pyproject.toml

[build-system]
requires = ["setuptools", "setuptools-scm"]
build-backend = "setuptools.build_meta"

[project]
name = "AngiospermTraiter"
version = "0.0.1"
readme = "README.md"
description = ""
license = {file = "LICENSE"}
authors = [{name="Raphael LaFrance", email="raphael.lafrance@gmail.com"}]
requires-python = ">=3.12"
dependencies = [
    "Jinja2",
    "beautifulsoup4",
    "ftfy",
    "lxml",
    "pandas",
    "pillow",
    "regex",
    "spacy",
    "tqdm",
]
optional-dependencies.dev = [
    "build",
    "pre-commit",
    "pre-commit-hooks",
    "ruff",
    "ruff-lsp",
]

[tool.setuptools.packages.find]
where = ["."]
include = ["angiosperm"]
namespaces = false

[project.scripts]

[tool.setuptools]
py-modules = []

[tool.ruff]
target-version = "py312"

show-fixes = true

lint.select = [
    "A",
    "ARG",
    "B",
    "BLE",
    "C4",
    "C90",
    "COM",
    "D",
    "E",
    "EM",
    "EXE",
    "F",
    "FA",
    "FBT",
    "FIX",
    "FLY",
    #"FURB",  # refurb
    "G",
    "I",
    "ICN",
    "INP",
    "INT",
    "ISC",
    #"LOG",  # flake8-logging
    "N",
    "NPY",
    "PD",
    "PERF",
    "PGH",
    "PIE",
    "PL",
    "PT",
    "PTH",
    "PYI",
    "Q",
    "RET",
    "RSE",
    "RUF",
    "S",
    "SIM",
    "SLF",
    "SLOT",
    "T10",
    "T20",
    "TCH",
    "TD",
    "TID",
    "TRY",
    "UP",
    "W",
]

lint.ignore = [
    "A003",  # Class attribute is shadowing a Python builtin
    "COM812",  # Trailing comma missing
    "D100",  # Missing docstring in public module
    "D101",  # Missing docstring in public class
    "D102",  # Missing docstring in public method
    "D103",  # Missing docstring in public function
    "D104",  # Missing docstring in public package
    "D105",  # Missing docstring in public method
    "D107",  # Missing docstring in public __init__
    "D203",  # 1 blank line required before class docstring
    "D212",  # Multi-line docstring summary should start at the first line
    "FIX002",  # Line contains TO DO
    "ISC001",  # Implicitly concatenated string literals on one line
    "N818",  # Exception name {name} should be named with an Error suffix
    "PD901",  # Avoid using the generic variable name df for DataFrames
    "PLR0913",  # Too many arguments in function definition ({c_args} > {max_args})
    "PLW2901",  # Outer {outer_kind} variable {name} overwritten by inner {inner_kind} target
    "PLW0603",  # Using the global statement to update {name} is discouraged
    "PT009",  # Use a regular assert instead of unittest-style {assertion}
    "RET504",  # Unnecessary assignment to {name} before return statement
    "RUF001",  # String contains ambiguous {}. Did you mean {}?
    "RUF003",  # Comment contains ambiguous "-"
    "SIM114",  # Combine if branches using logical or operator
    "SIM117",  # Use a single with statement with multiple contexts instead of nested with statements
    "SLF001",  # Private member accessed: {access}
    "T201",  # print found
    "TD002",  # Missing author in TO DO
    "TD003",  # Missing issue link on the line following this TO DO
]