diff --git a/onnxmltools/convert/xgboost/operator_converters/XGBoost.py b/onnxmltools/convert/xgboost/operator_converters/XGBoost.py index 1f343c7b..3c82d174 100644 --- a/onnxmltools/convert/xgboost/operator_converters/XGBoost.py +++ b/onnxmltools/convert/xgboost/operator_converters/XGBoost.py @@ -230,7 +230,7 @@ def convert(scope, operator, container): bst = xgb_node.get_booster() best_ntree_limit = getattr(bst, 'best_ntree_limit', len(js_trees)) * ncl - if best_ntree_limit < len(js_trees): + if 0 < best_ntree_limit < len(js_trees): js_trees = js_trees[:best_ntree_limit] attr_pairs = XGBClassifierConverter._get_default_tree_attribute_pairs() XGBConverter.fill_tree_attributes(js_trees, attr_pairs, [1 for _ in js_trees], True) diff --git a/tests/xgboost/data_fail_empty.csv b/tests/xgboost/data_fail_empty.csv new file mode 100644 index 00000000..b577f93c --- /dev/null +++ b/tests/xgboost/data_fail_empty.csv @@ -0,0 +1,21 @@ 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diff --git a/tests/xgboost/test_xgboost_13.py b/tests/xgboost/test_xgboost_13.py new file mode 100644 index 00000000..3164a3ae --- /dev/null +++ b/tests/xgboost/test_xgboost_13.py @@ -0,0 +1,47 @@ +# SPDX-License-Identifier: Apache-2.0 + +""" +Tests scilit-learn's tree-based methods' converters. +""" +import os +import unittest +import numpy as np +from numpy.testing import assert_almost_equal +import pandas +from sklearn.model_selection import train_test_split +from xgboost import XGBRegressor, XGBClassifier, train, DMatrix +from onnxmltools.convert import convert_xgboost +from onnxmltools.convert.common.data_types import FloatTensorType +from onnxruntime import InferenceSession + + +class TestXGBoost13(unittest.TestCase): + + def test_xgb_regressor(self): + this = os.path.dirname(__file__) + df = pandas.read_csv(os.path.join(this, "data_fail_empty.csv")) + X, y = df.drop('y', axis=1), df['y'] + X_train, X_test, y_train, y_test = train_test_split(X, y) + + clr = XGBClassifier( + max_delta_step= 0, tree_method='hist', n_estimators=100, + booster='gbtree', objective='binary:logistic', eval_metric='logloss', + learning_rate= 0.1, gamma=10, max_depth=7, min_child_weight=50, + subsample=0.75, colsample_bytree=0.75, random_state=42, + verbosity=0) + + clr.fit(X_train, y_train, eval_set=[(X_test, y_test)], + early_stopping_rounds=40) + + initial_type = [('float_input', FloatTensorType([None, 797]))] + onx = convert_xgboost(clr, initial_types=initial_type) + expected = clr.predict(X_test), clr.predict_proba(X_test) + sess = InferenceSession(onx.SerializeToString()) + X_test = X_test.values.astype(np.float32) + got = sess.run(None, {'float_input': X_test}) + assert_almost_equal(expected[1], got[1]) + assert_almost_equal(expected[0], got[0]) + + +if __name__ == "__main__": + unittest.main()