diff --git a/.cache.tar.xz b/.cache.tar.xz index bd4d1a5c09..665221785a 100644 Binary files a/.cache.tar.xz and b/.cache.tar.xz differ diff --git a/public/components.json b/public/components.json index 28890912bc..8fc545a455 100644 --- a/public/components.json +++ b/public/components.json @@ -7664,6 +7664,10 @@ "name": "rnafusion", "version": "3.0.2" }, + { + "name": "rnafusion", + "version": "3.0.2" + }, { "name": "rnafusion", "version": "3.0.2" @@ -8966,7 +8970,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -25079,6 +25083,14 @@ "name": "genomeassembler", "version": "dev" }, + { + "name": "pathogensurveillance", + "version": "dev" + }, + { + "name": "genomeassembler", + "version": "dev" + }, { "name": "pathogensurveillance", "version": "dev" @@ -74875,7 +74887,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -96871,7 +96883,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -96992,7 +97004,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -97080,7 +97092,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -97395,7 +97407,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -97585,7 +97597,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -97701,7 +97713,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -106804,6 +106816,10 @@ "name": "genomeassembler", "version": "dev" }, + { + "name": "genomeassembler", + "version": "dev" + }, { "name": "genomeassembler", "version": "dev" @@ -116136,7 +116152,7 @@ }, { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" }, { "name": "pangenome", @@ -158034,7 +158050,7 @@ "pipelines": [ { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" } ] }, @@ -197314,7 +197330,7 @@ }, { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" }, { "name": "pangenome", @@ -197575,7 +197591,7 @@ }, { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" }, { "name": "pangenome", @@ -197919,7 +197935,7 @@ }, { "name": "pairgenomealign", - "version": "1.0.0" + "version": "1.1.0" }, { "name": "pangenome", diff --git a/public/pipelines.json b/public/pipelines.json index 3e6942760c..a387df70f0 100644 --- a/public/pipelines.json +++ b/public/pipelines.json @@ -73,7 +73,7 @@ } }, "network_count": 34, - "subscribers_count": 144, + "subscribers_count": 143, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -591,7 +591,7 @@ } }, "network_count": 115, - "subscribers_count": 145, + "subscribers_count": 144, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -1500,7 +1500,7 @@ } }, "network_count": 116, - "subscribers_count": 144, + "subscribers_count": 143, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -2088,7 +2088,7 @@ } }, "network_count": 41, - "subscribers_count": 144, + "subscribers_count": 143, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -2544,7 +2544,7 @@ } }, "network_count": 30, - "subscribers_count": 137, + "subscribers_count": 136, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -2796,7 +2796,7 @@ } }, "network_count": 13, - "subscribers_count": 151, + "subscribers_count": 150, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -3151,7 +3151,7 @@ } }, "network_count": 12, - "subscribers_count": 140, + "subscribers_count": 139, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -3422,7 +3422,7 @@ } }, "network_count": 3, - "subscribers_count": 147, + "subscribers_count": 146, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -3693,7 +3693,7 @@ } }, "network_count": 145, - "subscribers_count": 142, + "subscribers_count": 141, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -4171,7 +4171,7 @@ } }, "network_count": 14, - "subscribers_count": 150, + "subscribers_count": 149, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -4555,9 +4555,9 @@ "url": "https://api.github.com/repos/nf-core/circrna", "created_at": "2021-02-10T14:28:49Z", "updated_at": "2024-09-26T13:31:31Z", - "pushed_at": "2024-10-09T12:09:33Z", + "pushed_at": "2024-10-09T16:45:42Z", "homepage": "https://nf-co.re/circrna", - "size": 73595, + "size": 73598, "stargazers_count": 44, "watchers_count": 44, "language": "Nextflow", @@ -4621,7 +4621,7 @@ } }, "network_count": 21, - "subscribers_count": 105, + "subscribers_count": 104, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -4899,7 +4899,7 @@ } }, "network_count": 27, - "subscribers_count": 109, + "subscribers_count": 108, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -5122,7 +5122,7 @@ } }, "network_count": 2, - "subscribers_count": 71, + "subscribers_count": 70, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -5360,7 +5360,7 @@ } }, "network_count": 7, - "subscribers_count": 153, + "subscribers_count": 152, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -5507,9 +5507,9 @@ "url": "https://api.github.com/repos/nf-core/createtaxdb", "created_at": "2023-10-24T08:41:35Z", "updated_at": "2024-10-09T09:11:02Z", - "pushed_at": "2024-10-09T11:05:15Z", + "pushed_at": "2024-10-09T18:26:22Z", "homepage": "https://nf-co.re/createtaxdb", - "size": 3104, + "size": 3130, "stargazers_count": 7, "watchers_count": 7, "language": "Nextflow", @@ -5570,7 +5570,7 @@ } }, "network_count": 3, - "subscribers_count": 162, + "subscribers_count": 161, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -5781,7 +5781,7 @@ } }, "network_count": 25, - "subscribers_count": 139, + "subscribers_count": 138, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -6211,7 +6211,7 @@ } }, "network_count": 5, - "subscribers_count": 139, + "subscribers_count": 138, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -6409,7 +6409,7 @@ } }, "network_count": 46, - "subscribers_count": 151, + "subscribers_count": 150, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -7014,7 +7014,7 @@ } }, "network_count": 3, - "subscribers_count": 193, + "subscribers_count": 191, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -8058,7 +8058,7 @@ } }, "network_count": 6, - "subscribers_count": 187, + "subscribers_count": 186, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -8246,7 +8246,7 @@ } }, "network_count": 36, - "subscribers_count": 89, + "subscribers_count": 88, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -9261,7 +9261,7 @@ } }, "network_count": 2, - "subscribers_count": 185, + "subscribers_count": 184, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -9506,7 +9506,7 @@ } }, "network_count": 4, - "subscribers_count": 163, + "subscribers_count": 162, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -9724,7 +9724,7 @@ } }, "network_count": 12, - "subscribers_count": 69, + "subscribers_count": 68, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -9981,9 +9981,9 @@ "url": "https://api.github.com/repos/nf-core/differentialabundance", "created_at": "2022-10-12T08:49:25Z", "updated_at": "2024-09-25T10:45:18Z", - "pushed_at": "2024-10-09T11:05:53Z", + "pushed_at": "2024-10-09T22:31:42Z", "homepage": "https://nf-co.re/differentialabundance", - "size": 8484, + "size": 8487, "stargazers_count": 57, "watchers_count": 57, "language": "Nextflow", @@ -10048,7 +10048,7 @@ } }, "network_count": 33, - "subscribers_count": 143, + "subscribers_count": 142, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -10587,7 +10587,7 @@ } }, "network_count": 0, - "subscribers_count": 223, + "subscribers_count": 220, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -10748,7 +10748,7 @@ } }, "network_count": 30, - "subscribers_count": 111, + "subscribers_count": 110, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -10977,7 +10977,7 @@ } }, "network_count": 81, - "subscribers_count": 153, + "subscribers_count": 152, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -11671,7 +11671,7 @@ } }, "network_count": 22, - "subscribers_count": 135, + "subscribers_count": 134, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -12019,7 +12019,7 @@ } }, "network_count": 28, - "subscribers_count": 174, + "subscribers_count": 173, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -12178,7 +12178,7 @@ } }, "network_count": 9, - "subscribers_count": 152, + "subscribers_count": 151, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -12425,7 +12425,7 @@ } }, "network_count": 72, - "subscribers_count": 93, + "subscribers_count": 92, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -12955,7 +12955,7 @@ } }, "network_count": 20, - "subscribers_count": 91, + "subscribers_count": 90, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -13848,7 +13848,7 @@ } }, "network_count": 12, - "subscribers_count": 156, + "subscribers_count": 155, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -14040,7 +14040,7 @@ } }, "network_count": 11, - "subscribers_count": 159, + "subscribers_count": 158, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -14260,7 +14260,7 @@ } }, "network_count": 3, - "subscribers_count": 159, + "subscribers_count": 158, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -14408,7 +14408,7 @@ } }, "network_count": 17, - "subscribers_count": 156, + "subscribers_count": 155, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -14642,7 +14642,7 @@ } }, "network_count": 5, - "subscribers_count": 151, + "subscribers_count": 150, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -14928,7 +14928,7 @@ } }, "network_count": 54, - "subscribers_count": 133, + "subscribers_count": 132, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -15288,7 +15288,7 @@ } }, "network_count": 5, - "subscribers_count": 84, + "subscribers_count": 83, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -15601,7 +15601,7 @@ } }, "network_count": 30, - "subscribers_count": 150, + "subscribers_count": 149, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -15946,7 +15946,7 @@ } }, "network_count": 17, - "subscribers_count": 132, + "subscribers_count": 131, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -16155,7 +16155,7 @@ } }, "network_count": 13, - "subscribers_count": 79, + "subscribers_count": 78, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -16573,7 +16573,7 @@ } }, "network_count": 11, - "subscribers_count": 141, + "subscribers_count": 140, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -17647,7 +17647,7 @@ } }, "network_count": 107, - "subscribers_count": 154, + "subscribers_count": 153, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -19079,7 +19079,7 @@ } }, "network_count": 4, - "subscribers_count": 175, + "subscribers_count": 174, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -19252,7 +19252,7 @@ } }, "network_count": 3, - "subscribers_count": 157, + "subscribers_count": 156, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -19585,7 +19585,7 @@ } }, "network_count": 15, - "subscribers_count": 147, + "subscribers_count": 146, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -19790,7 +19790,7 @@ } }, "network_count": 2, - "subscribers_count": 196, + "subscribers_count": 195, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -19954,7 +19954,7 @@ } }, "network_count": 14, - "subscribers_count": 33, + "subscribers_count": 32, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -20213,7 +20213,7 @@ } }, "network_count": 5, - "subscribers_count": 59, + "subscribers_count": 58, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -20510,7 +20510,7 @@ } }, "network_count": 10, - "subscribers_count": 145, + "subscribers_count": 144, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -20808,7 +20808,7 @@ } }, "network_count": 0, - "subscribers_count": 216, + "subscribers_count": 214, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -20966,7 +20966,7 @@ } }, "network_count": 143, - "subscribers_count": 144, + "subscribers_count": 143, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -21634,7 +21634,7 @@ } }, "network_count": 25, - "subscribers_count": 81, + "subscribers_count": 80, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -22175,7 +22175,7 @@ } }, "network_count": 9, - "subscribers_count": 135, + "subscribers_count": 134, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -22382,7 +22382,7 @@ } }, "network_count": 7, - "subscribers_count": 147, + "subscribers_count": 146, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -22580,7 +22580,7 @@ } }, "network_count": 11, - "subscribers_count": 143, + "subscribers_count": 142, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -22870,7 +22870,7 @@ } }, "network_count": 80, - "subscribers_count": 132, + "subscribers_count": 131, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -23272,7 +23272,7 @@ } }, "network_count": 6, - "subscribers_count": 153, + "subscribers_count": 152, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -23505,9 +23505,9 @@ "url": "https://api.github.com/repos/nf-core/nascent", "created_at": "2018-11-15T15:46:09Z", "updated_at": "2024-09-06T05:39:17Z", - "pushed_at": "2024-10-09T11:06:49Z", + "pushed_at": "2024-10-09T22:42:18Z", "homepage": "https://nf-co.re/nascent", - "size": 8627, + "size": 8632, "stargazers_count": 18, "watchers_count": 18, "language": "Nextflow", @@ -23568,7 +23568,7 @@ } }, "network_count": 10, - "subscribers_count": 150, + "subscribers_count": 149, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -24092,7 +24092,7 @@ } }, "network_count": 7, - "subscribers_count": 173, + "subscribers_count": 172, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -24300,7 +24300,7 @@ } }, "network_count": 4, - "subscribers_count": 188, + "subscribers_count": 187, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -24406,9 +24406,9 @@ "url": "https://api.github.com/repos/nf-core/oncoanalyser", "created_at": "2022-12-22T05:01:49Z", "updated_at": "2024-09-15T18:34:09Z", - "pushed_at": "2024-10-09T11:08:39Z", + "pushed_at": "2024-10-10T01:21:50Z", "homepage": "https://nf-co.re/oncoanalyser", - "size": 5100, + "size": 5103, "stargazers_count": 40, "watchers_count": 40, "language": "Nextflow", @@ -24462,7 +24462,7 @@ } }, "network_count": 7, - "subscribers_count": 165, + "subscribers_count": 164, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -24627,7 +24627,7 @@ "url": "https://api.github.com/repos/nf-core/pairgenomealign", "created_at": "2024-05-24T01:40:57Z", "updated_at": "2024-10-09T07:32:26Z", - "pushed_at": "2024-10-09T11:08:12Z", + "pushed_at": "2024-10-10T01:06:28Z", "homepage": "https://nf-co.re/pairgenomealign", "size": 1797, "stargazers_count": 6, @@ -24691,7 +24691,7 @@ } }, "network_count": 2, - "subscribers_count": 182, + "subscribers_count": 181, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -24769,10 +24769,10 @@ "avatar_url": "https://avatars.githubusercontent.com/u/143203715?v=4" } ], - "released_after_tools": false, + "released_after_tools": true, "head_sha": "5df2dfe43a1bd35fefc927509b31c1ac1bb3a25f", "last_release_is_head": false, - "last_release_vs_default_compare_url": "https://github.com/nf-core/pairgenomealign/compare/5df2dfe43a1bd35fefc927509b31c1ac1bb3a25f...c493be3ba884299576f4f91c2064b1aa8c7aa8f6", + "last_release_vs_default_compare_url": "https://github.com/nf-core/pairgenomealign/compare/5df2dfe43a1bd35fefc927509b31c1ac1bb3a25f...65e829836a2510ac3fcc5e5a75e9f91ff7604512", "commits_to_dev": 30, "is_DSL2": true, "has_nf_test": false, @@ -24784,6 +24784,35 @@ "nf-validation@1.1.3" ], "releases": [ + { + "tag_name": "1.1.0", + "published_at": "2024-10-10T01:07:14Z", + "tag_sha": "65e829836a2510ac3fcc5e5a75e9f91ff7604512", + "has_schema": true, + "doc_files": [ + "docs/output.md", + "docs/usage.md" + ], + "components": { + "modules": [ + "assemblyscan", + "gfastats", + "last_dotplot", + "last_lastal", + "last_lastdb", + "last_mafswap", + "last_split", + "last_train", + "multiqc", + "seqtk_cutn" + ], + "subworkflows": [ + "utils_nextflow_pipeline", + "utils_nfcore_pipeline", + "utils_nfvalidation_plugin" + ] + } + }, { "tag_name": "1.0.0", "published_at": "2024-08-27T23:41:16Z", @@ -24913,7 +24942,7 @@ } }, "network_count": 16, - "subscribers_count": 53, + "subscribers_count": 52, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -25291,7 +25320,7 @@ } }, "network_count": 5, - "subscribers_count": 169, + "subscribers_count": 168, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -25975,7 +26004,7 @@ } }, "network_count": 7, - "subscribers_count": 147, + "subscribers_count": 146, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -26152,14 +26181,14 @@ "forks_count": 13, "archived": false, "disabled": false, - "open_issues_count": 15, + "open_issues_count": 16, "allow_forking": true, "is_template": false, "web_commit_signoff_required": false, "topics": [], "visibility": "public", "forks": 13, - "open_issues": 15, + "open_issues": 16, "watchers": 16, "default_branch": "dev", "temp_clone_token": "", @@ -26193,7 +26222,7 @@ } }, "network_count": 13, - "subscribers_count": 158, + "subscribers_count": 157, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -26222,7 +26251,7 @@ "TEMPLATE_branch_protection_enforce_admins": -1, "TEMPLATE_restrict_push": true, "has_required_topics": false, - "open_pr_count": 3, + "open_pr_count": 4, "repository_url": "https://github.com/nf-core/phaseimpute", "contributors": [ { @@ -26401,7 +26430,7 @@ } }, "network_count": 3, - "subscribers_count": 155, + "subscribers_count": 154, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -26628,7 +26657,7 @@ } }, "network_count": 3, - "subscribers_count": 147, + "subscribers_count": 146, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -26966,7 +26995,7 @@ } }, "network_count": 36, - "subscribers_count": 156, + "subscribers_count": 155, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -27284,7 +27313,7 @@ } }, "network_count": 19, - "subscribers_count": 136, + "subscribers_count": 135, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -28052,7 +28081,7 @@ } }, "network_count": 4, - "subscribers_count": 155, + "subscribers_count": 154, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -28249,7 +28278,7 @@ } }, "network_count": 3, - "subscribers_count": 170, + "subscribers_count": 169, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -28426,7 +28455,7 @@ } }, "network_count": 34, - "subscribers_count": 150, + "subscribers_count": 149, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -29591,7 +29620,7 @@ } }, "network_count": 6, - "subscribers_count": 162, + "subscribers_count": 161, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -29776,9 +29805,9 @@ "url": "https://api.github.com/repos/nf-core/reportho", "created_at": "2024-02-26T10:23:32Z", "updated_at": "2024-09-18T22:31:54Z", - "pushed_at": "2024-07-18T12:48:38Z", + "pushed_at": "2024-10-09T14:16:58Z", "homepage": "", - "size": 1516, + "size": 2123, "stargazers_count": 6, "watchers_count": 6, "language": "Nextflow", @@ -29832,7 +29861,7 @@ } }, "network_count": 4, - "subscribers_count": 164, + "subscribers_count": 163, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -29958,8 +29987,8 @@ }, { "tag_name": "dev", - "published_at": "2024-06-11T13:26:35Z", - "tag_sha": "5cac51767527dc01eebdea0b8c7f999f65646e19", + "published_at": "2024-10-09T14:12:54Z", + "tag_sha": "d89327ed0273ec177f9a48c5f48d5a570457c311", "has_schema": true, "doc_files": [ "docs/output.md", @@ -30050,7 +30079,7 @@ } }, "network_count": 4, - "subscribers_count": 154, + "subscribers_count": 153, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -30422,7 +30451,7 @@ } }, "network_count": 6, - "subscribers_count": 151, + "subscribers_count": 150, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -30629,9 +30658,9 @@ "url": "https://api.github.com/repos/nf-core/rnafusion", "created_at": "2018-10-05T13:05:57Z", "updated_at": "2024-09-04T04:34:53Z", - "pushed_at": "2024-10-09T13:43:16Z", + "pushed_at": "2024-10-09T14:59:54Z", "homepage": "https://nf-co.re/rnafusion", - "size": 19662, + "size": 19670, "stargazers_count": 138, "watchers_count": 138, "language": "Nextflow", @@ -30691,7 +30720,7 @@ } }, "network_count": 93, - "subscribers_count": 144, + "subscribers_count": 143, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -31375,12 +31404,12 @@ "fork": false, "url": "https://api.github.com/repos/nf-core/rnaseq", "created_at": "2018-03-29T13:10:58Z", - "updated_at": "2024-10-07T16:24:30Z", - "pushed_at": "2024-10-09T14:04:40Z", + "updated_at": "2024-10-09T22:00:13Z", + "pushed_at": "2024-10-09T18:14:17Z", "homepage": "https://nf-co.re/rnaseq", - "size": 71946, - "stargazers_count": 880, - "watchers_count": 880, + "size": 72019, + "stargazers_count": 881, + "watchers_count": 881, "language": "Nextflow", "has_issues": true, "has_projects": false, @@ -31391,7 +31420,7 @@ "forks_count": 701, "archived": false, "disabled": false, - "open_issues_count": 68, + "open_issues_count": 69, "allow_forking": true, "is_template": false, "web_commit_signoff_required": false, @@ -31401,8 +31430,8 @@ ], "visibility": "public", "forks": 701, - "open_issues": 68, - "watchers": 880, + "open_issues": 69, + "watchers": 881, "default_branch": "master", "temp_clone_token": "", "allow_squash_merge": false, @@ -31437,7 +31466,7 @@ } }, "network_count": 701, - "subscribers_count": 151, + "subscribers_count": 150, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -33577,7 +33606,7 @@ } }, "network_count": 24, - "subscribers_count": 145, + "subscribers_count": 144, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -34053,7 +34082,7 @@ } }, "network_count": 32, - "subscribers_count": 104, + "subscribers_count": 103, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -34358,7 +34387,7 @@ } }, "network_count": 3, - "subscribers_count": 156, + "subscribers_count": 155, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -34511,9 +34540,9 @@ "url": "https://api.github.com/repos/nf-core/sarek", "created_at": "2019-04-30T15:43:00Z", "updated_at": "2024-10-08T18:02:02Z", - "pushed_at": "2024-10-09T14:02:19Z", + "pushed_at": "2024-10-09T16:04:12Z", "homepage": "https://nf-co.re/sarek", - "size": 92150, + "size": 92154, "stargazers_count": 397, "watchers_count": 397, "language": "Nextflow", @@ -34526,7 +34555,7 @@ "forks_count": 404, "archived": false, "disabled": false, - "open_issues_count": 279, + "open_issues_count": 280, "allow_forking": true, "is_template": false, "web_commit_signoff_required": false, @@ -34545,7 +34574,7 @@ ], "visibility": "public", "forks": 404, - "open_issues": 279, + "open_issues": 280, "watchers": 397, "default_branch": "master", "temp_clone_token": "", @@ -34581,7 +34610,7 @@ } }, "network_count": 404, - "subscribers_count": 128, + "subscribers_count": 127, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -37102,7 +37131,7 @@ } }, "network_count": 7, - "subscribers_count": 174, + "subscribers_count": 173, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -37638,12 +37667,12 @@ "fork": false, "url": "https://api.github.com/repos/nf-core/scnanoseq", "created_at": "2022-04-08T15:41:14Z", - "updated_at": "2024-10-08T01:43:12Z", + "updated_at": "2024-10-09T16:50:19Z", "pushed_at": "2024-10-09T11:07:35Z", "homepage": "https://nf-co.re/scnanoseq/", "size": 23332, - "stargazers_count": 15, - "watchers_count": 15, + "stargazers_count": 16, + "watchers_count": 16, "language": "Nextflow", "has_issues": true, "has_projects": true, @@ -37668,7 +37697,7 @@ "visibility": "public", "forks": 4, "open_issues": 2, - "watchers": 15, + "watchers": 16, "default_branch": "master", "temp_clone_token": "", "allow_squash_merge": true, @@ -37701,7 +37730,7 @@ } }, "network_count": 4, - "subscribers_count": 17, + "subscribers_count": 16, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -37966,7 +37995,7 @@ } }, "network_count": 167, - "subscribers_count": 128, + "subscribers_count": 127, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -38782,7 +38811,7 @@ } }, "network_count": 14, - "subscribers_count": 170, + "subscribers_count": 169, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -39794,7 +39823,7 @@ "forks_count": 125, "archived": false, "disabled": false, - "open_issues_count": 17, + "open_issues_count": 16, "allow_forking": true, "is_template": false, "web_commit_signoff_required": false, @@ -39804,7 +39833,7 @@ ], "visibility": "public", "forks": 125, - "open_issues": 17, + "open_issues": 16, "watchers": 73, "default_branch": "master", "temp_clone_token": "", @@ -39838,7 +39867,7 @@ } }, "network_count": 125, - "subscribers_count": 141, + "subscribers_count": 140, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -39892,7 +39921,7 @@ "TEMPLATE_branch_protection_enforce_admins": -1, "TEMPLATE_restrict_push": true, "has_required_topics": true, - "open_pr_count": 4, + "open_pr_count": 3, "repository_url": "https://github.com/nf-core/smrnaseq", "contributors": [ { @@ -40477,7 +40506,7 @@ } }, "network_count": 18, - "subscribers_count": 153, + "subscribers_count": 152, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -40681,7 +40710,7 @@ } }, "network_count": 2, - "subscribers_count": 152, + "subscribers_count": 151, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -40870,7 +40899,7 @@ } }, "network_count": 4, - "subscribers_count": 101, + "subscribers_count": 100, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -41086,7 +41115,7 @@ } }, "network_count": 35, - "subscribers_count": 145, + "subscribers_count": 144, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -42374,7 +42403,7 @@ } }, "network_count": 1, - "subscribers_count": 186, + "subscribers_count": 184, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -42480,7 +42509,7 @@ "forks_count": 1, "archived": false, "disabled": false, - "open_issues_count": 4, + "open_issues_count": 5, "allow_forking": true, "is_template": false, "web_commit_signoff_required": false, @@ -42491,7 +42520,7 @@ ], "visibility": "public", "forks": 1, - "open_issues": 4, + "open_issues": 5, "watchers": 9, "default_branch": "dev", "temp_clone_token": "", @@ -42525,7 +42554,7 @@ } }, "network_count": 1, - "subscribers_count": 164, + "subscribers_count": 163, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -42888,7 +42917,7 @@ } }, "network_count": 6, - "subscribers_count": 164, + "subscribers_count": 163, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -43104,7 +43133,7 @@ } }, "network_count": 3, - "subscribers_count": 152, + "subscribers_count": 151, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -43317,7 +43346,7 @@ } }, "network_count": 12, - "subscribers_count": 184, + "subscribers_count": 183, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -43531,7 +43560,7 @@ } }, "network_count": 8, - "subscribers_count": 153, + "subscribers_count": 152, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true, @@ -43799,7 +43828,7 @@ } }, "network_count": 108, - "subscribers_count": 99, + "subscribers_count": 98, "team_contributors_permission_push": true, "team_contributors_permission_admin": false, "team_core_permission_push": true,