Repositories list

• OHSU_TMT_Publications

  Public
  List of publications where TMT labeling was used in the OHSU PSR core.

  MIT License

  •1•0•0•0•Updated Sep 12, 2021Sep 12, 2021

• Start_Here

  Public
  Roadmap to OHSU-Proteomics repositories (links and descriptions).

  MIT License

  •0•0•0•0•Updated Sep 3, 2021Sep 3, 2021

• Gene-set-enrichment_STRING-DB

  Public
  Using STRING-DB to do gene set enrichment analyses

  MIT License

  •0•2•0•0•Updated Sep 3, 2021Sep 3, 2021

• working-with-PAW-results-files

  Public
  Guide to understanding and working with PAW pipeline results files.

  MIT License

  •0•0•0•0•Updated Aug 29, 2021Aug 29, 2021

• basic_proteomics_workflows

  Public
  A walk through of basic proteomics workflows in use at the OHSU PSR core.

  MIT License

  •0•0•0•0•Updated May 8, 2021May 8, 2021

• Data_Analysis_Overview

  Public
  An overview of common data analysis methods used by PSR.

  MIT License

  •0•0•0•0•Updated Oct 11, 2020Oct 11, 2020

• PRIDE_submission_tutorial

  Public
  A lighthearted guide to submitting proteomics data to PRIDE.

  MIT License

  •0•0•0•0•Updated Jul 8, 2020Jul 8, 2020

• squirrel_platelets_TMT_2020

  Public
  Description of a TMT study of hibernating squirrel platelet samples performed at the OHSU PSR

  MIT License

  •0•1•0•0•Updated Jun 28, 2020Jun 28, 2020

• Eclipse_to_Fusion_comparison

  Public
  A comparison of one sample on a Thermo Fusion to a new Thermo Eclipse (with RTS in the mix).

  MIT License

  •0•0•0•0•Updated May 25, 2020May 25, 2020

• Velos_Pro_Use

  Public
  Capabilities and how to use the Velos Pro linear ion trap.

  MIT License

  •0•0•0•0•Updated May 12, 2020May 12, 2020

• LC-MSMS

  Public
  Guide to liquid chromatography mass spectrometry at the OHSU PSR proteomics core.

  MIT License

  •0•1•0•0•Updated May 11, 2020May 11, 2020

• TMT_overview_2020

  Public
  General overview of performing tandem mass tags (TMT) quantitative proteomics experiments.

  MIT License

  •1•0•0•0•Updated Apr 23, 2020Apr 23, 2020