upgrade a few packages #3622

Job	Run time
Native packages (macOS, OCaml 4_14)	1h 19m 14s
Native (Top-level) packages (ubuntu-latest)	3m 37s
Native packages (macOS, OCaml 5_0)	1h 8m 28s
nix-fmt-check	2m 12s
Native (Top-level) packages (macos-13)	5m 26s
Native packages (Linux, OCaml 4_14)	58m 4s
Native packages (macOS, OCaml 5_1)	1h 7m 27s
Native packages (Linux, OCaml 5_0)	55m 46s
Native packages (Linux, OCaml 5_1)	55m 29s
arm64 packages (OCaml 4_14)	14m 4s
musl packages (OCaml 4_14)	7m 44s
arm64 packages (OCaml 5_0)	12m 14s
musl packages (OCaml 5_0)	8m 11s
arm64 packages (OCaml 5_1)	14m 27s
musl packages (OCaml 5_1)	8m 18s
	7h 40m 41s

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