| tags |
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omh2fhir |
{%hackmd 2yYAoTGSSpiWVb7EWu6v0w %}
The following Table provides the detailed mapping for the OMH Blood Pressure DataPoint to the OMH to FHIR Observation Profile TODO: add link to map and profile:
| Index | OMH Blood Pressure Element | FHIR Attribute | Mapping Instructions |
|---|---|---|---|
| 1 | blood-pressure-3.1.json | OMH to FHIR Observation Profile | |
| 3 | body.effective_time_frame | Observation.effective[x] | Mappping depends on type- see below |
| 3.1 | body.effective_time_frame.date_time | Observation.effectiveDateTime | = body.effective_time_frame.date_time |
| 3.2 | body.effective_time_frame.time_interval | Observation.effectivePeriod | see effectivePeriod elements below |
| 3.2.1 | body.effective_time_frame.time_interval.start_date_time | Observation.effectivePeriod.start | = body.effective_time_frame.time_interval.start_date_time |
| 3.2.2 | body.effective_time_frame.time_interval.end_date_time | Observation.effectivePeriod.end | = body.effective_time_frame.time_interval.end_date_time |
| 8.1 | body.measurement_location | Observation.bodySite | See bodySite elements below |
| 8.2 | body.measurement_location | Observation.bodySite.coding[0].code | Map body.measurement_location to column 'FHIR Concept' using the OMH_FHIR_Concept_Mapping_Table |
| 8.3 | body.measurement_location | Observation.bodySite.coding[0].system | Map body.measurement_location to column 'FHIR Concept System' using the OMH_FHIR_Concept_Mapping_Table |
| 8.4 | body.measurement_location | Observation.bodySite.coding[0].display | Map body.measurement_location to column 'FHIR Concept display' using the OMH_FHIR_Concept_Mapping_Table |
| 10 | body.descriptive_statistic | Observation.code.coding[1] | Map descriptive statistic to the OMH to FHIR additional Observation codings ( code system http://www.fhir.org/guides/mfhir/omh_fhir_observation_codes). |
| 10.1 | body.descriptive_statistic | Observation.code.coding[1].code | concatenation of header.schema_id.name = 'blood-pressure' + '-' + body.descriptive_statistic for example= blood-pressure-maximum |
| 10.2 | body.descriptive_statistic | Observation.code.coding[1].system | fixed to '"http://www.fhir.org/guides/mfhir/omh_fhir_observation_codes"' |
| 10.3 | body.descriptive_statistic | Observation.code.coding[1].display | concatenation of header.schema_id.name = 'blood-pressure' + '-' + body.descriptive_statistic for example= blood-pressure-maximum |
| 11 | body.temporal_relationship_to_physical_activity | Observation.component[0] | A mapping between temporal-relationship-to-physical-activity and FHIR Observation Component data elements. Multiple components mapping are appended as a list |
| 11.A1 | body.temporal_relationship_to_physical_activity | Observation.component[0].code | A mapping between body.temporal_relationship_to_physical_activity and FHIR Observation Component.code data elements. |
| 11.A2 | body.temporal_relationship_to_physical_activity | Observation.component[0].code.coding[1].code | = 'relative-to-activity' |
| 11.A3 | body.temporal_relationship_to_physical_activity | Observation.component[0].code.coding[1].system | = "http://www.fhir.org/guides/mfhir/omh_fhir_observation_codes" |
| 11.A4 | body.temporal_relationship_to_physical_activity | Observation.component[0].code.coding[1].display | = 'OMH to FHIR Temporal Relationship To Physical Activity' |
| 11.B1 | body.temporal_relationship_to_physical_activity | Observation.component[0].valueCodeableConcept | A mapping between body.temporal_relationship_to_physical_activity and FHIR Observation Component.valueCodeableConcept data elements. |
| 11.B2 | body.temporal_relationship_to_physical_activity | Observation.component[0].valueCodeableConcept.coding[0].code | Map body.temporal_relationship_to_physical_activity to column 'FHIR Concept' using the OMH_FHIR_Concept_Mapping_Table |
| 11.B3 | body.temporal_relationship_to_physical_activity | Observation.component[0].valueCodeableConcept.coding[0].system | Map body.temporal_relationship_to_physical_activity to column 'FHIR Concept System' using the OMH_FHIR_Concept_Mapping_Table |
| 11.B4 | body.temporal_relationship_to_physical_activity | Observation.component[0].valueCodeableConcept.coding[0].display | Map body.temporal_relationship_to_physical_activity to column 'FHIR Concept display' using the OMH_FHIR_Concept_Mapping_Table |
| 11.B5 | body.temporal_relationship_to_physical_activity | Observation.component[0].valueCodeableConcept.text | = body.temporal_relationship_to_physical_activity |
| 12 | body.body_posture | Observation.component[0] | A mapping table between OMH schema ('datapoint_variables') and FHIR Observation Component data elements. Multiple components mapping are appended as a list |
| 12.A1 | body.body_posture | Observation.component[0].code | A mapping between body.body_posture and FHIR Observation Component.code data elements. |
| 12.A2 | body.body_posture | Observation.component[0].code.coding[1].code | = '271605009' |
| 12.A3 | body.body_posture | Observation.component[0].code.coding[1].system | = 'http://snomed.info/sct' |
| 12.A4 | body.body_posture | Observation.component[0].code.coding[1].display | = 'Position of body and posture (observable entity)' |
| 12.B1 | body.body_posture | Observation.component[0].valueCodeableConcept | A mapping between body.body_posture and FHIR Observation Component.valueCodeableConcept data elements. |
| 12.B2 | body.body_posture | Observation.component[0].valueCodeableConcept.coding[0].code | Map body.body_posture to column 'FHIR Concept' using the OMH_FHIR_Concept_Mapping_Table |
| 12.B3 | body.body_posture | Observation.component[0].valueCodeableConcept.coding[0].system | Map body.body_posture to column 'FHIR Concept System' using the OMH_FHIR_Concept_Mapping_Table |
| 12.B4 | body.body_posture | Observation.component[0].valueCodeableConcept.coding[0].display | Map body.body_posture to column 'FHIR Concept display' using the OMH_FHIR_Concept_Mapping_Table |
| 12.B5 | body.body_posture | Observation.component[0].valueCodeableConcept.text | = body.body_posture |
| 13 | body.diastolic_blood_pressure | Observation.component[0] | A mapping between OMH schema ('datapoint_variables') and FHIR Observation Component data elements. Multiple components are appended as a list |
| 13.A1 | body.diastolic_blood_pressure | Observation.component[0].code | A mapping between body.diastolic_blood_pressure and FHIR Observation Component.code data elements. |
| 13.A2 | body.diastolic_blood_pressure | Observation.component[0].code.coding[1].code | = '8462-4' |
| 13.A3 | body.diastolic_blood_pressure | Observation.component[0].code.coding[1].system | = 'http://loinc.org' |
| 13.A4 | body.diastolic_blood_pressure | Observation.component[0].code.coding[1].display | = 'Diastolic blood pressure' |
| 13.B1 | body.diastolic_blood_pressure | Observation.component[0].valueQuantity | see valueQuantity elements below |
| 13.B2 | body.diastolic_blood_pressure | Observation.component[0].valueQuantity.value | = body.diastolic_blood_pressure |
| 13.B3 | body.diastolic_blood_pressure | Observation.component[0].valueQuantity.unit | = 'mmHg' |
| 13.B4 | body.diastolic_blood_pressure | Observation.component[0].valueQuantity.system | fixed to 'http://unitsofmeasure.org' |
| 13.B5 | body.diastolic_blood_pressure | Observation.component[0].valueQuantity.code | = 'mm[Hg]' |
| 14 | body.systolic_blood_pressure | Observation.component[0] | A mapping between OMH schema ('datapoint_variables') and FHIR Observation Component data elements. Multiple components are appended as a list |
| 14.A1 | body.systolic_blood_pressure | Observation.component[0].code | 0 |
| 14.A2 | body.systolic_blood_pressure | Observation.component[0].code.coding[1].code | = '8480-6' |
| 14.A3 | body.systolic_blood_pressure | Observation.component[0].code.coding[1].system | = 'http://loinc.org' |
| 14.A4 | body.systolic_blood_pressure | Observation.component[0].code.coding[1].display | = 'Systolic blood pressure' |
| 14.B1 | body.systolic_blood_pressure | Observation.component[0].valueQuantity | see valueQuantity elements below |
| 14.B2 | body.systolic_blood_pressure.value | Observation.component[0].valueQuantity.value | = body.systolic_blood_pressure.value |
| 14.B3 | body.systolic_blood_pressure.unit | Observation.component[0].valueQuantity.unit | = 'mmHg' |
| 14.B4 | body.systolic_blood_pressure.unit | Observation.component[0].valueQuantity.system | fixed to 'http://unitsofmeasure.org' |
| 14.B5 | body.systolic_blood_pressure.unit | Observation.component[0].valueQuantity.code | = 'mm[Hg]' |
The following OMH blood-pressure schema instance:
{
"header": {
"id": "3f4a6a06-8613-4186-b004-6a1df5bfab0c",
"creation_date_time": "2020-05-30T01:47:30.787746Z",
"schema_id": {
"namespace": "omh",
"name": "blood-pressure",
"version": "3.1"
},
"acquisition_provenance": {
"source_name": "Acme blood-pressure device",
"source_creation_date_time": "2020-05-30T01:47:30.787746Z",
"source_data_point_id": "901fd78b-1a23-4eac-ba5e-b7a8b168082f",
"modality": "sensed"
},
"user_id": "62d9a6cc-4a8f-455d-926b-6929ff88c635"
},
"body": {
"systolic_blood_pressure": {
"value": 115,
"unit": "mmHg"
},
"diastolic_blood_pressure": {
"value": 60,
"unit": "mmHg"
},
"effective_time_frame": {
"date_time": "2020-02-05T07:25:00-08:00"
}
}
}Maps to this FHIR Observation (note that this example does not include the optional Provenance resource)
{
"resourceType": "Observation",
"meta": {
"profile": [
"http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_profile_quantitative_observation"
]
},
"identifier": [
{
"system": "https://omh.org/shimmer/ids",
"value": "3f4a6a06-8613-4186-b004-6a1df5bfab0c"
}
],
"status": "unknown",
"category": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "vital-signs",
"display": "Vital Signs"
}
]
}
],
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "85354-9",
"display": "Blood pressure panel with all children optional"
}
]
},
"subject": {
"identifier": {
"system": "https://omh.org/shimmer/patient_ids",
"value": "62d9a6cc-4a8f-455d-926b-6929ff88c635"
}
},
"effectiveDateTime": "2020-02-05T07:25:00-08:00",
"issued": "2020-05-30T01:47:30.787746Z",
"device": {
"extension": [
{
"url": "http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_observation_device_modality",
"valueCode": "sensed"
}
],
"display": "Acme blood-pressure device"
},
"component": [
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8462-4",
"display": "Diastolic blood pressure"
}
]
},
"valueQuantity": {
"value": 60,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8480-6",
"display": "Systolic blood pressure"
}
]
},
"valueQuantity": {
"value": 115,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
}
]
}The following OMH blood-pressure schema instance:
{
"header": {
"id": "44be6623-1b96-4e6d-880f-db5b43baf2c4",
"creation_date_time": "2020-05-30T01:49:02.722676Z",
"schema_id": {
"namespace": "omh",
"name": "blood-pressure",
"version": "3.1"
},
"acquisition_provenance": {
"source_name": "Acme blood-pressure device",
"source_creation_date_time": "2020-05-30T01:49:02.722676Z",
"source_data_point_id": "4ca1c2e0-df11-4e1b-855c-3e57611914ee",
"modality": "sensed"
},
"user_id": "f1dce69b-b129-4579-be97-2025e5de2326"
},
"body": {
"systolic_blood_pressure": {
"value": 140,
"unit": "mmHg"
},
"diastolic_blood_pressure": {
"value": 60,
"unit": "mmHg"
},
"body_posture": "sitting",
"measurement_location": "left upper arm",
"effective_time_frame": {
"date_time": "2020-02-05T07:25:00-08:00"
}
}
}Maps to this FHIR Observation (note that this example does not include the optional Provenance resource)
{
"resourceType": "Observation",
"meta": {
"profile": [
"http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_profile_quantitative_observation"
]
},
"identifier": [
{
"system": "https://omh.org/shimmer/ids",
"value": "44be6623-1b96-4e6d-880f-db5b43baf2c4"
}
],
"status": "unknown",
"category": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "vital-signs",
"display": "Vital Signs"
}
]
}
],
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "85354-9",
"display": "Blood pressure panel with all children optional"
}
]
},
"subject": {
"identifier": {
"system": "https://omh.org/shimmer/patient_ids",
"value": "f1dce69b-b129-4579-be97-2025e5de2326"
}
},
"effectiveDateTime": "2020-02-05T07:25:00-08:00",
"issued": "2020-05-30T01:49:02.722676Z",
"bodySite": {
"coding": [
{
"system": "http://www.fhir.org/guides/mfhir/CodeSystem/body-location",
"code": "left upper arm"
}
],
"text": "left upper arm"
},
"device": {
"extension": [
{
"url": "http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_observation_device_modality",
"valueCode": "sensed"
}
],
"display": "Acme blood-pressure device"
},
"component": [
{
"code": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "271605009",
"display": "Position of body and posture (observable entity)"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "33586001",
"display": "Sitting position"
}
],
"text": "sitting"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8462-4",
"display": "Diastolic blood pressure"
}
]
},
"valueQuantity": {
"value": 60,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8480-6",
"display": "Systolic blood pressure"
}
]
},
"valueQuantity": {
"value": 140,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
}
]
}The following OMH blood-pressure schema instance:
{
"header": {
"id": "95858035-3be4-4ff4-9acd-abf28bcc6132",
"creation_date_time": "2020-05-30T01:52:37.530636Z",
"schema_id": {
"namespace": "omh",
"name": "blood-pressure",
"version": "3.1"
},
"acquisition_provenance": {
"source_name": "Acme blood-pressure device",
"source_creation_date_time": "2020-05-30T01:52:37.530636Z",
"source_data_point_id": "1cf6b6f3-98c9-45ab-9cfd-11fbc784ed7a",
"modality": "sensed"
},
"user_id": "4540ac92-0183-4dc1-8e6e-307b4fa945b2"
},
"body": {
"systolic_blood_pressure": {
"value": 160,
"unit": "mmHg"
},
"diastolic_blood_pressure": {
"value": 60,
"unit": "mmHg"
},
"effective_time_frame": {
"time_interval": {
"start_date_time": "2020-02-05T07:00:00-08:00",
"end_date_time": "2020-02-12T07:00:00-08:00"
}
},
"body_posture": "sitting",
"measurement_location": "left wrist",
"descriptive_statistic": "maximum"
}
}Maps to this FHIR Observation (note that this example does not include the optional Provenance resource)
{
"resourceType": "Observation",
"meta": {
"profile": [
"http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_profile_quantitative_observation"
]
},
"identifier": [
{
"system": "https://omh.org/shimmer/ids",
"value": "95858035-3be4-4ff4-9acd-abf28bcc6132"
}
],
"status": "unknown",
"category": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "vital-signs",
"display": "Vital Signs"
}
]
}
],
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "85354-9",
"display": "Blood pressure panel with all children optional"
},
{
"system": "http://hl7.org/fhir/omh_fhir_observation_codes",
"code": "blood-pressure-maximum",
"display": "Blood Pressure-Maximum"
}
]
},
"subject": {
"identifier": {
"system": "https://omh.org/shimmer/patient_ids",
"value": "4540ac92-0183-4dc1-8e6e-307b4fa945b2"
}
},
"effectivePeriod": {
"start": "2020-02-05T07:00:00-08:00",
"end": "2020-02-12T07:00:00-08:00"
},
"issued": "2020-05-30T01:52:37.530636Z",
"bodySite": {
"coding": [
{
"system": "http://www.fhir.org/guides/mfhir/CodeSystem/body-location",
"code": "left wrist"
}
],
"text": "left wrist"
},
"device": {
"extension": [
{
"url": "http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_observation_device_modality",
"valueCode": "sensed"
}
],
"display": "Acme blood-pressure device"
},
"component": [
{
"code": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "271605009",
"display": "Position of body and posture (observable entity)"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "33586001",
"display": "Sitting position"
}
],
"text": "sitting"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8462-4",
"display": "Diastolic blood pressure"
}
]
},
"valueQuantity": {
"value": 60,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8480-6",
"display": "Systolic blood pressure"
}
]
},
"valueQuantity": {
"value": 160,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
}
]
}The following OMH blood-pressure schema instance:
{
"header": {
"id": "c87d4272-0f9a-4cf7-bff8-54113e9d4f31",
"creation_date_time": "2020-05-30T01:54:59.483554Z",
"schema_id": {
"namespace": "omh",
"name": "blood-pressure",
"version": "3.1"
},
"acquisition_provenance": {
"source_name": "Acme blood-pressure device",
"source_creation_date_time": "2020-05-30T01:54:59.483554Z",
"source_data_point_id": "c68a592d-b776-424c-b6cc-f7427a1779d4",
"modality": "sensed"
},
"user_id": "7cc36b4a-ecb1-4b87-a70d-348e27eb4d6d"
},
"body": {
"systolic_blood_pressure": {
"value": 125,
"unit": "mmHg"
},
"diastolic_blood_pressure": {
"value": 60,
"unit": "mmHg"
},
"body_posture": "sitting",
"measurement_location": "left wrist",
"temporal_relationship_to_physical_activity": "at rest",
"effective_time_frame": {
"date_time": "2020-02-05T07:25:00-08:00"
}
}
}Maps to this FHIR Observation (note that this example does not include the optional Provenance resource)
{
"resourceType": "Observation",
"meta": {
"profile": [
"http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_profile_quantitative_observation"
]
},
"identifier": [
{
"system": "https://omh.org/shimmer/ids",
"value": "c87d4272-0f9a-4cf7-bff8-54113e9d4f31"
}
],
"status": "unknown",
"category": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "vital-signs",
"display": "Vital Signs"
}
]
}
],
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "85354-9",
"display": "Blood pressure panel with all children optional"
}
]
},
"subject": {
"identifier": {
"system": "https://omh.org/shimmer/patient_ids",
"value": "7cc36b4a-ecb1-4b87-a70d-348e27eb4d6d"
}
},
"effectiveDateTime": "2020-02-05T07:25:00-08:00",
"issued": "2020-05-30T01:54:59.483554Z",
"bodySite": {
"coding": [
{
"system": "http://www.fhir.org/guides/mfhir/CodeSystem/body-location",
"code": "left wrist"
}
],
"text": "left wrist"
},
"device": {
"extension": [
{
"url": "http://www.fhir.org/mfhir/StructureDefinition/omh_fhir_observation_device_modality",
"valueCode": "sensed"
}
],
"display": "Acme blood-pressure device"
},
"component": [
{
"code": {
"coding": [
{
"system": "http://www.fhir.org/guides/mfhir/omh_fhir_observation_codes",
"code": "relative-to-activity",
"display": "OMH to FHIR Temporal Relationship To Physical Activity"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "263678003",
"display": "At rest"
}
],
"text": "at rest"
}
},
{
"code": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "271605009",
"display": "Position of body and posture (observable entity)"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "33586001",
"display": "Sitting position"
}
],
"text": "sitting"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8462-4",
"display": "Diastolic blood pressure"
}
]
},
"valueQuantity": {
"value": 60,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "8480-6",
"display": "Systolic blood pressure"
}
]
},
"valueQuantity": {
"value": 125,
"unit": "mmHg",
"system": "http://unitsofmeasure.org",
"code": "mm[Hg]"
}
}
]
}