Releases: sanger-bentley-group/gps-pipeline
Releases · sanger-bentley-group/gps-pipeline
Dockerised Pipeline Prototype v0.3.0
Changes since v0.2.1
- Include CDC PBP AMR Predictor to provide AMR prediction related to pbp genes
- Improve offline capability
- Better support for common FASTQ naming conventions
- Improve
README.md
- Improve description
- Add credits for all open-source components
- Add details about the output
summary.csv
file
Full Changelog: v0.2.1-alpha...v0.3.0-alpha
Dockerised Pipeline Prototype v0.2.1
A working prototype of the GPS Unified Pipeline
- The pipeline now runs fully in Docker environments
- In silico AMR prediction is not yet implemented
v0.2.1 Hotfix
- Prevent permission issue with LINEAGE module
Dockerised Pipeline Prototype v0.2
A working prototype of the GPS Unified Pipeline
- The pipeline now runs fully in Docker environments
- In silico AMR prediction is not yet implemented
Predocker Pipeline Prototype v0.1
A working prototype of the GPS Unified Pipeline
- The environments are not fully dockerised
- In silico AMR prediction is not yet implemented