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environment.yml
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environment.yml
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name: test
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=4.5=1_gnu
- _py-xgboost-mutex=2.0=cpu_0
- biopython=1.78=py39h7f8727e_0
- blas=1.0=mkl
- blast=2.5.0=hc0b0e79_3
- boost=1.73.0=py39h06a4308_11
- bottleneck=1.3.2=py39hdd57654_1
- brotli=1.0.9=he6710b0_2
- brotlipy=0.7.0=py39h27cfd23_1003
- bzip2=1.0.8=h7b6447c_0
- ca-certificates=2022.6.15=ha878542_0
- certifi=2022.6.15=py39hf3d152e_0
- cffi=1.14.6=py39h400218f_0
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.0.3=pyhd3eb1b0_0
- cryptography=35.0.0=py39hd23ed53_0
- cycler=0.10.0=py39h06a4308_0
- dataclasses=0.8=pyh6d0b6a4_7
- dbus=1.13.18=hb2f20db_0
- expat=2.4.1=h2531618_2
- flask=2.0.2=pyhd3eb1b0_0
- fontconfig=2.13.1=h6c09931_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.11.0=h70c0345_0
- giflib=5.2.1=h7b6447c_0
- glib=2.69.1=h5202010_0
- gst-plugins-base=1.14.0=h8213a91_2
- gstreamer=1.14.0=h28cd5cc_2
- icu=58.2=he6710b0_3
- idna=3.3=pyhd3eb1b0_0
- intel-openmp=2021.4.0=h06a4308_3561
- itsdangerous=2.0.1=pyhd3eb1b0_0
- jinja2=3.0.2=pyhd3eb1b0_0
- joblib=1.1.0=pyhd3eb1b0_0
- jpeg=9d=h7f8727e_0
- kiwisolver=1.3.1=py39h2531618_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.35.1=h7274673_9
- libboost=1.73.0=h3ff78a5_11
- libffi=3.3=he6710b0_2
- libgcc-ng=9.3.0=h5101ec6_17
- libgfortran-ng=7.5.0=ha8ba4b0_17
- libgfortran4=7.5.0=ha8ba4b0_17
- libgomp=9.3.0=h5101ec6_17
- libpng=1.6.37=hbc83047_0
- libstdcxx-ng=9.3.0=hd4cf53a_17
- libtiff=4.2.0=h85742a9_0
- libuuid=1.0.3=h7f8727e_2
- libwebp=1.2.0=h89dd481_0
- libwebp-base=1.2.0=h27cfd23_0
- libxcb=1.14=h7b6447c_0
- libxgboost=1.3.3=h2531618_0
- libxml2=2.9.12=h03d6c58_0
- lz4-c=1.9.3=h295c915_1
- markupsafe=2.0.1=py39h27cfd23_0
- matplotlib=3.4.3=py39h06a4308_0
- matplotlib-base=3.4.3=py39hbbc1b5f_0
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py39h7f8727e_0
- mkl_fft=1.3.1=py39hd3c417c_0
- mkl_random=1.2.2=py39h51133e4_0
- munkres=1.1.4=py_0
- ncurses=6.3=h7f8727e_2
- numexpr=2.7.3=py39h22e1b3c_1
- numpy=1.21.2=py39h20f2e39_0
- numpy-base=1.21.2=py39h79a1101_0
- olefile=0.46=pyhd3eb1b0_0
- openssl=1.1.1q=h7f8727e_0
- pandas=1.3.4=py39h8c16a72_0
- pcre=8.45=h295c915_0
- pip=21.2.4=py39h06a4308_0
- py-boost=1.73.0=py39ha9443f7_11
- py-xgboost=1.3.3=py39h06a4308_0
- pycparser=2.21=pyhd3eb1b0_0
- pyopenssl=21.0.0=pyhd3eb1b0_1
- pyparsing=3.0.4=pyhd3eb1b0_0
- pyqt=5.9.2=py39h2531618_6
- pysocks=1.7.1=py39h06a4308_0
- python=3.9.7=h12debd9_1
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python_abi=3.9=2_cp39
- pytz=2021.3=pyhd3eb1b0_0
- qt=5.9.7=h5867ecd_1
- readline=8.1=h27cfd23_0
- regex=2021.8.3=py39h7f8727e_0
- requests=2.26.0=pyhd3eb1b0_0
- scikit-learn=0.24.2=py39ha9443f7_0
- scipy=1.7.1=py39h292c36d_2
- seaborn=0.11.2=pyhd3eb1b0_0
- setuptools=58.0.4=py39h06a4308_0
- sip=4.19.13=py39h2531618_0
- six=1.16.0=pyhd3eb1b0_0
- sqlite=3.36.0=hc218d9a_0
- threadpoolctl=2.2.0=pyh0d69192_0
- tk=8.6.11=h1ccaba5_0
- tornado=6.1=py39h27cfd23_0
- tqdm=4.62.3=pyhd3eb1b0_1
- tzdata=2021e=hda174b7_0
- uritools=4.0.0=pyhd8ed1ab_0
- urllib3=1.26.7=pyhd3eb1b0_0
- werkzeug=2.0.2=pyhd3eb1b0_0
- wheel=0.37.0=pyhd3eb1b0_1
- xgboost=1.3.3=py39h06a4308_0
- xz=5.2.5=h7b6447c_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.4.9=haebb681_0
- pip:
- fair-esm==0.4.0
- pillow==8.4.0
- torch==1.10.0
- torchaudio==0.10.0
- torchvision==0.11.1
- typing-extensions==4.0.0