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target remains outdated if .id does not start with a character #1147

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matthiasgomolka opened this issue Jan 24, 2020 · 6 comments
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@matthiasgomolka
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matthiasgomolka commented Jan 24, 2020

Description

When I create symbols for the .id argument within map() which do not start with a character, the respective target remains outdated after a successful make(). This seems to occur whenever the created symbols are shown surrounded by . For example, when the symbol starts with an underscore. Also, in the target's name, the get replaced by .s.

Reproducible example

library(drake)

n <- 1:2
ids = rlang::syms(as.character(n))
ids
#> [[1]]
#> `1`
#> 
#> [[2]]
#> `2`

plan <- drake_plan(
    numeric_ids = target(
        rnorm(n),
        transform = map(n = !!n,
                        ids = !!ids,
                        .id = ids)
    )
)
plan
#> # A tibble: 2 x 2
#>   target          command  
#>   <chr>           <expr>   
#> 1 numeric_ids_.1. rnorm(1L)
#> 2 numeric_ids_.2. rnorm(2L)

# first run
vis_drake_graph(drake_config(plan))
make(plan)
#> target numeric_ids_.2.
#> target numeric_ids_.1.

# second run / targets are outdated even though make(plan) ran without errors
vis_drake_graph(drake_config(plan))
make(plan)
#> target numeric_ids_.2.
#> target numeric_ids_.1.

Created on 2020-01-24 by the reprex package (v0.3.0)

Session info
devtools::session_info()
#> - Session info ---------------------------------------------------------------
#>  setting  value                       
#>  version  R version 3.6.1 (2019-07-05)
#>  os       Windows 10 x64              
#>  system   x86_64, mingw32             
#>  ui       RTerm                       
#>  language (EN)                        
#>  collate  German_Germany.1252         
#>  ctype    German_Germany.1252         
#>  tz       Europe/Berlin               
#>  date     2020-01-24                  
#> 
#> - Packages -------------------------------------------------------------------
#>  package     * version date       lib source        
#>  assertthat    0.2.1   2019-03-21 [1] CRAN (R 3.5.3)
#>  backports     1.1.5   2019-10-02 [1] CRAN (R 3.5.3)
#>  base64url     1.4     2018-05-14 [1] CRAN (R 3.5.3)
#>  callr         3.3.2   2019-09-22 [1] CRAN (R 3.5.3)
#>  cli           1.1.0   2019-03-19 [1] CRAN (R 3.5.3)
#>  crayon        1.3.4   2017-09-16 [1] CRAN (R 3.5.3)
#>  desc          1.2.0   2018-05-01 [1] CRAN (R 3.5.3)
#>  devtools      2.0.2   2019-04-08 [1] CRAN (R 3.5.3)
#>  digest        0.6.22  2019-10-21 [1] CRAN (R 3.5.3)
#>  drake       * 7.9.0   2020-01-08 [1] CRAN (R 3.5.3)
#>  evaluate      0.14    2019-05-28 [1] CRAN (R 3.5.3)
#>  fansi         0.4.0   2018-10-05 [1] CRAN (R 3.5.3)
#>  filelock      1.0.2   2018-10-05 [1] CRAN (R 3.5.3)
#>  fs            1.3.1   2019-05-06 [1] CRAN (R 3.5.3)
#>  glue          1.3.1   2019-03-12 [1] CRAN (R 3.5.3)
#>  highr         0.8     2019-03-20 [1] CRAN (R 3.5.3)
#>  htmltools     0.4.0   2019-10-04 [1] CRAN (R 3.5.3)
#>  igraph        1.2.4.1 2019-04-22 [1] CRAN (R 3.5.3)
#>  knitr         1.26    2019-11-12 [1] CRAN (R 3.5.3)
#>  magrittr      1.5     2014-11-22 [1] CRAN (R 3.5.3)
#>  memoise       1.1.0   2017-04-21 [1] CRAN (R 3.5.3)
#>  pillar        1.4.2   2019-06-29 [1] CRAN (R 3.5.3)
#>  pkgbuild      1.0.3   2019-03-20 [1] CRAN (R 3.5.3)
#>  pkgconfig     2.0.3   2019-09-22 [1] CRAN (R 3.5.3)
#>  pkgload       1.0.2   2018-10-29 [1] CRAN (R 3.5.3)
#>  prettyunits   1.0.2   2015-07-13 [1] CRAN (R 3.5.3)
#>  processx      3.4.1   2019-07-18 [1] CRAN (R 3.5.3)
#>  ps            1.3.0   2018-12-21 [1] CRAN (R 3.5.3)
#>  R6            2.4.1   2019-11-12 [1] CRAN (R 3.5.3)
#>  Rcpp          1.0.3   2019-11-08 [1] CRAN (R 3.5.3)
#>  remotes       2.0.4   2019-04-10 [1] CRAN (R 3.5.3)
#>  rlang         0.4.2   2019-11-23 [1] CRAN (R 3.5.3)
#>  rmarkdown     2.1     2020-01-20 [1] CRAN (R 3.6.2)
#>  rprojroot     1.3-2   2018-01-03 [1] CRAN (R 3.5.3)
#>  sessioninfo   1.1.1   2018-11-05 [1] CRAN (R 3.5.3)
#>  storr         1.2.1   2018-10-18 [1] CRAN (R 3.5.3)
#>  stringi       1.4.3   2019-03-12 [1] CRAN (R 3.5.3)
#>  stringr       1.4.0   2019-02-10 [1] CRAN (R 3.5.3)
#>  testthat      2.2.1   2019-07-25 [1] CRAN (R 3.5.3)
#>  tibble        2.1.3   2019-06-06 [1] CRAN (R 3.5.3)
#>  txtq          0.2.0   2019-10-15 [1] CRAN (R 3.5.3)
#>  usethis       1.5.0   2019-04-07 [1] CRAN (R 3.5.3)
#>  utf8          1.1.4   2018-05-24 [1] CRAN (R 3.5.3)
#>  vctrs         0.2.0   2019-07-05 [1] CRAN (R 3.5.3)
#>  withr         2.1.2   2018-03-15 [1] CRAN (R 3.5.3)
#>  xfun          0.11    2019-11-12 [1] CRAN (R 3.5.3)
#>  yaml          2.2.0   2018-07-25 [1] CRAN (R 3.5.3)
#>  zeallot       0.1.0   2018-01-28 [1] CRAN (R 3.5.3)
#> 
#> [1] C:/Program Files/R/library

Expected result

Ideally, it should not matter how the symbols used in .id look like.

@matthiasgomolka
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My apologies for the not ideal formatting. At work, I only have Edge which is not fully supported by GitHub.

@wlandau
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wlandau commented Jan 24, 2020

I cannot reproduce what you see on Mac or Linux (R 3.6.0). Seems odd that Windows or the version of R would make a difference.

library(drake)

n <- seq_len(2)
ids <- rlang::syms(as.character(n))

plan <- drake_plan(
  numeric_ids = target(
    rnorm(n),
    transform = map(
      n = !!n,
      ids = !!ids,
      .id = ids
    )
  )
)

make(plan)
#> target numeric_ids_.2.
#> target numeric_ids_.1.

make(plan)
#> All targets are already up to date.

Created on 2020-01-24 by the reprex package (v0.3.0)

Session info
devtools::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value                       
#>  version  R version 3.6.1 (2019-07-05)
#>  os       macOS Mojave 10.14.6        
#>  system   x86_64, darwin15.6.0        
#>  ui       X11                         
#>  language (EN)                        
#>  collate  en_US.UTF-8                 
#>  ctype    en_US.UTF-8                 
#>  tz       America/Indiana/Indianapolis
#>  date     2020-01-24                  
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version    date       lib source                              
#>  assertthat    0.2.1      2019-03-21 [1] CRAN (R 3.6.0)                      
#>  backports     1.1.5      2019-10-02 [1] CRAN (R 3.6.1)                      
#>  base64url     1.4        2019-05-19 [1] Github (mllg/base64url@d76b9b4)     
#>  callr         3.4.0      2019-12-09 [1] CRAN (R 3.6.0)                      
#>  cli           2.0.1      2020-01-08 [1] CRAN (R 3.6.0)                      
#>  crayon        1.3.4      2017-09-16 [1] CRAN (R 3.6.0)                      
#>  desc          1.2.0      2019-08-19 [1] Github (r-lib/desc@c860e7b)         
#>  devtools      2.2.1      2019-09-24 [1] CRAN (R 3.6.0)                      
#>  digest        0.6.23.2   2020-01-03 [1] Github (eddelbuettel/digest@199be2e)
#>  drake       * 7.9.0      2020-01-08 [1] CRAN (R 3.6.0)                      
#>  ellipsis      0.3.0      2019-09-20 [1] CRAN (R 3.6.0)                      
#>  evaluate      0.14       2019-05-28 [1] CRAN (R 3.6.0)                      
#>  fansi         0.4.1      2020-01-08 [1] CRAN (R 3.6.0)                      
#>  filelock      1.0.2      2018-10-05 [1] CRAN (R 3.6.0)                      
#>  fs            1.3.1      2019-05-06 [1] CRAN (R 3.6.0)                      
#>  glue          1.3.1      2019-03-12 [1] CRAN (R 3.6.0)                      
#>  highr         0.8        2019-03-20 [1] CRAN (R 3.6.0)                      
#>  htmltools     0.4.0      2019-10-04 [1] CRAN (R 3.6.0)                      
#>  igraph        1.2.4.2    2019-11-27 [1] CRAN (R 3.6.0)                      
#>  knitr         1.27       2020-01-16 [1] CRAN (R 3.6.0)                      
#>  magrittr      1.5        2014-11-22 [1] CRAN (R 3.6.0)                      
#>  memoise       1.1.0      2017-04-21 [1] CRAN (R 3.6.0)                      
#>  pillar        1.4.3      2019-12-20 [1] CRAN (R 3.6.0)                      
#>  pkgbuild      1.0.6      2019-10-09 [1] CRAN (R 3.6.0)                      
#>  pkgconfig     2.0.3      2019-09-22 [1] CRAN (R 3.6.1)                      
#>  pkgload       1.0.2      2018-10-29 [1] CRAN (R 3.6.0)                      
#>  prettyunits   1.1.0      2020-01-09 [1] CRAN (R 3.6.1)                      
#>  processx      3.4.1      2019-07-18 [1] CRAN (R 3.6.0)                      
#>  ps            1.3.0      2018-12-21 [1] CRAN (R 3.6.0)                      
#>  R6            2.4.1      2019-11-12 [1] CRAN (R 3.6.1)                      
#>  Rcpp          1.0.3      2019-11-08 [1] CRAN (R 3.6.0)                      
#>  remotes       2.1.0      2019-06-24 [1] CRAN (R 3.6.0)                      
#>  rlang         0.4.2      2019-11-23 [1] CRAN (R 3.6.0)                      
#>  rmarkdown     2.1        2020-01-20 [1] CRAN (R 3.6.1)                      
#>  rprojroot     1.3-2      2018-01-03 [1] CRAN (R 3.6.0)                      
#>  sessioninfo   1.1.1      2018-11-05 [1] CRAN (R 3.6.0)                      
#>  storr         1.2.1      2018-10-18 [1] CRAN (R 3.6.0)                      
#>  stringi       1.4.5      2020-01-11 [1] CRAN (R 3.6.0)                      
#>  stringr       1.4.0      2019-02-10 [1] CRAN (R 3.6.0)                      
#>  testthat      2.3.1      2019-12-01 [1] CRAN (R 3.6.0)                      
#>  tibble        2.1.3      2019-06-06 [1] CRAN (R 3.6.0)                      
#>  txtq          0.2.0.9000 2019-12-05 [1] local                               
#>  usethis       1.5.1.9000 2019-08-12 [1] Github (r-lib/usethis@b241420)      
#>  vctrs         0.2.1      2019-12-17 [1] CRAN (R 3.6.1)                      
#>  withr         2.1.2      2018-03-15 [1] CRAN (R 3.6.0)                      
#>  xfun          0.12       2020-01-13 [1] CRAN (R 3.6.0)                      
#>  yaml          2.2.0      2018-07-25 [1] CRAN (R 3.6.0)                      
#>  zeallot       0.1.0      2018-01-28 [1] CRAN (R 3.6.0)                      
#> 
#> [1] /Library/Frameworks/R.framework/Versions/3.6/Resources/library

@wlandau
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wlandau commented Jan 24, 2020

This probably got lost in the comment above: would you investigate with cached() and deps_profile()?

library(drake)

n <- seq_len(2)
ids <- rlang::syms(as.character(n))

plan <- drake_plan(
  numeric_ids = target(
    rnorm(n),
    transform = map(
      n = !!n,
      ids = !!ids,
      .id = ids
    )
  )
)

make(plan)
#> target numeric_ids_.2.
#> target numeric_ids_.1.

make(plan)
#> All targets are already up to date.

config <- drake_config(plan)

cached() # numeric_ids_.1. should be there.
#> [1] "numeric_ids_.1." "numeric_ids_.2."

# The `changed` column should be all FALSE.
deps_profile(numeric_ids_.1., config)
#> # A tibble: 5 x 4
#>   name     changed old                new               
#>   <chr>    <lgl>   <chr>              <chr>             
#> 1 command  FALSE   "5a074681f8dfbea9" "5a074681f8dfbea9"
#> 2 depend   FALSE   ""                 ""                
#> 3 file_in  FALSE   ""                 ""                
#> 4 file_out FALSE   ""                 ""                
#> 5 seed     FALSE   "39546070"         "39546070"

Created on 2020-01-24 by the reprex package (v0.3.0)

Session info
devtools::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value                       
#>  version  R version 3.6.1 (2019-07-05)
#>  os       macOS Mojave 10.14.6        
#>  system   x86_64, darwin15.6.0        
#>  ui       X11                         
#>  language (EN)                        
#>  collate  en_US.UTF-8                 
#>  ctype    en_US.UTF-8                 
#>  tz       America/Indiana/Indianapolis
#>  date     2020-01-24                  
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version    date       lib source                              
#>  assertthat    0.2.1      2019-03-21 [1] CRAN (R 3.6.0)                      
#>  backports     1.1.5      2019-10-02 [1] CRAN (R 3.6.1)                      
#>  base64url     1.4        2019-05-19 [1] Github (mllg/base64url@d76b9b4)     
#>  callr         3.4.0      2019-12-09 [1] CRAN (R 3.6.0)                      
#>  cli           2.0.1      2020-01-08 [1] CRAN (R 3.6.0)                      
#>  crayon        1.3.4      2017-09-16 [1] CRAN (R 3.6.0)                      
#>  desc          1.2.0      2019-08-19 [1] Github (r-lib/desc@c860e7b)         
#>  devtools      2.2.1      2019-09-24 [1] CRAN (R 3.6.0)                      
#>  digest        0.6.23.2   2020-01-03 [1] Github (eddelbuettel/digest@199be2e)
#>  drake       * 7.9.0      2020-01-08 [1] CRAN (R 3.6.0)                      
#>  ellipsis      0.3.0      2019-09-20 [1] CRAN (R 3.6.0)                      
#>  evaluate      0.14       2019-05-28 [1] CRAN (R 3.6.0)                      
#>  fansi         0.4.1      2020-01-08 [1] CRAN (R 3.6.0)                      
#>  filelock      1.0.2      2018-10-05 [1] CRAN (R 3.6.0)                      
#>  fs            1.3.1      2019-05-06 [1] CRAN (R 3.6.0)                      
#>  glue          1.3.1      2019-03-12 [1] CRAN (R 3.6.0)                      
#>  highr         0.8        2019-03-20 [1] CRAN (R 3.6.0)                      
#>  htmltools     0.4.0      2019-10-04 [1] CRAN (R 3.6.0)                      
#>  igraph        1.2.4.2    2019-11-27 [1] CRAN (R 3.6.0)                      
#>  knitr         1.27       2020-01-16 [1] CRAN (R 3.6.0)                      
#>  magrittr      1.5        2014-11-22 [1] CRAN (R 3.6.0)                      
#>  memoise       1.1.0      2017-04-21 [1] CRAN (R 3.6.0)                      
#>  pillar        1.4.3      2019-12-20 [1] CRAN (R 3.6.0)                      
#>  pkgbuild      1.0.6      2019-10-09 [1] CRAN (R 3.6.0)                      
#>  pkgconfig     2.0.3      2019-09-22 [1] CRAN (R 3.6.1)                      
#>  pkgload       1.0.2      2018-10-29 [1] CRAN (R 3.6.0)                      
#>  prettyunits   1.1.0      2020-01-09 [1] CRAN (R 3.6.1)                      
#>  processx      3.4.1      2019-07-18 [1] CRAN (R 3.6.0)                      
#>  ps            1.3.0      2018-12-21 [1] CRAN (R 3.6.0)                      
#>  R6            2.4.1      2019-11-12 [1] CRAN (R 3.6.1)                      
#>  Rcpp          1.0.3      2019-11-08 [1] CRAN (R 3.6.0)                      
#>  remotes       2.1.0      2019-06-24 [1] CRAN (R 3.6.0)                      
#>  rlang         0.4.2      2019-11-23 [1] CRAN (R 3.6.0)                      
#>  rmarkdown     2.1        2020-01-20 [1] CRAN (R 3.6.1)                      
#>  rprojroot     1.3-2      2018-01-03 [1] CRAN (R 3.6.0)                      
#>  sessioninfo   1.1.1      2018-11-05 [1] CRAN (R 3.6.0)                      
#>  storr         1.2.1      2018-10-18 [1] CRAN (R 3.6.0)                      
#>  stringi       1.4.5      2020-01-11 [1] CRAN (R 3.6.0)                      
#>  stringr       1.4.0      2019-02-10 [1] CRAN (R 3.6.0)                      
#>  testthat      2.3.1      2019-12-01 [1] CRAN (R 3.6.0)                      
#>  tibble        2.1.3      2019-06-06 [1] CRAN (R 3.6.0)                      
#>  txtq          0.2.0.9000 2019-12-05 [1] local                               
#>  usethis       1.5.1.9000 2019-08-12 [1] Github (r-lib/usethis@b241420)      
#>  utf8          1.1.4      2018-05-24 [1] CRAN (R 3.6.0)                      
#>  vctrs         0.2.1      2019-12-17 [1] CRAN (R 3.6.1)                      
#>  withr         2.1.2      2018-03-15 [1] CRAN (R 3.6.0)                      
#>  xfun          0.12       2020-01-13 [1] CRAN (R 3.6.0)                      
#>  yaml          2.2.0      2018-07-25 [1] CRAN (R 3.6.0)                      
#>  zeallot       0.1.0      2018-01-28 [1] CRAN (R 3.6.0)                      
#> 
#> [1] /Library/Frameworks/R.framework/Versions/3.6/Resources/library

@wlandau
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wlandau commented Jan 25, 2020

Reproduced on Windows. Strange that this is an OS-specific issue.

library(drake)

packageVersion("drake")
#> [1] '7.9.0.9000'

n <- seq_len(2)
ids <- rlang::syms(as.character(n))

plan <- drake_plan(
  numeric_ids = target(
    rnorm(n),
    transform = map(
      n = !!n,
      ids = !!ids,
      .id = ids
    )
  )
)

make(plan)
#> target numeric_ids_.2.
#> target numeric_ids_.1.

make(plan)
#> target numeric_ids_.2.
#> target numeric_ids_.1.

Created on 2020-01-25 by the reprex package (v0.3.0)

Session info
devtools::session_info()
#> - Session info ---------------------------------------------------------------
#>  setting  value                       
#>  version  R version 3.6.1 (2019-07-05)
#>  os       Windows 10 x64              
#>  system   x86_64, mingw32             
#>  ui       RTerm                       
#>  language (EN)                        
#>  collate  English_United States.1252  
#>  ctype    English_United States.1252  
#>  tz       America/New_York            
#>  date     2020-01-25                  
#> 
#> - Packages -------------------------------------------------------------------
#>  package     * version    date       lib source                              
#>  assertthat    0.2.1      2019-03-21 [1] CRAN (R 3.6.1)                      
#>  backports     1.1.5      2019-10-02 [1] CRAN (R 3.6.1)                      
#>  base64url     1.4        2018-05-14 [1] CRAN (R 3.6.1)                      
#>  callr         3.4.1      2020-01-24 [1] CRAN (R 3.6.1)                      
#>  cli           2.0.1      2020-01-08 [1] CRAN (R 3.6.2)                      
#>  crayon        1.3.4      2017-09-16 [1] CRAN (R 3.6.1)                      
#>  desc          1.2.0      2018-05-01 [1] CRAN (R 3.6.1)                      
#>  devtools      2.2.1      2019-09-24 [1] CRAN (R 3.6.1)                      
#>  digest        0.6.23     2019-12-08 [1] Github (eddelbuettel/digest@c08d77f)
#>  drake       * 7.9.0.9000 2020-01-25 [1] local                               
#>  ellipsis      0.3.0      2019-09-20 [1] CRAN (R 3.6.1)                      
#>  evaluate      0.14       2019-05-28 [1] CRAN (R 3.6.1)                      
#>  fansi         0.4.1      2020-01-08 [1] CRAN (R 3.6.2)                      
#>  filelock      1.0.2      2018-10-05 [1] CRAN (R 3.6.1)                      
#>  fs            1.3.1      2019-05-06 [1] CRAN (R 3.6.1)                      
#>  glue          1.3.1      2019-03-12 [1] CRAN (R 3.6.1)                      
#>  highr         0.8        2019-03-20 [1] CRAN (R 3.6.1)                      
#>  htmltools     0.4.0      2019-10-04 [1] CRAN (R 3.6.1)                      
#>  igraph        1.2.4.2    2019-11-27 [1] CRAN (R 3.6.1)                      
#>  knitr         1.27       2020-01-16 [1] CRAN (R 3.6.2)                      
#>  magrittr      1.5        2014-11-22 [1] CRAN (R 3.6.1)                      
#>  memoise       1.1.0      2017-04-21 [1] CRAN (R 3.6.1)                      
#>  pillar        1.4.3      2019-12-20 [1] CRAN (R 3.6.2)                      
#>  pkgbuild      1.0.6      2019-10-09 [1] CRAN (R 3.6.1)                      
#>  pkgconfig     2.0.3      2019-09-22 [1] CRAN (R 3.6.1)                      
#>  pkgload       1.0.2      2018-10-29 [1] CRAN (R 3.6.1)                      
#>  prettyunits   1.1.1      2020-01-24 [1] CRAN (R 3.6.1)                      
#>  processx      3.4.1      2019-07-18 [1] CRAN (R 3.6.1)                      
#>  ps            1.3.0      2018-12-21 [1] CRAN (R 3.6.1)                      
#>  R6            2.4.1      2019-11-12 [1] CRAN (R 3.6.1)                      
#>  Rcpp          1.0.3      2019-11-08 [1] CRAN (R 3.6.1)                      
#>  remotes       2.1.0      2019-06-24 [1] CRAN (R 3.6.1)                      
#>  rlang         0.4.3      2020-01-24 [1] CRAN (R 3.6.1)                      
#>  rmarkdown     2.1        2020-01-20 [1] CRAN (R 3.6.2)                      
#>  rprojroot     1.3-2      2018-01-03 [1] CRAN (R 3.6.1)                      
#>  sessioninfo   1.1.1      2018-11-05 [1] CRAN (R 3.6.1)                      
#>  storr         1.2.2      2019-12-03 [1] local                               
#>  stringi       1.4.5      2020-01-11 [1] CRAN (R 3.6.1)                      
#>  stringr       1.4.0      2019-02-10 [1] CRAN (R 3.6.1)                      
#>  testthat      2.3.1      2019-12-01 [1] CRAN (R 3.6.1)                      
#>  tibble        2.1.3      2019-06-06 [1] CRAN (R 3.6.1)                      
#>  txtq          0.2.0      2019-10-15 [1] CRAN (R 3.6.1)                      
#>  usethis       1.5.1      2019-07-04 [1] CRAN (R 3.6.1)                      
#>  vctrs         0.2.2      2020-01-24 [1] CRAN (R 3.6.1)                      
#>  withr         2.1.2      2018-03-15 [1] CRAN (R 3.6.1)                      
#>  xfun          0.12       2020-01-13 [1] CRAN (R 3.6.2)                      
#>  yaml          2.2.0      2018-07-25 [1] CRAN (R 3.6.0)                      
#> 
#> [1] C:/R/R-3.6.1/library

@wlandau
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wlandau commented Jan 25, 2020

Fixed.

wlandau pushed a commit that referenced this issue Jan 25, 2020
@matthiasgomolka
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This was quick, thanks!

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