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_normalize.py
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_normalize.py
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# ---------------------------------------------------------------------
# JSON normalization routines
from collections import defaultdict
import copy
from typing import Any, DefaultDict, Dict, Iterable, List, Optional, Union
import numpy as np
from pandas._libs.writers import convert_json_to_lines
from pandas._typing import Scalar
from pandas.util._decorators import deprecate
import pandas as pd
from pandas import DataFrame
def convert_to_line_delimits(s):
"""
Helper function that converts JSON lists to line delimited JSON.
"""
# Determine we have a JSON list to turn to lines otherwise just return the
# json object, only lists can
if not s[0] == "[" and s[-1] == "]":
return s
s = s[1:-1]
return convert_json_to_lines(s)
def nested_to_record(
ds,
prefix: str = "",
sep: str = ".",
level: int = 0,
max_level: Optional[int] = None,
):
"""
A simplified json_normalize
Converts a nested dict into a flat dict ("record"), unlike json_normalize,
it does not attempt to extract a subset of the data.
Parameters
----------
ds : dict or list of dicts
prefix: the prefix, optional, default: ""
sep : str, default '.'
Nested records will generate names separated by sep,
e.g., for sep='.', { 'foo' : { 'bar' : 0 } } -> foo.bar
level: int, optional, default: 0
The number of levels in the json string.
max_level: int, optional, default: None
The max depth to normalize.
.. versionadded:: 0.25.0
Returns
-------
d - dict or list of dicts, matching `ds`
Examples
--------
IN[52]: nested_to_record(dict(flat1=1,dict1=dict(c=1,d=2),
nested=dict(e=dict(c=1,d=2),d=2)))
Out[52]:
{'dict1.c': 1,
'dict1.d': 2,
'flat1': 1,
'nested.d': 2,
'nested.e.c': 1,
'nested.e.d': 2}
"""
singleton = False
if isinstance(ds, dict):
ds = [ds]
singleton = True
new_ds = []
for d in ds:
new_d = copy.deepcopy(d)
for k, v in d.items():
# each key gets renamed with prefix
if not isinstance(k, str):
k = str(k)
if level == 0:
newkey = k
else:
newkey = prefix + sep + k
# flatten if type is dict and
# current dict level < maximum level provided and
# only dicts gets recurse-flattened
# only at level>1 do we rename the rest of the keys
if not isinstance(v, dict) or (
max_level is not None and level >= max_level
):
if level != 0: # so we skip copying for top level, common case
v = new_d.pop(k)
new_d[newkey] = v
continue
else:
v = new_d.pop(k)
new_d.update(nested_to_record(v, newkey, sep, level + 1, max_level))
new_ds.append(new_d)
if singleton:
return new_ds[0]
return new_ds
def _json_normalize(
data: Union[Dict, List[Dict]],
record_path: Optional[Union[str, List]] = None,
meta: Optional[Union[str, List[Union[str, List[str]]]]] = None,
meta_prefix: Optional[str] = None,
record_prefix: Optional[str] = None,
errors: str = "raise",
sep: str = ".",
max_level: Optional[int] = None,
) -> "DataFrame":
"""
Normalize semi-structured JSON data into a flat table.
Parameters
----------
data : dict or list of dicts
Unserialized JSON objects.
record_path : str or list of str, default None
Path in each object to list of records. If not passed, data will be
assumed to be an array of records.
meta : list of paths (str or list of str), default None
Fields to use as metadata for each record in resulting table.
meta_prefix : str, default None
If True, prefix records with dotted (?) path, e.g. foo.bar.field if
meta is ['foo', 'bar'].
record_prefix : str, default None
If True, prefix records with dotted (?) path, e.g. foo.bar.field if
path to records is ['foo', 'bar'].
errors : {'raise', 'ignore'}, default 'raise'
Configures error handling.
* 'ignore' : will ignore KeyError if keys listed in meta are not
always present.
* 'raise' : will raise KeyError if keys listed in meta are not
always present.
sep : str, default '.'
Nested records will generate names separated by sep.
e.g., for sep='.', {'foo': {'bar': 0}} -> foo.bar.
max_level : int, default None
Max number of levels(depth of dict) to normalize.
if None, normalizes all levels.
.. versionadded:: 0.25.0
Returns
-------
frame : DataFrame
Normalize semi-structured JSON data into a flat table.
Examples
--------
>>> data = [{'id': 1, 'name': {'first': 'Coleen', 'last': 'Volk'}},
... {'name': {'given': 'Mose', 'family': 'Regner'}},
... {'id': 2, 'name': 'Faye Raker'}]
>>> pandas.json_normalize(data)
id name name.family name.first name.given name.last
0 1.0 NaN NaN Coleen NaN Volk
1 NaN NaN Regner NaN Mose NaN
2 2.0 Faye Raker NaN NaN NaN NaN
>>> data = [{'id': 1,
... 'name': "Cole Volk",
... 'fitness': {'height': 130, 'weight': 60}},
... {'name': "Mose Reg",
... 'fitness': {'height': 130, 'weight': 60}},
... {'id': 2, 'name': 'Faye Raker',
... 'fitness': {'height': 130, 'weight': 60}}]
>>> json_normalize(data, max_level=0)
fitness id name
0 {'height': 130, 'weight': 60} 1.0 Cole Volk
1 {'height': 130, 'weight': 60} NaN Mose Reg
2 {'height': 130, 'weight': 60} 2.0 Faye Raker
Normalizes nested data up to level 1.
>>> data = [{'id': 1,
... 'name': "Cole Volk",
... 'fitness': {'height': 130, 'weight': 60}},
... {'name': "Mose Reg",
... 'fitness': {'height': 130, 'weight': 60}},
... {'id': 2, 'name': 'Faye Raker',
... 'fitness': {'height': 130, 'weight': 60}}]
>>> json_normalize(data, max_level=1)
fitness.height fitness.weight id name
0 130 60 1.0 Cole Volk
1 130 60 NaN Mose Reg
2 130 60 2.0 Faye Raker
>>> data = [{'state': 'Florida',
... 'shortname': 'FL',
... 'info': {'governor': 'Rick Scott'},
... 'counties': [{'name': 'Dade', 'population': 12345},
... {'name': 'Broward', 'population': 40000},
... {'name': 'Palm Beach', 'population': 60000}]},
... {'state': 'Ohio',
... 'shortname': 'OH',
... 'info': {'governor': 'John Kasich'},
... 'counties': [{'name': 'Summit', 'population': 1234},
... {'name': 'Cuyahoga', 'population': 1337}]}]
>>> result = json_normalize(data, 'counties', ['state', 'shortname',
... ['info', 'governor']])
>>> result
name population state shortname info.governor
0 Dade 12345 Florida FL Rick Scott
1 Broward 40000 Florida FL Rick Scott
2 Palm Beach 60000 Florida FL Rick Scott
3 Summit 1234 Ohio OH John Kasich
4 Cuyahoga 1337 Ohio OH John Kasich
>>> data = {'A': [1, 2]}
>>> json_normalize(data, 'A', record_prefix='Prefix.')
Prefix.0
0 1
1 2
Returns normalized data with columns prefixed with the given string.
"""
def _pull_field(
js: Dict[str, Any], spec: Union[List, str]
) -> Union[Scalar, Iterable]:
"""Internal function to pull field"""
result = js
if isinstance(spec, list):
for field in spec:
result = result[field]
else:
result = result[spec]
return result
def _pull_records(js: Dict[str, Any], spec: Union[List, str]) -> List:
"""
Internal function to pull field for records, and similar to
_pull_field, but require to return list. And will raise error
if has non iterable value.
"""
result = _pull_field(js, spec)
# GH 31507 GH 30145, GH 26284 if result is not list, raise TypeError if not
# null, otherwise return an empty list
if not isinstance(result, list):
if pd.isnull(result):
result = []
else:
raise TypeError(
f"{js} has non list value {result} for path {spec}. "
"Must be list or null."
)
return result
if isinstance(data, list) and not data:
return DataFrame()
# A bit of a hackjob
if isinstance(data, dict):
data = [data]
if record_path is None:
if any([isinstance(x, dict) for x in y.values()] for y in data):
# naive normalization, this is idempotent for flat records
# and potentially will inflate the data considerably for
# deeply nested structures:
# {VeryLong: { b: 1,c:2}} -> {VeryLong.b:1 ,VeryLong.c:@}
#
# TODO: handle record value which are lists, at least error
# reasonably
data = nested_to_record(data, sep=sep, max_level=max_level)
return DataFrame(data)
elif not isinstance(record_path, list):
record_path = [record_path]
if meta is None:
meta = []
elif not isinstance(meta, list):
meta = [meta]
_meta = [m if isinstance(m, list) else [m] for m in meta]
# Disastrously inefficient for now
records: List = []
lengths = []
meta_vals: DefaultDict = defaultdict(list)
meta_keys = [sep.join(val) for val in _meta]
def _recursive_extract(data, path, seen_meta, level=0):
if isinstance(data, dict):
data = [data]
if len(path) > 1:
for obj in data:
for val, key in zip(_meta, meta_keys):
if level + 1 == len(val):
seen_meta[key] = _pull_field(obj, val[-1])
_recursive_extract(obj[path[0]], path[1:], seen_meta, level=level + 1)
else:
for obj in data:
recs = _pull_records(obj, path[0])
recs = [
nested_to_record(r, sep=sep, max_level=max_level)
if isinstance(r, dict)
else r
for r in recs
]
# For repeating the metadata later
lengths.append(len(recs))
for val, key in zip(_meta, meta_keys):
if level + 1 > len(val):
meta_val = seen_meta[key]
else:
try:
meta_val = _pull_field(obj, val[level:])
except KeyError as e:
if errors == "ignore":
meta_val = np.nan
else:
raise KeyError(
"Try running with errors='ignore' as key "
f"{e} is not always present"
) from e
meta_vals[key].append(meta_val)
records.extend(recs)
_recursive_extract(data, record_path, {}, level=0)
result = DataFrame(records)
if record_prefix is not None:
result = result.rename(columns=lambda x: f"{record_prefix}{x}")
# Data types, a problem
for k, v in meta_vals.items():
if meta_prefix is not None:
k = meta_prefix + k
if k in result:
raise ValueError(
f"Conflicting metadata name {k}, need distinguishing prefix "
)
result[k] = np.array(v, dtype=object).repeat(lengths)
return result
json_normalize = deprecate(
"pandas.io.json.json_normalize", _json_normalize, "1.0.0", "pandas.json_normalize"
)