From 44ffe0b2ecd4f598a095f5cc8b57a825ae4028af Mon Sep 17 00:00:00 2001
From: Sara Sjunnebo <ss44@sanger.ac.uk>
Date: Wed, 28 Nov 2018 11:45:21 +0000
Subject: [PATCH] Include tests in README

---
 README.md | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/README.md b/README.md
index 7ba200c..d72a603 100644
--- a/README.md
+++ b/README.md
@@ -8,6 +8,7 @@ Takes a VCF and infers annotations and variant effects from a GFF using [SnpEff]
 ## Content
   * [Introduction](#introduction)
   * [Installation](#installation)
+    * [Running the tests](#running-the-tests)
   * [Usage](#usage)
     * [Example usage](#example-usage)
     * [Alternative coding tables](#alternative-coding-tables)
@@ -35,7 +36,12 @@ Install [snpEff](http://snpeff.sourceforge.net/) and Java 1.7 then
 ```
 pip install git+https://github.com/sanger-pathogens/SnpEffWrapper.git
 ```
+### Running the tests
+The test can be run from the top level directory:  
 
+```
+./snpEffWrapper/tests/test_wrapper.py
+```
 ## Usage
 ```
 $ snpEffBuildAndRun --help