Skip to content
This repository has been archived by the owner on Jan 30, 2023. It is now read-only.

Commit

Permalink
Merge tag '9.7.beta8' into t/33812/refactor_distributions_sage_setup_…
Browse files Browse the repository at this point in the history
…_sagemath__objects_categories__through_sagemath__environment_repl_

SageMath version 9.7.beta8, Release Date: 2022-08-07
  • Loading branch information
Matthias Koeppe committed Aug 22, 2022
2 parents 1fe31c8 + 12be2d9 commit 9fd5817
Show file tree
Hide file tree
Showing 681 changed files with 7,026 additions and 4,847 deletions.
81 changes: 81 additions & 0 deletions .github/workflows/ci-linux.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,81 @@
name: CI Linux

## This GitHub Actions workflow runs SAGE_ROOT/tox.ini with select environments,
## whenever a GitHub pull request is opened or synchronized in a repository
## where GitHub Actions are enabled.
##
## It builds and checks some sage spkgs as defined in TARGETS.
##
## A job succeeds if there is no error.
##
## The build is run with "make V=0", so the build logs of individual packages are suppressed.
##
## At the end, all package build logs that contain an error are printed out.
##
## After all jobs have finished (or are canceled) and a short delay,
## tar files of all logs are made available as "build artifacts".

#on: [push, pull_request]

on:
pull_request:
types: [opened, synchronize]
push:
tags:
- '*'
workflow_dispatch:
# Allow to run manually

env:
TARGETS_PRE: all-sage-local
TARGETS: build doc-html
TARGETS_OPTIONAL: ptest

jobs:

docker:
uses: ./.github/workflows/docker.yml
with:
# FIXME: duplicated from env.TARGETS
targets_pre: all-sage-local
targets: build doc-html
targets_optional: ptest
docker_push_repository: ghcr.io/${{ github.repository }}/

local-ubuntu:

runs-on: ubuntu-latest
strategy:
fail-fast: false
max-parallel: 1
matrix:
tox_system_factor: [conda-forge-ubuntu]
tox_packages_factor: [minimal, standard, environment, environment-optional]
env:
TOX_ENV: local-${{ matrix.tox_system_factor }}-${{ matrix.tox_packages_factor }}
LOGS_ARTIFACT_NAME: logs-commit-${{ github.sha }}-tox-local-${{ matrix.tox_system_factor }}-${{ matrix.tox_packages_factor }}
steps:
- uses: actions/checkout@v2
- name: Install test prerequisites
run: |
sudo DEBIAN_FRONTEND=noninteractive apt-get update
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
- name: Build and test with tox
# We use a high parallelization on purpose in order to catch possible parallelization bugs in the build scripts.
# For doctesting, we use a lower parallelization to avoid timeouts.
run: |
MAKE="make -j12" tox -e $TOX_ENV -- SAGE_NUM_THREADS=4 $TARGETS
- name: Prepare logs artifact
run: |
mkdir -p "artifacts/$LOGS_ARTIFACT_NAME"; cp -r .tox/*/log "artifacts/$LOGS_ARTIFACT_NAME"
if: always()
- uses: actions/upload-artifact@v1
with:
path: artifacts
name: ${{ env.LOGS_ARTIFACT_NAME }}
if: always()
- name: Print out logs for immediate inspection
# and markup the output with GitHub Actions logging commands
run: |
.github/workflows/scan-logs.sh "artifacts/$LOGS_ARTIFACT_NAME"
if: always()
3 changes: 2 additions & 1 deletion .github/workflows/doc-build.yml
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,10 @@ jobs:

- name: Prepare
run: |
# Reuse built SAGE_LOCAL contained in the Docker image
# Reuse built SAGE_LOCAL contained in the Docker image
./bootstrap
./configure --enable-build-as-root --prefix=/sage/local --with-sage-venv --enable-download-from-upstream-url
make furo
- name: Build
run: make doc-html
Expand Down
216 changes: 216 additions & 0 deletions .github/workflows/docker.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,216 @@
name: Reusable workflow for Docker-based portability CI

on:
workflow_call:
inputs:
targets_pre:
default: build/make/Makefile
type: string
targets:
default: build/make/Makefile
type: string
targets_optional:
default: build/make/Makefile
type: string
tox_system_factors:
description: 'Stringified JSON object listing tox system factors'
type: string
default: >-
["ubuntu-trusty-toolchain-gcc_9",
"ubuntu-xenial-toolchain-gcc_9",
"ubuntu-bionic",
"ubuntu-focal",
"ubuntu-jammy",
"ubuntu-kinetic",
"debian-stretch",
"debian-buster",
"debian-bullseye",
"debian-bookworm",
"debian-sid",
"linuxmint-19",
"linuxmint-19.3",
"linuxmint-20.1",
"linuxmint-20.2",
"linuxmint-20.3",
"linuxmint-21",
"fedora-26",
"fedora-27",
"fedora-28",
"fedora-29",
"fedora-30",
"fedora-31",
"fedora-32",
"fedora-33",
"fedora-34",
"fedora-35",
"fedora-36",
"fedora-37",
"centos-7-devtoolset-gcc_11",
"centos-stream-8",
"centos-stream-9",
"gentoo-python3.9",
"gentoo-python3.10",
"archlinux-latest",
"opensuse-15.3",
"opensuse-15.4",
"opensuse-tumbleweed",
"conda-forge",
"ubuntu-bionic-i386",
"manylinux-2_24-i686",
"debian-buster-i386",
]
tox_packages_factors:
description: 'Stringified JSON object listing tox packages factors'
type: string
default: >-
["minimal",
"standard",
]
max_parallel:
type: number
default: 20
#
# Publishing to GitHub Packages
#
docker_push_repository:
required: false
type: string
#
# For use in upstream CIs
#
upstream_artifact:
required: false
type: string
sage_repo:
required: false
type: string
sage_trac_git:
required: false
type: string
sage_trac_ticket:
required: false
type: string
sage_ref:
required: false
type: string

jobs:
linux:
runs-on: ubuntu-latest
strategy:
fail-fast: false
max-parallel: ${{ inputs.max_parallel }}
matrix:
tox_system_factor: ${{ fromJson(inputs.tox_system_factors) }}
tox_packages_factor: ${{ fromJson(inputs.tox_packages_factors) }}
env:
TOX_ENV: docker-${{ matrix.tox_system_factor }}-${{ matrix.tox_packages_factor }}
LOGS_ARTIFACT_NAME: logs-commit-${{ github.sha }}-tox-docker-${{ matrix.tox_system_factor }}-${{ matrix.tox_packages_factor }}
DOCKER_TARGETS: with-system-packages configured with-targets-pre with-targets with-targets-optional
TARGETS_PRE: ${{ inputs.targets_pre }}
TARGETS: ${{ inputs.targets }}
TARGETS_OPTIONAL: ${{ inputs.targets_optional }}
steps:
- name: Check out SageMath
uses: actions/checkout@v2
with:
repository: ${{ inputs.sage_repo }}
ref: ${{ inputs.sage_ref }}
fetch-depth: 2000
- name: fetch tags
run: git fetch --depth=1 origin +refs/tags/*:refs/tags/*
- name: free disk space
run: |
df -h
sudo swapoff -a
sudo rm -f /swapfile
sudo apt-get clean
docker rmi $(docker image ls -aq)
echo "Largest packages:"
dpkg-query -Wf '${Installed-Size}\t${Package}\n' | sort -n | tail -n 50
sudo apt-get --fix-broken --yes remove $(dpkg-query -f '${Package}\n' -W | grep -E '^(ghc-|google-cloud-sdk|google-chrome|firefox|mysql-server|dotnet-sdk|hhvm|mono)') || echo "(error ignored)"
df -h
- name: Check out git-trac-command
uses: actions/checkout@v2
with:
repository: sagemath/git-trac-command
path: git-trac-command
if: inputs.sage_trac_git != ''
- name: Check out SageMath from trac.sagemath.org
shell: bash {0}
# Random sleep and retry to limit the load on trac.sagemath.org
run: |
git config --global user.email "ci-sage@example.com"
git config --global user.name "ci-sage workflow"
if [ ! -d .git ]; then git init; fi; git remote add trac ${{ inputs.sage_trac_git }} && x=1 && while [ $x -le 5 ]; do x=$(( $x + 1 )); sleep $(( $RANDOM % 60 + 1 )); if git-trac-command/git-trac fetch ${{ inputs.sage_trac_ticket }}; then git merge FETCH_HEAD || echo "(ignored)"; exit 0; fi; sleep 40; done; exit 1
if: inputs.sage_trac_git != ''

- name: Download upstream artifact
uses: actions/download-artifact@v2
with:
path: upstream
name: ${{ inputs.upstream_artifact }}
if: inputs.upstream_artifact
- name: Install test prerequisites
run: |
sudo DEBIAN_FRONTEND=noninteractive apt-get update
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Update Sage packages from upstream artifact
run: |
(export PATH=$(pwd)/build/bin:$PATH; (cd upstream && bash -x update-pkgs.sh) && sed -i.bak '/upstream/d' .dockerignore && echo "/:toolchain:/i ADD upstream upstream" | sed -i.bak -f - build/bin/write-dockerfile.sh && git diff)
if: inputs.upstream_artifact

- name: Try to login to ghcr.io
if: inputs.docker_push_repository != ''
# https://docs.github.com/en/actions/reference/workflow-commands-for-github-actions#setting-an-environment-variable
run: |
TOKEN="${{ secrets.DOCKER_PKG_GITHUB_TOKEN }}"
if [ -z "$TOKEN" ]; then
TOKEN="${{ secrets.GITHUB_TOKEN }}"
fi
if echo "$TOKEN" | docker login ghcr.io -u ${{ github.actor }} --password-stdin; then
echo "DOCKER_PUSH_REPOSITORY=${{ inputs.docker_push_repository }}" >> $GITHUB_ENV
echo "DOCKER_CONFIG_FILE=$HOME/.docker/config.json" >> $GITHUB_ENV
fi
# From the docker documentation via .ci/update-env.sh:
# "A tag name must be valid ASCII and may
# contain lowercase and uppercase letters, digits, underscores, periods and
# dashes. A tag name may not start with a period or a dash and may contain a
# maximum of 128 characters."
EXTRA_DOCKER_TAGS=`echo $GITHUB_REF_NAME | tr -d '[:space:]' | tr -c '[:alnum:]_.-' '-' | sed 's/^[-.]*//' | cut -c1-128`
shopt -s extglob
case "$GITHUB_REF_NAME" in
+([0-9]).+([0-9])?(.+([0-9])) )
EXTRA_DOCKER_TAGS="latest dev $EXTRA_DOCKER_TAGS";;
+([0-9]).+([0-9])?(.+([0-9]))?(.)@(a|alpha|b|beta|rc)+([0-9]) )
EXTRA_DOCKER_TAGS="dev $EXTRA_DOCKER_TAGS";;
esac
echo "EXTRA_DOCKER_TAGS=$EXTRA_DOCKER_TAGS" >> $GITHUB_ENV
- name: Configure and build Sage distribution within a Docker container
run: |
set -o pipefail; EXTRA_DOCKER_BUILD_ARGS="--build-arg NUMPROC=4 --build-arg USE_MAKEFLAGS=\"-k V=0 SAGE_NUM_THREADS=3\"" tox -e $TOX_ENV -- $TARGETS 2>&1 | sed "/^configure: notice:/s|^|::warning file=artifacts/$LOGS_ARTIFACT_NAME/config.log::|;/^configure: warning:/s|^|::warning file=artifacts/$LOGS_ARTIFACT_NAME/config.log::|;/^configure: error:/s|^|::error file=artifacts/$LOGS_ARTIFACT_NAME/config.log::|;"
- name: Copy logs from the Docker image or build container
run: |
mkdir -p "artifacts/$LOGS_ARTIFACT_NAME"
cp -r .tox/$TOX_ENV/Dockerfile .tox/$TOX_ENV/log "artifacts/$LOGS_ARTIFACT_NAME"
if [ -f .tox/$TOX_ENV/Dockertags ]; then CONTAINERS=$(docker create $(tail -1 .tox/$TOX_ENV/Dockertags) /bin/bash || true); fi
if [ -n "$CONTAINERS" ]; then for CONTAINER in $CONTAINERS; do for ARTIFACT in /sage/logs; do docker cp $CONTAINER:$ARTIFACT artifacts/$LOGS_ARTIFACT_NAME && HAVE_LOG=1; done; if [ -n "$HAVE_LOG" ]; then break; fi; done; fi
if: always()
- uses: actions/upload-artifact@v2
with:
path: artifacts
name: ${{ env.LOGS_ARTIFACT_NAME }}
if: always()
- name: Print out logs for immediate inspection
# and markup the output with GitHub Actions logging commands
run: |
.github/workflows/scan-logs.sh "artifacts/$LOGS_ARTIFACT_NAME"
if: always()
- name: List docker images
run: |
if [ -f .tox/$TOX_ENV/Dockertags ]; then
cat .tox/$TOX_ENV/Dockertags
fi
if: always()
8 changes: 4 additions & 4 deletions .github/workflows/tox-experimental.yml
Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@ jobs:
fail-fast: false
max-parallel: 6
matrix:
tox_system_factor: [gitpod, ubuntu-trusty-toolchain-gcc_9, ubuntu-xenial-toolchain-gcc_9, ubuntu-bionic, ubuntu-focal, ubuntu-hirsute, ubuntu-impish, ubuntu-jammy, ubuntu-kinetic, debian-stretch, debian-buster, debian-bullseye, debian-bookworm, debian-sid, linuxmint-19, linuxmint-19.3, linuxmint-20.1, linuxmint-20.2, linuxmint-20.3, linuxmint-21, fedora-26, fedora-27, fedora-28, fedora-29, fedora-30, fedora-31, fedora-32, fedora-33, fedora-34, fedora-35, fedora-36, fedora-37, centos-7-devtoolset-gcc_11, centos-stream-8, gentoo-python3.9, gentoo-python3.10, archlinux-latest, opensuse-15.3, opensuse-tumbleweed, conda-forge, ubuntu-bionic-i386, manylinux-2_24-i686, debian-buster-i386, centos-7-i386-devtoolset-gcc_11]
tox_system_factor: [ubuntu-trusty-toolchain-gcc_9, ubuntu-xenial-toolchain-gcc_9, ubuntu-bionic, ubuntu-focal, ubuntu-jammy, ubuntu-kinetic, debian-stretch, debian-buster, debian-bullseye, debian-bookworm, debian-sid, linuxmint-19, linuxmint-19.3, linuxmint-20.1, linuxmint-20.2, linuxmint-20.3, linuxmint-21, fedora-26, fedora-27, fedora-28, fedora-29, fedora-30, fedora-31, fedora-32, fedora-33, fedora-34, fedora-35, fedora-36, fedora-37, centos-7-devtoolset-gcc_11, centos-stream-8, gentoo-python3.9, gentoo-python3.10, archlinux-latest, opensuse-15.3, opensuse-tumbleweed, conda-forge, ubuntu-bionic-i386, manylinux-2_24-i686, debian-buster-i386, centos-7-i386-devtoolset-gcc_11]
tox_packages_factor: [maximal]
targets_pattern: [0-g, h-o, p, q-z]
env:
Expand Down Expand Up @@ -71,15 +71,15 @@ jobs:
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Try to login to docker.pkg.github.com
- name: Try to login to ghcr.io
# https://docs.github.com/en/actions/reference/workflow-commands-for-github-actions#setting-an-environment-variable
run: |
TOKEN="${{ secrets.DOCKER_PKG_GITHUB_TOKEN }}"
if [ -z "$TOKEN" ]; then
TOKEN="${{ secrets.GITHUB_TOKEN }}"
fi
if echo "$TOKEN" | docker login docker.pkg.github.com -u ${{ github.actor }} --password-stdin; then
echo "DOCKER_PUSH_REPOSITORY=docker.pkg.github.com/${{ github.repository }}/" >> $GITHUB_ENV
if echo "$TOKEN" | docker login ghcr.io -u ${{ github.actor }} --password-stdin; then
echo "DOCKER_PUSH_REPOSITORY=ghcr.io/${{ github.repository }}/" >> $GITHUB_ENV
echo "DOCKER_CONFIG_FILE=$HOME/.docker/config.json" >> $GITHUB_ENV
fi
# From the docker documentation via .ci/update-env.sh:
Expand Down
8 changes: 4 additions & 4 deletions .github/workflows/tox-optional.yml
Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@ jobs:
fail-fast: false
max-parallel: 6
matrix:
tox_system_factor: [gitpod, ubuntu-trusty-toolchain-gcc_9, ubuntu-xenial-toolchain-gcc_9, ubuntu-bionic, ubuntu-focal, ubuntu-hirsute, ubuntu-impish, ubuntu-jammy, ubuntu-kinetic, debian-stretch, debian-buster, debian-bullseye, debian-bookworm, debian-sid, linuxmint-19, linuxmint-19.3, linuxmint-20.1, linuxmint-20.2, linuxmint-20.3, linuxmint-21, fedora-26, fedora-27, fedora-28, fedora-29, fedora-30, fedora-31, fedora-32, fedora-33, fedora-34, fedora-35, fedora-36, fedora-37, centos-7-devtoolset-gcc_11, centos-stream-8, gentoo-python3.9, gentoo-python3.10, archlinux-latest, opensuse-15.3, opensuse-tumbleweed, conda-forge, ubuntu-bionic-i386, manylinux-2_24-i686, debian-buster-i386, centos-7-i386-devtoolset-gcc_11]
tox_system_factor: [ubuntu-trusty-toolchain-gcc_9, ubuntu-xenial-toolchain-gcc_9, ubuntu-bionic, ubuntu-focal, ubuntu-jammy, ubuntu-kinetic, debian-stretch, debian-buster, debian-bullseye, debian-bookworm, debian-sid, linuxmint-19, linuxmint-19.3, linuxmint-20.1, linuxmint-20.2, linuxmint-20.3, linuxmint-21, fedora-26, fedora-27, fedora-28, fedora-29, fedora-30, fedora-31, fedora-32, fedora-33, fedora-34, fedora-35, fedora-36, fedora-37, centos-7-devtoolset-gcc_11, centos-stream-8, gentoo-python3.9, gentoo-python3.10, archlinux-latest, opensuse-15.3, opensuse-tumbleweed, conda-forge, ubuntu-bionic-i386, manylinux-2_24-i686, debian-buster-i386, centos-7-i386-devtoolset-gcc_11]
tox_packages_factor: [maximal]
targets_pattern: [0-g, h-o, p, q-z]
env:
Expand Down Expand Up @@ -71,15 +71,15 @@ jobs:
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Try to login to docker.pkg.github.com
- name: Try to login to ghcr.io
# https://docs.github.com/en/actions/reference/workflow-commands-for-github-actions#setting-an-environment-variable
run: |
TOKEN="${{ secrets.DOCKER_PKG_GITHUB_TOKEN }}"
if [ -z "$TOKEN" ]; then
TOKEN="${{ secrets.GITHUB_TOKEN }}"
fi
if echo "$TOKEN" | docker login docker.pkg.github.com -u ${{ github.actor }} --password-stdin; then
echo "DOCKER_PUSH_REPOSITORY=docker.pkg.github.com/${{ github.repository }}/" >> $GITHUB_ENV
if echo "$TOKEN" | docker login ghcr.io -u ${{ github.actor }} --password-stdin; then
echo "DOCKER_PUSH_REPOSITORY=ghcr.io/${{ github.repository }}/" >> $GITHUB_ENV
echo "DOCKER_CONFIG_FILE=$HOME/.docker/config.json" >> $GITHUB_ENV
fi
# From the docker documentation via .ci/update-env.sh:
Expand Down
Loading

0 comments on commit 9fd5817

Please sign in to comment.