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profile_infnan.yml
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name: Plot performance profiles, broken infnan
on:
# Trigger the workflow on push or pull request
#push:
#pull_request: # DANGEROUS! MUST be disabled for self-hosted runners!
# Trigger the workflow by cron. The default time zone of GitHub Actions is UTC.
schedule:
- cron: '0 4 2-31/4 * *'
# Trigger the workflow manually
workflow_dispatch:
inputs:
git-ref:
description: Git Ref (Optional)
required: false
# Show the git ref in the workflow name if it is invoked manually.
run-name: ${{ github.event_name == 'workflow_dispatch' && format('Manual run {0}', inputs.git-ref) || '' }}
jobs:
test:
name: Profile PRIMA.
runs-on: ${{ matrix.os }}
continue-on-error: true
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
matlab: [latest]
dim: [small]
solver: [cobylal, cobylan, uobyqa, newuoa, bobyqa, lincoa] # prima is too expensive
compiler_options: [-O0, -O1, -O2, -O3, -Ofast -fno-stack-arrays, -ffast-math]
competitor: [norma]
steps:
- name: Get the solver name
run: echo "SOLNAME=$(echo ${{ matrix.solver }} | cut -c1-6)" >> $GITHUB_ENV
- name: Run `sudo apt update`
run: sudo apt update # Otherwise, free-disk-space or other actions relying on `apt` may fail
- name: Free disk space
uses: jlumbroso/free-disk-space@main
with:
# all of these default to true, but feel free to set to "false" if necessary for your workflow
android: true
dotnet: true
haskell: true
large-packages: true
docker-images: true
swap-storage: false # Important, or the runner may be shut down due to memory starvation.
- name: Clone Repository (Latest)
uses: actions/checkout@v4
if: github.event.inputs.git-ref == ''
with:
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
submodules: recursive
- name: Clone Repository (Custom Ref)
uses: actions/checkout@v4
if: github.event.inputs.git-ref != ''
with:
ref: ${{ github.event.inputs.git-ref }}
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
submodules: recursive
- name: Miscellaneous setup
run: bash .github/scripts/misc_setup
- name: Clone MatCUTEst
uses: actions/checkout@v4
with:
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
repository: matcutest/matcutest_compiled
path: matcutest
- name: Set up gfortran on Linux
if: startsWith(matrix.os, 'ubuntu')
uses: fortran-lang/setup-fortran@main
with:
compiler: gcc
version: ${{ env.GFORTRAN_VERSION }}
- name: Check gfortran version on Linux
if: startsWith(matrix.os, 'ubuntu')
run: which gfortran && gfortran --version
- name: Install epstopdf and ghostscript
if: startsWith(matrix.os, 'ubuntu')
run: bash .github/scripts/install_epstopdf && bash .github/scripts/install_ghostscript
- name: Check MATLAB
id: check_matlab
run: if type 'matlab' &> /dev/null ; then echo "::set-output name=has_matlab::true" ; fi
- name: Set up MATLAB with optimization toolbox
if: ${{ steps.check_matlab.outputs.has_matlab != 'true' }}
uses: matlab-actions/setup-matlab@v2.2.0
with:
release: ${{ matrix.matlab }}
cache: true
products: Optimization_Toolbox Parallel_Computing_Toolbox
- name: Revise the Fortran code to break infnan
run: |
mv fortran/tests/testsuite/inf.F90 fortran/common/ && cat fortran/common/inf.F90
mv fortran/tests/testsuite/infnan.F90 fortran/common/ && cat fortran/common/infnan.F90
- name: Revise setup_compiler_options to print the revised mexopt file
run: |
cd matlab/tests/private || exit 1
sed -i "s|return|for ifile = 1 : length(config_files), ifile, cfile = fullfile(config_dir, config_files{ifile}) , system(['cat ', cfile]); end|" set_compiler_options.m
- name: Conduct the test
uses: matlab-actions/run-command@v2.1.1
with:
command: |
ver;
root_dir = pwd();
cd(fullfile(root_dir, 'matcutest')); install(); which macup
cd(fullfile(root_dir, 'matlab/tests'));
options = struct();
options.compiler_options = '${{ matrix.compiler_options }}';
options.debug = ~contains('${{ matrix.compiler_options }}', 'fast')
options.nr = 1; % 1 random runs for each problem
if strcmp('${{ matrix.solver }}', 'cobylal')
prof('cobyla', '${{ matrix.dim }}', 'l', '${{ matrix.competitor }}', options);
elseif strcmp('${{ matrix.solver }}', 'cobylan')
prof('cobyla', '${{ matrix.dim }}', 'n', '${{ matrix.competitor }}', options);
elseif strcmp('${{ matrix.solver }}', 'lincoa')
prof('${{ matrix.solver }}', '${{ matrix.dim }}', 'l', '${{ matrix.competitor }}', options);
elseif strcmp('${{ matrix.solver }}', 'bobyqa')
prof('${{ matrix.solver }}', '${{ matrix.dim }}', 'b', '${{ matrix.competitor }}', options);
else
prof('${{ matrix.solver }}', '${{ matrix.dim }}', '${{ matrix.competitor }}', options);
end
% Move the files to prepare for uploading artifacts
solver = '${{ env.SOLNAME }}'
cd(fullfile(cd(), 'testdata'));
files = dir([solver, '*.summary.*.pdf'])
for ifile = 1 : length(files)
file = fullfile(files(ifile).folder, files(ifile).name)
newfile = fullfile(files(ifile).folder, ['no', '_', files(ifile).name])
movefile(file, newfile);
end
movefile(fullfile(cd(), '*summary*.pdf'), ['/tmp/', solver, '_profile_prima/']);
movefile(fullfile(cd(), '*.txt'), ['/tmp/', solver, '_profile_prima/']);
files = [dir(['/tmp/', solver, '_profile_prima/*start*']); dir(['/tmp/', solver, '_profile_prima/*end*'])]
for ifile = 1 : length(files)
file = fullfile(files(ifile).folder, files(ifile).name)
newfile = fullfile(files(ifile).folder, ['no', '_', files(ifile).name])
movefile(file, newfile);
end
- name: List problems that started but did not end
# The solver got stuck when solving these problems. Investigate what happened.
if: always()
shell: bash
run: |
solver=${{ env.SOLNAME }}
cd /tmp/${solver}_profile_prima/
ls -R1 *${solver}*_start > ${solver}_prob_start
ls -R1 *${solver}*_end > ${solver}_prob_end
diff ${solver}_prob_start ${solver}_prob_end > ${solver}_stuck || :
printf "\n\n>>>>>>>>>>>>>>>>\nProblems that started but did not end:\n\n"
cat ${solver}_stuck
printf "\n<<<<<<<<<<<<<<<<\n\n"
- name: Store artifacts
uses: actions/upload-artifact@v4.3.1
if: always() # Always run even if the workflow is canceled manually or due to overtime.
with:
name: artifact-${{ matrix.solver }}-${{ matrix.dim }}-${{ matrix.competitor }}-${{ matrix.compiler_options }}
path: |
/tmp/${{ env.SOLNAME }}_profile_prima/*summary*.pdf
/tmp/${{ env.SOLNAME }}_profile_prima/*.txt
/tmp/${{ env.SOLNAME }}_profile_prima/*start*
/tmp/${{ env.SOLNAME }}_profile_prima/*end*
/tmp/${{ env.SOLNAME }}_profile_prima/*stuck*
/tmp/${{ env.SOLNAME }}_profile_prima/fort.*
- name: Remove the test data
if: always() # Always run even if the workflow is canceled manually or due to overtime.
run: rm -rf ./matlab/tests/testdata && rm -rf /tmp/${{ env.SOLNAME }}_profile_prima
# The following job check whether the tests were successful or cancelled due to timeout.
# N.B.: Remember to specify `continue-on-error: true` for the job of the tests.
check_success_timeout:
runs-on: ubuntu-latest
if: ${{ !cancelled() }}
needs: test
steps:
- name: Clone the GitHub actions scripts
uses: actions/checkout@v4
with:
repository: equipez/github_actions_scripts
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
path: scripts
- name: Check whether the tests were successful or cancelled due to timeout
run: bash scripts/check_success_timeout_big_test ${{ secrets.GITHUB_TOKEN }} ${{ github.repository }} ${{ github.run_id }}
merge_artifacts:
continue-on-error: true # As of 20240218, this action may fail if there are too many artifacts. We ignore the failure.
if: always()
runs-on: ubuntu-latest
needs: test
steps:
- name: Merge Artifacts
uses: actions/upload-artifact/merge@v4
with:
name: 00-merged-artifacts
pattern: artifact-*