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@NeotomaDB The Neotoma Paleoecology Database Collective

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    63 repositories

    • DataBUS_Ostracode

      Public
      Python
      •0•0•0•0•Updated Dec 13, 2024Dec 13, 2024

    • api_nodetest

      Public
      node.js and express implementation for the Neotoma API
      nodejsapiexpresspaleoecologyswaggerneotomaneotoma-databaseneotoma-api
      HTML
      •
      MIT License
      •0•2•33•5•Updated Dec 13, 2024Dec 13, 2024

    • DataBUS

      Public
      The Neotoma Paleoecology Database Data Bulk Uploader System
      Python
      •1•0•0•0•Updated Dec 11, 2024Dec 11, 2024

    • clean_backup

      Public
      Shell
      •
      MIT License
      •0•0•1•0•Updated Dec 9, 2024Dec 9, 2024

    • Interoperability_DeepDive

      Public
      A repository for managing the FAIROS Quaternary Interoperability project.
      networkxnetwork-analysisneotomapaleoecologyneotoma-databasexdeepdive
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 4, 2024Dec 4, 2024

    • landingpagev3

      Public
      A repository for the updated (Vue3) Neotoma Landing Pages
      CSS
      •
      MIT License
      •0•0•1•0•Updated Nov 28, 2024Nov 28, 2024

    • api_dockers

      Public
      A repository for docker containers that can be used to run a local version of the Neotoma infrastructure.
      Dockerfile
      •
      MIT License
      •1•0•0•0•Updated Nov 27, 2024Nov 27, 2024

    • tilia_api

      Public
      A repository for the implementation of the Tilia/uploader API
      JavaScript
      •
      MIT License
      •1•0•9•1•Updated Nov 25, 2024Nov 25, 2024

    • article-relevance

      Public
      Repository based on the UBC MDS Meta Extractor Project that just uses the article relevance component.
      Python
      •
      MIT License
      •3•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • Neotoma_SQL

      Public
      Repository for functions associated with Neotoma's Postgres DB
      sqlpaleoecologypostgresneotoma
      Python
      •
      MIT License
      •0•1•3•0•Updated Nov 6, 2024Nov 6, 2024

    • article_project

      Public
      A project for the Docker Containers associated with the article-recommender.
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Oct 8, 2024Oct 8, 2024

    • xlsx2Tilia

      Public
      Tilia file creation (XML) from an MS Excel database and template in Python
      pythonxmlneotoma-databasetilia
      Python
      •
      MIT License
      •0•1•0•0•Updated Sep 13, 2024Sep 13, 2024

    • neotoma_article_api

      Public
      A repository for the article relevance tool API
      JavaScript
      •0•0•0•0•Updated Sep 11, 2024Sep 11, 2024

    • NeotomaSummary

      Public
      A repository to generate an overal summary of the Neotoma DB from a set of SQL and API calls.
      sqlrmarkdownneotoma-database
      HTML
      •
      Other
      •1•0•0•0•Updated Sep 5, 2024Sep 5, 2024

    • neotoma2

      Public
      Repository for the updated neotoma R package.
      rrstatsneotomansfpaleoecologyearthcube
      R
      •
      MIT License
      •10•8•10•0•Updated Aug 14, 2024Aug 14, 2024

    • neotomadb.github.io

      Public
      Neotoma website on github.
      HTML
      •
      MIT License
      •0•1•1•0•Updated Jul 16, 2024Jul 16, 2024

    • neotoma_doi

      Public
      Managing DOIs with a postgres database and the DataCite API.
      R
      •
      MIT License
      •0•1•5•0•Updated Jun 5, 2024Jun 5, 2024

    • Current_Workshop

      Public
      Current Workshops for Neotoma
      HTML
      •
      MIT License
      •4•3•1•0•Updated May 31, 2024May 31, 2024

    • Workshops

      Public
      This repository is a location for storing and developing workshops materials.
      HTML
      •
      MIT License
      •4•2•3•0•Updated May 28, 2024May 28, 2024

    • DataBUS_210Pb

      Public
      The Neotoma Paleoecology Database Data Bulk Uploader System
      Python
      •1•0•0•0•Updated May 16, 2024May 16, 2024

    • Explorer

      Public
      Neotoma Explorer - issue tracker and code repository
      JavaScript
      •0•2•22•0•Updated Apr 18, 2024Apr 18, 2024

    • MetaExtractor

      Public
      A repository for the UBC MDS Capstone team to develop a metadata extractor for Neotoma
      nlpmachine-learningdoirelevanceneotomacrossrefmetadata-extractionxdd
      Jupyter Notebook
      •
      MIT License
      •3•8•4•1•Updated Feb 2, 2024Feb 2, 2024

    • neotoma_lakes

      Public
      A repository for managing the matching of lake data between national hydrographic databases and Neotoma records.
      databasermarkdownlakesusgsneotomapaleoecology
      HTML
      •
      MIT License
      •1•1•5•0•Updated Jan 19, 2024Jan 19, 2024

    • neotoma_bookdown

      Public
      An online manual for the Neotoma Database, authored using Bookdown.
      CSS
      •0•0•0•0•Updated Nov 23, 2023Nov 23, 2023

    • DwC-Mapping

      Public
      A document explaining how we will map Neotoma against the DarwinCore Schema
      HTML
      •
      MIT License
      •0•0•7•0•Updated Nov 22, 2023Nov 22, 2023

    • neotomataxonomy

      Public
      A viewer for Neotoma Taxonomic data.
      HTML
      •1•0•0•0•Updated Nov 16, 2023Nov 16, 2023

    • SQL_Project_Repository

      Public
      A repository for SQL project starts.
      Python
      •0•0•0•0•Updated Nov 14, 2023Nov 14, 2023

    • MetaExtractor_Paper

      Public
      TeX
      •
      MIT License
      •0•1•0•0•Updated Aug 31, 2023Aug 31, 2023

    • ndbLandingPage

      Public
      A repository for DOI landing pages using Vue.js as the front-end.
      vuejsdoineotoma
      Vue
      •
      MIT License
      •3•1•1•0•Updated Jul 25, 2023Jul 25, 2023

    • EPD_binder

      Public
      Neotoma Binder for EPD 2022 with sample workflows
      HTML
      •
      MIT License
      •4•1•0•0•Updated Jul 6, 2023Jul 6, 2023