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variability-capture-checklist.html
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---
layout: splash
title: Variability Capture Checklist
header:
overlay_image: "https://image.freepik.com/free-photo/flat-lay-notebook-with-list-desk_23-2148938735.jpg"
overlay_image: "https://img.rawpixel.com/s3fs-private/rawpixel_images/website_content/270-jira05545424-jj.jpg?w=1000&dpr=1&fit=default&crop=default&q=65&vib=3&con=3&usm=15&bg=F4F4F3&auto=format&ixlib=js-2.2.1&s=a49917fb02c73969cb6bc614438624e3"
---
<link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/clay/lib/css/atlas.css">
<script src="https://cdn.jsdelivr.net/npm/clay/lib/js/clay.js"></script>
<script src="https://code.jquery.com/jquery-3.5.1.slim.min.js" integrity="sha384-DfXdz2htPH0lsSSs5nCTpuj/zy4C+OGpamoFVy38MVBnE+IbbVYUew+OrCXaRkfj" crossorigin="anonymous"></script>
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<body style="background-color:white!important">
<div style="padding: 0vh 5vw">
<h1>Variability Capture Checklist</h1>
<hr/>
<div aria-orientation="vertical" class="panel-group" role="tablist">
<div class="panel" role="tablist">
<button
aria-controls="collapsePanelOne"
id="button1"
aria-expanded="false"
class="btn btn-unstyled panel-header panel-header-link collapse-icon collapse-icon-middle collapsed"
data-target="#collapsePanelOne"
data-toggle="collapse"
role="tab"
>
<span class="panel-title"><h4>How was variability captured in this study?</h4></span>
<span class="collapse-icon-closed">
<svg
class="lexicon-icon lexicon-icon-angle-right"
role="presentation"
>
<use xlink:href="/assets/images/icons.svg#angle-right"></use>
</svg>
</span>
<span class="collapse-icon-open">
<svg
class="lexicon-icon lexicon-icon-angle-down"
role="presentation"
>
<use xlink:href="/assets/images/icons.svg#angle-down"></use>
</svg>
</span>
</button>
<div
class="panel-collapse collapse"
id="collapsePanelOne"
role="tabpanel"
>
<div class="panel-body">
<div class="form-group">
<h4 style="display:inline">Dataset</h4>
<label style="float:right; width: 11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#dataset_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="dataset_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="What dataset was used to generate this finding?
Were other datasets used for external validation?
Was the dataset separated for the learning and validation of results?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Repeated measurements</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#repeatedmeasure_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="repeatedmeasure_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Were multiple measurements taken per sample?
Was each modality/feature evaluated multiple times?
What was the reliability of the dataset?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Phenotypic targets</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#phenotypictarg_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="phenotypictarg_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Were multiple measurements taken per sample?
Was each modality/feature evaluated multiple times?
What was the reliability of the dataset?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Modalities</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#modality_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="modality_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Were data collected using multiple measurement techniques?
Were findings compared to those generated using another modality?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Processing configurations</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#procconfig_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="procconfig_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Were multiple processing pipelines considered?
Were various sets of parameters used?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Numerical uncertainty</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#numunc_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="numunc_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Was noise added to the data?
Was noise added to the processing?
Were various infrastructures (e.g. OSes) used?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Resolution</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#resolution_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="resolution_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Was the finding evaluated across multiple spatial or temporal resolutions?
Were results using multiple expertly-defined regional boundaries compared?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Analyst (data collection)</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#analystdata_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="analystdata_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Were data collected by different individuals?
Were data collected using different apparatus?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Analyst (processing & modelling)</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#analystproc_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="analystproc_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Were tools developed by >1 individual?
Were multiple expert opinions considered?
Were results replicated across analysts?"></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Other</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Explored" data-label-on="Explored" data-toggle="collapse" href="#other1_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="other1_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder=""></textarea>
</div>
</div>
</div>
</div>
</div>
<hr/>
<!-- start grp 2 -->
<div class="panel" role="tablist">
<button
aria-controls="collapsePanelTwo"
id="button2"
aria-expanded="false"
class="btn btn-unstyled panel-header panel-header-link collapse-icon collapse-icon-middle collapsed"
data-target="#collapsePanelTwo"
data-toggle="collapse"
role="tab"
>
<span class="panel-title"><h4>How was variabilty used in the analyses?</h4></span>
<span class="collapse-icon-closed">
<svg
class="lexicon-icon lexicon-icon-angle-right"
role="presentation"
>
<use xlink:href="/assets/images/icons.svg#angle-right"></use>
</svg>
</span>
<span class="collapse-icon-open">
<svg
class="lexicon-icon lexicon-icon-angle-down"
role="presentation"
>
<use xlink:href="/assets/images/icons.svg#angle-down"></use>
</svg>
</span>
</button>
<div
class="panel-collapse collapse"
id="collapsePanelTwo"
role="tabpanel"
>
<div class="panel-body">
<div class="form-group">
<h4 style="display:inline">Stability of features/effect size</h4>
<label style="float:right;width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Used" data-label-on="Used" data-toggle="collapse" href="#effectsize_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="effectsize_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Such as measures of test-retest reliability (e.g. discriminability), the number of significant digits in results, variance in model performance, or measures of group differences."></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Repeated Measures Analysis</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Used" data-label-on="Used" data-toggle="collapse" href="#repeatedanalysis_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="repeatedanalysis_d">
<label for="basicInputTypeTextarea">Description</label>
<textarea class="form-control" rows=3 id="basicInputTypeTextarea" placeholder="Such as what may be performed to evaluate whether a statistical difference across the perturbed axes existed and had an impact on the results (e.g., RM-ANOVA, Linear Mixture Modelling)."></textarea>
</div>
</div>
<div class="form-group">
<h4 style="display:inline">Meta-analysis</h4>
<label style="float:right; width:11em" class="toggle-switch">
<input class="toggle-switch-check" type="checkbox" />
<span aria-hidden="true" class="toggle-switch-bar">
<span class="toggle-switch-handle" data-label-off="Not Used" data-label-on="Used" data-toggle="collapse" href="#metaana_d">
<span class="toggle-switch-icon toggle-switch-icon-on">
<svg class="lexicon-icon lexicon-icon-check" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#check" />
</svg>
</span>
<span class="toggle-switch-icon toggle-switch-icon-off">
<svg class="lexicon-icon lexicon-icon-times" focusable="false" role="presentation">
<use href="/assets/images/icons.svg#times" />
</svg>
</span>
</span>
</span>
</label>
<div style="width:80%" class="form-group panel-collapse collapse" id="metaana_d">
<label for="basicInputTypeTextarea">Description</label>
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<h4 style="display:inline">Meta-study</h4>
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<span class="panel-title"><h4>Remaining biases & impact</h4></span>
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<h4 style="display:inline">Impact of variability</h4>
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