Dec 2024 15:22:16 +0100 Subject: [PATCH] Update conda pixelator version --- modules/local/pixelator/collect_metadata.nf | 2 +- modules/local/pixelator/list_options.nf | 2 +- modules/local/pixelator/single-cell/amplicon/main.nf | 2 +- modules/local/pixelator/single-cell/analysis/main.nf | 2 +- modules/local/pixelator/single-cell/annotate/main.nf | 2 +- modules/local/pixelator/single-cell/collapse/main.nf | 2 +- modules/local/pixelator/single-cell/demux/main.nf | 2 +- modules/local/pixelator/single-cell/graph/main.nf | 2 +- modules/local/pixelator/single-cell/layout/main.nf | 2 +- modules/local/pixelator/single-cell/qc/main.nf | 2 +- modules/local/pixelator/single-cell/report/main.nf | 2 +- 11 files changed, 11 insertions(+), 11 deletions(-) diff --git a/modules/local/pixelator/collect_metadata.nf b/modules/local/pixelator/collect_metadata.nf index c119cd2..9d74975 100644 --- a/modules/local/pixelator/collect_metadata.nf +++ b/modules/local/pixelator/collect_metadata.nf @@ -3,7 +3,7 @@ process PIXELATOR_COLLECT_METADATA { label 'process_single' cache false - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/list_options.nf b/modules/local/pixelator/list_options.nf index 17fa8b2..e7b65e8 100644 --- a/modules/local/pixelator/list_options.nf +++ b/modules/local/pixelator/list_options.nf @@ -2,7 +2,7 @@ process PIXELATOR_LIST_OPTIONS { label 'process_single' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/amplicon/main.nf b/modules/local/pixelator/single-cell/amplicon/main.nf index 3bdca1e..533db43 100644 --- a/modules/local/pixelator/single-cell/amplicon/main.nf +++ b/modules/local/pixelator/single-cell/amplicon/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_AMPLICON { label 'process_low' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/analysis/main.nf b/modules/local/pixelator/single-cell/analysis/main.nf index 9320c85..ec97b80 100644 --- a/modules/local/pixelator/single-cell/analysis/main.nf +++ b/modules/local/pixelator/single-cell/analysis/main.nf @@ -2,7 +2,7 @@ process PIXELATOR_ANALYSIS { tag "$meta.id" label 'process_medium' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/annotate/main.nf b/modules/local/pixelator/single-cell/annotate/main.nf index 7164fd3..87042d3 100644 --- a/modules/local/pixelator/single-cell/annotate/main.nf +++ b/modules/local/pixelator/single-cell/annotate/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_ANNOTATE { label 'process_high' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/collapse/main.nf b/modules/local/pixelator/single-cell/collapse/main.nf index 6ac9598..ef4fcef 100644 --- a/modules/local/pixelator/single-cell/collapse/main.nf +++ b/modules/local/pixelator/single-cell/collapse/main.nf @@ -2,7 +2,7 @@ process PIXELATOR_COLLAPSE { tag "$meta.id" label 'process_medium' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/demux/main.nf b/modules/local/pixelator/single-cell/demux/main.nf index a4c8f86..0c3138e 100644 --- a/modules/local/pixelator/single-cell/demux/main.nf +++ b/modules/local/pixelator/single-cell/demux/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_DEMUX { label 'process_medium' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/graph/main.nf b/modules/local/pixelator/single-cell/graph/main.nf index 1b40543..132deb2 100644 --- a/modules/local/pixelator/single-cell/graph/main.nf +++ b/modules/local/pixelator/single-cell/graph/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_GRAPH { label 'process_high' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/layout/main.nf b/modules/local/pixelator/single-cell/layout/main.nf index 6b91913..9e8de55 100644 --- a/modules/local/pixelator/single-cell/layout/main.nf +++ b/modules/local/pixelator/single-cell/layout/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_LAYOUT { label 'process_medium' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/qc/main.nf b/modules/local/pixelator/single-cell/qc/main.nf index 68d3d45..a5878e7 100644 --- a/modules/local/pixelator/single-cell/qc/main.nf +++ b/modules/local/pixelator/single-cell/qc/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_QC { label 'process_medium' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }" diff --git a/modules/local/pixelator/single-cell/report/main.nf b/modules/local/pixelator/single-cell/report/main.nf index 517a0bb..900e4b2 100644 --- a/modules/local/pixelator/single-cell/report/main.nf +++ b/modules/local/pixelator/single-cell/report/main.nf @@ -3,7 +3,7 @@ process PIXELATOR_REPORT { label 'process_low' - conda "bioconda::pixelator=0.18.2" + conda "bioconda::pixelator=0.19.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/pixelator:pixelator:0.19.0--pyhdfd78af_0' : 'biocontainers/pixelator:0.19.0--pyhdfd78af_0' }"