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    • crate

      Public
      Create and use de-identified research databases. Preprocess, extract text, anonymise/de-identify, link, apply natural language processing, query for research, manage consent for contact.
      Python
      GNU General Public License v3.0
      819141Updated Dec 31, 2024Dec 31, 2024
    • Docker for InterMine
      Shell
      GNU Lesser General Public License v2.1
      19000Updated Dec 18, 2024Dec 18, 2024
    • Java
      1000Updated Dec 18, 2024Dec 18, 2024
    • Create files with fake data. In many formats. With no efforts.
      Python
      MIT License
      4000Updated Nov 14, 2024Nov 14, 2024
    • camcops

      Public
      Cambridge Cognitive and Psychiatric Test Kit (CamCOPS)
      Python
      Other
      812630Updated Oct 15, 2024Oct 15, 2024
    • InterMine Client library in Python
      Python
      BSD 2-Clause "Simplified" License
      34000Updated Sep 2, 2024Sep 2, 2024
    • Bitfount Datasource for access to Intermine instance
      Python
      Apache License 2.0
      0000Updated Aug 27, 2024Aug 27, 2024
    • Parcellations and brain maps
      MATLAB
      3300Updated Dec 18, 2023Dec 18, 2023
    • UKB

      Public
      repository for scripts used in UK BioBank analyses
      HTML
      GNU General Public License v3.0
      63400Updated Nov 18, 2023Nov 18, 2023
    • An awesome Python wrapper for an awesome Docker CLI!
      Python
      MIT License
      107000Updated Aug 11, 2023Aug 11, 2023
    • aqt: Another (unofficial) Qt CLI Installer on multi-platforms
      Python
      MIT License
      91000Updated Jul 22, 2023Jul 22, 2023
    • ABCD

      Public
      Shell
      1400Updated Jun 18, 2023Jun 18, 2023
    • client-py

      Public
      Python SMART on FHIR client
      Python
      Other
      213000Updated Jan 9, 2023Jan 9, 2023
    • Lifespan

      Public
      Code used in the lifespan brainchart project
      R
      Other
      233200Updated Oct 11, 2022Oct 11, 2022
    • Documentation for datasets internally available on CSD3
      HTML
      0300Updated Dec 9, 2020Dec 9, 2020
    • NSPN

      Public
      MATLAB
      0000Updated Jan 27, 2020Jan 27, 2020
    • repository for script used in combining gene expression with neuroimaging
      R
      GNU General Public License v3.0
      3000Updated Feb 18, 2019Feb 18, 2019
    • PGSinUKB

      Public
      5000Updated Jan 31, 2019Jan 31, 2019
    • Tools for mesh surface-based operations
      Python
      MIT License
      12000Updated Oct 27, 2018Oct 27, 2018
    • This repository contains code required to create fun "thank you" packs for participants in MRI studies. It takes the structural scans and makes pictures and movies of the brain. The appropriate programs are also included.
      Python
      MIT License
      6100Updated Nov 30, 2015Nov 30, 2015