pyproject.toml

[build-system]
requires = ["setuptools >= 61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "concordex"
version = "1.0.2"
description = "Identification of spatial homogeneous regions with concordex"
readme = "README.md"
requires-python = ">=3.9"
authors = [
    {name = "Kayla Jackson", email = "kaylajac@caltech.edu"} , 
    {name = "A. Sina Booeshaghi", email = "sinab@berkeley.edu"},
    {name = "Angel Galvez-Merchan", email = "angelgalvez94@gmail.com"},
    {name = "Alexandra Kim", email = "alexandrasuriya@gmail.com"}
]
maintainers = [{name = "Kayla Jackson", email = "kaylajac@caltech.edu"}]
license = {file = "LICENSE"}
keywords = ["SingleCell", "Clustering", "Spatial", "Transcriptomics"]
dependencies = [
    "anndata>=0.8",
	"numpy>=1.23",
	"pandas>=1.5",
	"scikit-learn>=0.24"
]
classifiers = [
	"Environment :: Console",
	"Intended Audience :: Science/Research",
	"License :: OSI Approved :: MIT License",
	"Operating System :: OS Independent",
	"Programming Language :: Python :: 3.6",
	"Programming Language :: Python :: 3.7",
	"Programming Language :: Python :: 3.8",
	"Programming Language :: Python :: 3.9",
	"Programming Language :: Python :: 3.10",
	"Topic :: Scientific/Engineering :: Bio-Informatics",
	"Topic :: Utilities"
]

[project.urls]
Repository = "https://github.com/pachterlab/concordex"

[tool.setuptools]
packages = { find = {} }

[tool.bumpversion]
current_version = "1.0.2"
commit = true
tag = false
files = [
    "concordex/__init__.py",
    "README.md"
]

[tool.flake8]
exclude = [".git", ".github", "__pycache__", "build", "dist"]
statistics = true
max-line-length = 88
extend-ignore = ["E203", "E501"]