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model.edn
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{;; plan: represent data in libs.md
;;
;; process: do it incrementally, move one section at a time.
:tags
[{:tag/id "array", :tag/description "array programming"}
{:tag/id "tensor", :tag/description "tensor programming"}
{:tag/id "linalg", :tag/description "linear algebra"}
{:tag/id "native", :tag/description "interop with native-optimized libraries"}
{:tag/id "gpu", :tag/description "gpu support"}
{:tag/id "vis", :tag/description "data visualization and visual art"}
{:tag/id "vega", :tag/description "visualization using [Vega](https://vega.github.io/vega/)/[Vega-lite](https://vega.github.io/vega-lite/) specifications"}
{:tag/id "lit", :tag/description "literate programming"}
{:tag/id "ui", :tag/description "building UIs for data exploration"}
{:tag/id "geo", :tag/description "geographical and geometrical data processing"}
{:tag/id "df", :tag/description "dataframe-like data structures and abstractions"}
{:tag/id "data", :tag/description "general data processing"}
{:tag/id "csv", :tag/description "csv import/export"}
{:tag/id "xl", :tag/description "Excel spreadsheets interaction"}
{:tag/id "json", :tag/description "json import/export"}
{:tag/id "xform", :tag/description "transducers support"}
{:tag/id "math", :tag/description "diverse math functions"}
{:tag/id "stat", :tag/description "statistics"}
{:tag/id "ts", :tag/description "time series analysis"}
{:tag/id "rand", :tag/description "simulation and random sampling"}
{:tag/id "prob", :tag/description "Bayesian computing and probabilistic programming"}
{:tag/id "ml", :tag/description "machine learning"}
{:tag/id "dnn", :tag/description "deep learning"}
{:tag/id "opt", :tag/description "optimization"}
{:tag/id "graph", :tag/description "graph algorithms and network analysis"}
{:tag/id "interop", :tag/description "general libraries for interop"}
{:tag/id "cljs", :tag/description "supports not only Clojure but also Clojurescript"}
{:tag/id "nlp", :tag/description "natural language processing"}
{:tag/id "llm", :tag/description "large language models and related services"}]
:teodorlu/questions [
;; I'm having a bit of a hard time understanding the motivation between having both the star
;; and :readiness :experimental. Does that mean /some/ of the API is considered stable, but
;; the library is still under active development, and collaboration is invited?
;;
;; Perhaps we can be even clearer on what the call to action / "job to be done" for tags :)
]
:libs
[;; # Diverse toolsets
({:lib/name "fastmath",
:lib/url "https://github.com/generateme/fastmath",
:lib/category :div-tools,
:tags #{:stat :rand :act :ml :math},
:star :star,
:description
"a collection of functions for mathematical and statistical computing, machine learning, etc., wrapping several JVM libraries"}
{:lib/name "noj",
:lib/url "https://github.com/scicloj/noj",
:lib/category :div-tools,
:tags #{:act},
:star :star,
:description
"a work-in-progress library collecting a few of the relevant data & science with additional convenience layers composing them together"}
{:lib/name "spork",
:lib/url "https://github.com/joinr/spork",
:lib/category :div-tools,
:tags #{:rand :vis :df :ui :graph :opt :act},
:description "a toolbox for data-science and operation research"}
{:lib/name "Incanter",
:lib/url "https://github.com/incanter/incanter",
:lib/category :div-tools,
:tags #{:csv :stat :rand :vis :df},
:description
"an R-like data-science platform built on top of the core.matrix abstractions"}
{:lib/name "huri",
:lib/url "https://github.com/sbelak/huri",
:lib/category :div-tools,
:tags #{:stat :vis :df},
:description
"a toolbox for data-science using plain sequences of maps"})
;; Optimization
({:lib/name "matlib",
:lib/url "https://github.com/atisharma/matlib",
:lib/category :optimization,
:tags #{:act :opt},
:star :star,
:description
"optimisation and control theory tools and convenience functions based on Neanderthal."})
;; Visual tools: literate programming and data visualization
({:lib/name "Saite",
:lib/url "https://github.com/jsa-aerial/saite",
:lib/category :visual-tools,
:tags #{:vis :lit :act :hiccup :ui :vega :cljs},
:star :star,
:description
"data exploration, dashboards, and interactive documents"}
{:lib/name "Oz",
:lib/url "https://github.com/metasoarous/oz",
:lib/category :visual-tools,
:tags #{:vis :lit :act :vega},
:star :star,
:description
"data visuzliation using Vega/Vega-Lite and Hiccup, and a live-reload platform for literate-programming"}
{:lib/name "Clerk",
:lib/url "https://github.com/nextjournal/clerk",
:lib/category :visual-tools,
:tags #{:vis :lit :act :vega :cljs},
:star :star,
:description "local-first notebooks for Clojure"}
{:lib/name "Clay",
:lib/url "https://github.com/scicloj/clay",
:lib/category :visual-tools,
:tags #{:vis :lit :act :vega :cljs},
:star :star,
:description
"a small tool for data visualization and literate programming"}
{:lib/name "rmarkdown-clojure",
:lib/url "https://github.com/genmeblog/rmarkdown-clojure",
:lib/category :visual-tools,
:tags #{:vis :lit},
:star :star,
:description
"rendering Clojure code in various format using [Rmarkdown](https://rmarkdown.rstudio.com/)"}
{:lib/name "Pink-Gorilla/Goldly",
:lib/url "https://github.com/pink-gorilla/goldly",
:lib/category :visual-tools,
:tags #{:vis :exp :lit :act :ui :cljs},
:star :star,
:description
"a port of the Gorilla REPL project using a Clojurescript (Reagent) frontend"}
{:lib/name "Org-babel-clojure",
:lib/url
"https://orgmode.org/worg/org-contrib/babel/languages/ob-doc-clojure.html",
:lib/category :visual-tools,
:tags #{:lt},
:star :star,
:description "executing Clojure inside Emacs Org-mode documents"}
{:lib/name "Devcards",
:lib/url "https://github.com/bhauman/devcards",
:lib/category :visual-tools,
:tags #{:lit :cljs},
:star :star,
:description "visual repl exprience for Clojurescript"}
{:lib/name "Notespace",
:lib/url "https://github.com/scicloj/notespace",
:lib/category :visual-tools,
:tags #{:exp :lit},
:star :star,
:description
"notebook experience with Clojure namespaces edited at any editor"}
{:lib/name "Reveal",
:lib/url "https://vlaaad.github.io/reveal/",
:lib/category :visual-tools,
:tags #{:act},
:star :star,
:description "browser-based data navigation GUI"}
{:lib/name "Portal",
:lib/url "https://github.com/djblue/portal",
:lib/category :visual-tools,
:tags #{:act},
:star :star,
:description "desktop data navigation GUI"}
{:lib/name "Gorilla-REPL",
:lib/url "http://gorilla-repl.org/",
:lib/category :visual-tools,
:tags #{:lit},
:star nil,
:description
"a notebook application written in Clojure and Javascript"}
{:lib/name "proto-repl-charts",
:lib/url "https://github.com/jasongilman/proto-repl-charts",
:lib/category :visual-tools,
:tags #{:vis},
:star nil,
:description "an Atom plugin for displaying tables and graphs"}
{:lib/name "Maria",
:lib/url "https://github.com/mhuebert/maria",
:lib/category :visual-tools,
:tags #{:act :vis :lit :cljs},
:star nil,
:description "a Clojurescript coding environment for beginners"}
{:lib/name "emmy-viewers",
:lib/url "https://github.com/mentat-collective/emmy-viewers",
:lib/category :visual-tools,
:tags #{:act :vis :cljs},
:star :star,
:description "High-performance symbolic, 2D and 3D visual extensions to the Emmy computer algebra system"})
;; ## Vega rendering
({:lib/name "darkstar",
:lib/url "https://github.com/appliedsciencestudio/darkstar",
:lib/category :vega-rendering,
:tags #{:vis :vega},
:star :star,
:description
"a minimal wrapper over Vega/Vega-lite as a single JVM-only Clojure library, using the GraalJS javascript runtime, which [does not require GraalVM runtime](https://github.com/graalvm/graaljs/blob/master/docs/user/RunOnJDK.md) to run."
}
{:lib/name "xvsy",
:lib/url "https://github.com/dvdt/xvsy",
:lib/category :vega-rendering,
:tags #{:vis :vega :cljs},
:star nil,
:description "grammer of graphics over Vega"}
{:lib/name "Vegan",
:lib/url "https://github.com/cnuernber/Vegan/",
:lib/category :vega-rendering,
:tags #{:vis :act :vega},
:star nil,
:description "a nodejs clojurescript library designed to validate and render Vega and Vega-lite files, supports docker-based setup"}
{:lib/name "Vega-clj",
:lib/url "https://github.com/behrica/vg-cli",
:lib/category :vega-rendering,
:tags #{:vis :act :vega},
:star nil,
:description
"a clojure wrapper for the (node-based) Vega-cli and Vega-lite standalone scrips"}
{:lib/name "Optikon",
:lib/url "https://github.com/stathissideris/optikon",
:lib/category :vega-rendering,
:tags #{:vis :vega},
:star nil,
:description "a command line tool that wraps Vega and Vega-lite, using GraalVM polyglot programming"}
{:lib/name "Vegafx",
:lib/url "https://github.com/joinr/Vegafx",
:lib/category :vega-rendering,
:tags #{:vis :vega},
:star nil,
:description
"a static-site viewer using javafx that renders Vega specs"}
{:lib/name "VL example gallery as EDN",
:lib/url "https://behrica.github.io/vl-galery/convert",
:lib/category :vega-rendering,
:tags #{},
:star nil,
:description
"The vega lite example in EDN format, ready to be copy/pasted into Clojure code"})
;; ## Data visualization libraries
({:lib/name "cljplot",
:lib/url "https://github.com/generateme/cljplot",
:lib/category :data-visualization-libraries,
:tags #{:vis :exp :act},
:star :star,
:description
"a data visualization platform written in Clojure and inspired by R's ggplot2 and lattice libraries"}
{:lib/name "Hanami",
:lib/url "https://github.com/jsa-aerial/hanami",
:lib/category :data-visualization-libraries,
:tags #{:vis :act :hiccup :ui :vega :cljs},
:star :star,
:description
"a template system for creating interactive data visualizations using Vega/Vega-lite, Reagent and Re-Com"}
{:lib/name "Hanamicloth",
:lib/url "https://github.com/scicloj/hanamicloth",
:lib/category :data-visualization-libraries,
:tags #{:vis :act :vega :exp},
:star :star,
:description "a data visualization grammar composing Hanami templates and Tablecloth datasets"}
{:lib/name "darkstar",
:lib/url "https://github.com/appliedsciencestudio/darkstar",
:lib/category :data-visualization-libraries,
:tags #{:vis :act :vega :cljs},
:star :star,
:description
"simple data visualization for Clojure/Clojurescript that using vega and [darkstar](https://github.com/appliedsciencestudio/darkstar) for rendering"}
{:lib/name nil,
:lib/url "https://github.com/scicloj/viz.clj",
:lib/category :data-visualization-libraries,
:tags #{:vis :exp :vega},
:description "a data visualization library for beginners (WIP)"}
{:lib/name "Clojure2D",
:lib/url "https://github.com/Clojure2D/clojure2d",
:lib/category :data-visualization-libraries,
:tags #{:vis :act},
:star :star,
:description
"Java2D wrapper + creative coding supporting functions (based on Processing and openFrameworks)"}
{:lib/name "Quil",
:lib/url "https://github.com/quil/quil",
:lib/category :data-visualization-libraries,
:tags #{:vis},
:star :star,
:description "a clojure/clojuresctit wrapper for Processing"}
{:lib/name "thi-ng/geom",
:lib/url "https://github.com/thi-ng/geom",
:lib/category :data-visualization-libraries,
:tags #{:vis :cljs},
:star :star,
:description "2d/3d geometry toolkit"}
{:lib/name "Gorilla-plot",
:lib/url "https://github.com/JonyEpsilon/gorilla-plot",
:lib/category :data-visualization-libraries,
:tags #{:vis :vega},
:star :star,
:description "plotting functions using Vega for Gorilla-REPL"}
{:lib/name "gg4clj",
:lib/url "https://github.com/JonyEpsilon/gg4clj",
:lib/category :data-visualization-libraries,
:tags #{:r :vis},
:star nil,
:description "a clojure DSL for creating ggplot2 plots using R"}
{:lib/name "gg4clj port",
:lib/url "https://github.com/pink-gorilla/gg4clj",
:lib/category :data-visualization-libraries,
:tags #{},
:star nil,
:description
"by the [Pink Gorilla](https://pink-gorilla.github.io) project"}
{:lib/name "Analemma",
:lib/url "https://liebke.github.io/analemma/",
:lib/category :data-visualization-libraries,
:tags #{:vis :exp :cljs},
:star nil,
:description
"generating charts and SVG with a syntax similar to Incanter's and a visual theme similar to ggplot2."}
{:lib/name "emacs-Vega-view",
:lib/url "https://github.com/appliedsciencestudio/emacs-Vega-view",
:lib/category :data-visualization-libraries,
:tags #{:vis :act :vega},
:star nil,
:description
"an emacs mode to facilitate interactive data visualization using Vega from within emacs. Supports elisp, json and clojure notations"})
;; ## Data processing
({:lib/name "ham-fisted"
:lib/url "https://github.com/cnuernber/ham-fisted"
:lib/category :data-processing
:tags #{:act :data}
:star :star
:description "data structures, functions, and macros for efficient functional programming in the JVM"}
{:lib/name "Specter",
:lib/url "https://github.com/redplanetlabs/specter",
:lib/category :data-processing,
:tags #{:act :cljs :data},
:star :star,
:description
"declarative navigation of nested data structures for selection and transformation in Clojure and Clojurescript"}
{:lib/name "Meander",
:lib/url "https://github.com/noprompt/meander",
:lib/category :data-processing,
:tags #{:act :cljs :data},
:star :star,
:description
"transforming neseted data structures by declaratively declaring the shape of source and target datastructures"}
{:lib/name "xforms",
:lib/url "https://github.com/cgrand/xforms",
:lib/category :data-processing,
:tags #{:xform :cljs :data},
:star :star,
:description "a collection of transduces and reducing functions"}
{:lib/name "Odin",
:lib/url "https://github.com/halgari/odin",
:lib/category :data-processing,
:tags #{:data},
:star nil,
:description
"processing nested data structures by extensible logic programming"}
{:lib/name "Charred",
:lib/url "https://github.com/cnuernber/charred",
:lib/category :data-processing,
:tags #{:csv :act :json},
:star :star,
:description
"zero dependency efficient read/write of json and csv data."}
{:lib/name "Semantic Csv",
:lib/url "https://github.com/metasoarous/semantic-csv",
:lib/category :data-processing,
:tags #{:csv :cljs},
:star nil,
:description "higher level csv parsing/processing"})
;; ## Geospatial processing
({:lib/name "geo",
:lib/url "https://github.com/Factual/geo",
:lib/category :geospatial-processing,
:tags #{:geo},
:star :star,
:description
"unifying several JVM libraries for geoprocessing with a Clojure API"}
{:lib/name "ovid",
:lib/url "https://github.com/willcohen/ovid",
:lib/category :geospatial-processing,
:tags #{:geo :exp},
:star :star,
:description "protocols for geospatial concepts"}
{:lib/name "aurelius",
:lib/url "https://github.com/willcohen/aurelius",
:lib/category :geospatial-processing,
:tags #{:xform :geo :exp},
:star :star,
:description "transducible analysis of geospatial features"}
{:lib/name "geo-clj",
:lib/url "https://github.com/r0man/geo-clj",
:lib/category :geospatial-processing,
:tags #{:geo :cljs},
:star :star,
:description "encoding/decoding of geographic datatypes"})
;; ## Dataframe-like structures
({:lib/name "tech.ml.dataset",
:lib/url "https://github.com/techascent/tech.ml.dataset",
:lib/category :dataframe-like-structures,
:tags #{:csv :stat :vis :df :act},
:star :star,
:description
"abstractions for dataframe-like structures in clojure, based on dtype-next infrastructure"}
{:lib/name "tablecloth",
:lib/url "https://github.com/scicloj/tablecloth",
:lib/category :dataframe-like-structures,
:tags #{:csv :df :act},
:star :star,
:description
"a dataframe grammar wrapping tech.ml.dataset, inspired by serveral R libraries"}
{:lib/name "clojask",
:lib/url "https://clojure-finance.github.io/clojask-website/",
:lib/category :dataframe-like-structures,
:tags #{:df :act},
:star :star,
:description
"a library for parallel computing of larger-than-memory datasets."}
{:lib/name "datajure"
:lib/url "https://clojure-finance.github.io/datajure-website/"
:lib/category :dataframe-like-structures
:tags #{:df :act}
:star nil
:description "a domain-specific language for data processing wrapping libraries such as tech.ml.dataset, tablecloth, clojask, and geni"}
{:lib/name "Panthera",
:lib/url "https://github.com/alanmarazzi/panthera",
:lib/category :dataframe-like-structures,
:tags #{:df :py},
:star nil,
:description "a Clojure API wrapping Python's Pandas library"}
{:lib/name "koala",
:lib/url "https://github.com/aria42/koala",
:lib/category :dataframe-like-structures,
:tags #{:csv :exp :df},
:star nil,
:description
"Pandas-like data-processing for clojure with some I/O functionality (experimental)"}
{:lib/name "dataframe",
:lib/url "https://github.com/ghl3/dataframe",
:lib/category :dataframe-like-structures,
:tags #{:df},
:star nil,
:description "Pandas-like data processing for clojure"}
{:lib/name "danzig",
:lib/url "https://github.com/ribelo/wombat",
:lib/category :dataframe-like-structures,
:tags #{:xform :exp :df :act},
:star nil,
:description
"Pandas-like data processing using transducers (danzig was formerly named wombat)"}
{:lib/name "bamboo",
:lib/url "https://github.com/kjothen/bamboo",
:lib/category :dataframe-like-structures,
:tags #{:df},
:star nil,
:description
"a minimal data processing library for Clojure, with some of the capabilities of pandas and numpy"})
;; Spreadsheets
({:lib/name "Docjure",
:lib/url "https://github.com/mjul/docjure",
:lib/category :spreadsheets,
:tags #{:act :xl},
:star :star,
:description
"making it easy to read and write Excel spreadsheets as Clojure data"}
{:lib/name "kixi.large",
:lib/url "https://github.com/MastodonC/kixi.large",
:lib/category :spreadsheets,
:tags #{:exp :act :xl},
:star :star,
:description
"a tech.ml.dataset-friendly fork of Docjure, providing clear entry point at the workbook and sheet level and a way to insert images"}
{:lib/name "Excel-clj",
:lib/url "https://github.com/matthewdowney/excel-clj",
:lib/category :spreadsheets,
:tags #{:act :xl},
:star :star,
:description
"building Excel spreadsheets from Clojure data in various forms such as trees, tables, and more"}
{:lib/name "fxl",
:lib/url "https://github.com/zero-one-group/fxl",
:lib/category :spreadsheets,
:tags #{:act :xl},
:star :star,
:description
"manipulating spreadsheets with a versatile API for handling various spreadsheet constructs"}
{:lib/name "Excel-templates",
:lib/url "https://github.com/tomfaulhaber/excel-templates",
:lib/category :spreadsheets,
:tags #{:exp :xl},
:star nil,
:description
"building Excel spreadsheets from Clojure data combined with an Excel sheet serving as a template"}
{:lib/name "xl-parse-clj",
:lib/url "https://github.com/heykieran/xl-parse-clj",
:lib/category :spreadsheets,
:tags #{:exp :xl},
:star nil,
:description
"converting an Excel workbook to Clojure code"})
;; ## Arrays and linear algebra
({:lib/name "dtype-next",
:lib/url "https://github.com/cnuernber/dtype-next",
:lib/category :arrays-and-linalg,
:tags #{:stat :tensor :act :array :native},
:star :star,
:description
"abstractions and foundations for working with array-like structures and sequential structures"}
{:lib/name "Neanderthal",
:lib/url "https://neanderthal.uncomplicate.org/",
:lib/category :arrays-and-linalg,
:tags #{:gpu :act :array :native :linalg},
:star :star,
:description "matrix and linear algebra in Clojure"}
{:lib/name "tvm-clj",
:lib/url "https://github.com/techascent/tvm-clj",
:lib/category :arrays-and-linalg,
:tags #{:gpu :exp :act :array :native :linalg},
:star nil,
:description
"bindings to [tvm](https://github.com/apache/incubator-tvm)"}
{:lib/name "Geometric Algebra",
:lib/url "https://gitlab.com/jordibc/geometric-algebra",
:lib/category :arrays-and-linalg,
:tags #{:act :linalg :math},
:star nil,
:description "A library to do geometric algebra"}
{:lib/name "jutsu.matrix",
:lib/url "https://github.com/hswick/jutsu.matrix",
:lib/category :arrays-and-linalg,
:tags #{:gpu :array :native :linalg},
:star nil,
:description
"bindigs to [ND4J](https://deeplearning4j.org/docs/latest/nd4j-overview)"}
{:lib/name "core.matrix",
:lib/url "https://github.com/mikera/core.matrix",
:lib/category :arrays-and-linalg,
:tags #{:array :native :linalg :cljs},
:star nil,
:description "matrix abstractions, supporting diffent backends"}
{:lib/name "denisovan",
:lib/url "https://github.com/cailuno/denisovan",
:lib/category :arrays-and-linalg,
:tags #{:gpu :array :native :linalg},
:star nil,
:description "Neanderthal backend for core.matrix"})
;; ### Deep learning
({:lib/name "Deep Diamond",
:lib/url "https://github.com/uncomplicate/deep-diamond",
:lib/category :deep-learning,
:tags #{:gpu :tensor :act :native :dnn},
:star :star,
:description
"infrastructure for tensor computation and deep learning"}
{:lib/name "clj-djl",
:lib/url "https://github.com/scicloj/clj-djl",
:lib/category :deep-learning,
:tags #{:gpu :tensor :act :native :dnn},
:star :star,
:description "a wrapper for the Deep Java Library"}
{:lib/name "MXNet",
:lib/url
"https://mxnet.apache.org/api/clojure",
:lib/category :deep-learning,
:tags #{:dnn},
:star nil,
:description "bindings to Apache MXNet, a part of the MXNet project"}
{:lib/name "jutsu.ai",
:lib/url "https://github.com/hswick/jutsu.ai",
:lib/category :deep-learning,
:tags #{:dnn},
:star nil,
:description "a wrapper for deeplearning4j"}
{:lib/name "Cortex",
:lib/url "https://github.com/originrose/cortex",
:lib/category :deep-learning,
:tags #{:dnn},
:star nil,
:description "a deep learning library written in Clojure"}
{:lib/name "Flare",
:lib/url "https://github.com/aria42/flare",
:lib/category :deep-learning,
:tags #{:dnn},
:star nil,
:description "dynamic neural networks in Clojure"})
;; Statistics
({:lib/name "kixi.stats",
:lib/url "https://github.com/MastodonC/kixi.stats",
:lib/category :statistics,
:tags #{:xform :stat :rand :act},
:star :star,
:description "statistics and random sampling using transducers"}
{:lib/name "fitdistr",
:lib/url "https://github.com/generateme/fitdistr",
:lib/category :statistics,
:tags #{:stat :act},
:star :star,
:description "fitting distributions"})
;; Time series analysis
({:lib/name "tide",
:lib/url "https://github.com/sbelak/tide",
:lib/category :time-series-analysis,
:tags #{:ts},
:star nil,
:description "STL and FastDTW algorithms"})
;; Bayesian computing & probabilistic programming
({:lib/name "inferme",
:lib/url "https://github.com/generateme/inferme",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:rand :vis :act :prob},
:star :star,
:description
"extensible probabilistic programming in Clojure itself (rather than a language variation), with support for visualizations"}
{:lib/name "Gen.clj",
:lib/url "https://github.com/InferenceQL/gen.clj",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:rand :prob :act},
:star :star,
:description "A stack for generative modeling and probabilistic inference."}
{:lib/name "cmdstan-clj",
:lib/url "https://github.com/scicloj/cmdstan-clj",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:exp :act},
:star :star,
:description "Using the Stan statistical modelling language from Clojure using the CmdStan CLI"}
{:lib/name "clj-stan",
:lib/url "https://github.com/thomasathorne/clj-stan",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{},
:star nil,
:description "A library for calling the Stan language from Clojure (by shelling out to cmdstan)."}
{:lib/name "bayadera",
:lib/url "https://github.com/uncomplicate/bayadera",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:stat :rand :gpu :prob},
:star nil,
:description "Bayesian computing using the GPU"}
{:lib/name "sampling",
:lib/url "https://github.com/bigmlcom/sampling",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:rand},
:star nil,
:description "support srandom sampling of different kinds"}
{:lib/name "distributions",
:lib/url "https://github.com/michaellindon/distributions",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:rand :prob},
:star nil,
:description
"random sampling and some basic Bayesian computing for certain families of distributions"}
{:lib/name "metaprob",
:lib/url "https://github.com/probcomp/metaprob",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:rand :exp :prob :cljs},
:star nil,
:description
"an embedded languages for probabilistic programming and metaprogramming"}
{:lib/name "daphne",
:lib/url "https://github.com/plai-group/daphne",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:exp :prob},
:star nil,
:description
"a probabilisic programming compiler from Clojure syntax to Pytorch"}
{:lib/name "anglican",
:lib/url "http://probprog.ml/anglican/index.html",
:lib/category :bayesian-computing-probabilistic-programming,
:tags #{:rand :prob :cljs},
:star nil,
:description
"a probabilistic programming language written in clojure, that supports a subset of clojure"})
;; Random sampling and distributions
({:lib/name "masonclj",
:lib/url "https://github.com/mars0i/masonclj",
:lib/category :random-sampling-and-simulations,
:tags #{:rand :act},
:star :star,
:description
"a Clojure wrapper of [MASON](https://cs.gmu.edu/~eclab/projects/mason/), which is a Java library for discrete-event multiagent simulation and agent-based modeling."}
{:lib/name "dsim.cljc",
:lib/url "https://github.com/dvlopt/dsim.cljc",
:lib/category :random-sampling-and-simulations,
:tags #{:rand :act :cljs},
:star :star,
:description
"an event-driven engine for Clojure(script) heavily borrowing ideas from discrete-event simulation and hybrid dynamical systems"}
{:lib/name "date-gen",
:lib/url "https://github.com/conjunctive/date-gen",
:lib/category :random-sampling-and-simulations,
:tags #{:rand :act},
:star nil,
:description "randomized date generation supporting CSV output"}
{:lib/name "drand",
:lib/url "https://github.com/jimpil/drand-clj",
:lib/category :random-sampling-and-simulations,
:tags #{:rand},
:star nil,
:description
"a client to the [Drand](https://drand.love) randomness service"})
;; ## Science
({:lib/name "emmy",
:lib/url "https://github.com/mentat-collective/emmy",
:lib/category :science,
:tags #{:act},
:star :star,
:description
"(was SICMUtils) a library for algebra, calculus, differential geometry and physics based on the [SICM](mitpress.mit.edu/books/structure-and-interpretation-classical-mechanics) book by Sussman & Wisdom"}
{:lib/name "cljbox2d",
:lib/url "https://github.com/lambdaisland/cljbox2d",
:lib/category :science,
:tags #{:act :cljs},
:star :star,
:description
"a Clojure/Clojurescript wrapper of the Box2D physics engine API"})
;; ## Machine learning
({:lib/name "scicloj.ml",
:lib/url "https://github.com/scicloj/scicloj.ml",
:lib/category :machine-learning,
:tags #{:act :ml},
:star :star,
:description
"A machine learning platform supporting a large collection of algorithms and pipeline ergonomics"}
{:lib/name "clj-ml",
:lib/url "https://github.com/joshuaeckroth/clj-ml/",
:lib/category :machine-learning,
:tags #{:ml},
:star nil,
:description
"machine learning based on wrapping libraries such as the Weka Java library"}
{:lib/name "clj-boost",
:lib/url "https://gitlab.com/alanmarazzi/clj-boost",
:lib/category :machine-learning,
:tags #{:ml},
:star nil,
:description "a wrapper for XGBoost"}
{:lib/name "propaganda",
:lib/url "https://github.com/tgk/propaganda",
:lib/category :machine-learning,
:tags #{:ml},
:star nil,
:description
"an implementation of the propagator computational model"}
{:lib/name "dvc",
:lib/url "https://dvc.org/",
:lib/category :machine-learning,
:tags #{:ml},
:star nil,
:description
"A programming language independent tool for ML experiment tracking, Clojure fully supported"})
;; ### Genetic programming
({:lib/name "Propeller",
:lib/url "https://github.com/lspector/propeller",
:lib/category :genetic-programming,
:tags #{:act :ml},
:star :star,
:description
"\"Yet another Push-based genetic programming system in Clojure\""}
{:lib/name "Clojush",
:lib/url "https://github.com/lspector/Clojush",
:lib/category :genetic-programming,
:tags #{:act :ml},
:star nil,
:description
"an implementation of the Push programming language for genetic programming"})
;; Natural language processing
({:lib/name "DataLinguist",
:lib/url "https://github.com/simongray/datalinguist",
:lib/category :natural-language-processing,
:tags #{:act :nlp},
:star :star,
:description "a Clojure wrapper for Stanford CoreNLP"})
;; Large language models and related services
(
{:lib/name "Bosquet",
:lib/url "https://github.com/zmedelis/bosquet",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "LLMOps for Large Language Model based applications"}
{:lib/name "llama.clj",
:lib/url "https://github.com/phronmophobic/llama.clj",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A wrapper of [llama.cpp](https://github.com/ggerganov/llama.cpp)"}
{:lib/name "clip.clj",
:lib/url "https://github.com/phronmophobic/clip.clj",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A wrapper for [clip.cpp](https://github.com/monatis/clip.cpp) for embeddins of images and text"}
{:lib/name "Ragcats",
:lib/url "https://github.com/constacts/ragtacts"
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A set of functions for building LLM applications including RAGs."}
{:lib/name "cohere-clojure",
:lib/url "https://github.com/danielsz/cohere-clojure",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "An Unofficial port of the [Cohere](https://docs.cohere.com/docs) SDK"}
{:lib/name "openai-clojure",
:lib/url "https://github.com/wkok/openai-clojure",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A wrapper of the [OpenAI API](https://platform.openai.com/docs/introduction) and [Azure OpenAI API](https://learn.microsoft.com/en-us/azure/ai-services/openai/reference)"}
{:lib/name "openai-api",
:lib/url "https://github.com/pmatiello/openai-api",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A wrapper of the [OpenAI API](https://platform.openai.com/docs/introduction)"}
{:lib/name "multi-gpt",
:lib/url "https://github.com/cjbarre/multi-gpt",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A wrapper of the Open AI GPT Chat API with conversational memory and WIP agents support"}
{:lib/name "vald-client-clj",
:lib/url "https://github.com/vdaas/vald-client-clj",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "A gRPC client library for the [Vald](https://github.com/vdaas/vald) distributed vector database"}
{:lib/name "simix",
:lib/url "https://github.com/tsers/simix"
:lib/category :large-language-models,
:tags #{:llm},
:star :star,
:description "Similarity search for Cloure, build on top of hnsw"}
{:lib/name "clojurellm-data",
:lib/url "https://github.com/ruped/clojurellm-data",
:lib/category :large-language-models,
:tags #{:act :llm},
:star :star,
:description "Dataset curation for fine tuning an LLM for Clojure"}
{:lib/name "instructor-clj"
:lib/url "https://github.com/kapilreddy/instructor-clj"
:lib/category :large-language-models
:tags #{:act :llm}
:description "A library inspired by [instructor](https://github.com/jxnl/instructor), making it easy to have structured output from LLMs (using [Malli](https://github.com/metosin/malli) for defining schemas)"})
;; Interop
({:lib/name "clj-polyglot-app",
:lib/url "https://github.com/behrica/clj-polyglot-app",
:lib/category :interop,
:tags #{:act :interop},
:star :star,
:description "A deps-new template to create a polyglot app in Clojure (Clojure, R, & Python)"}
{:lib/name "Libpython-clj",
:lib/url "https://github.com/clj-python/libpython-clj",
:lib/category :interop,
:tags #{:act :interop},
:star :star,
:description "interop with Python"}
{:lib/name "clj-python-trampoline",
:lib/url "https://github.com/tristanstraub/clj-python-trampoline",
:lib/category :interop,
:tags #{:interop},
:description
"using libpython-clj from an already running python process, without needing any special python builds"}
{:lib/name "Libjulia-clj",
:lib/url "https://github.com/cnuernber/libjulia-clj",
:lib/category :interop,
:tags #{:act :interop},
:star :star,
:description "Julia bindings for Clojure"}
{:lib/name "Wolframite",
:lib/url "https://scicloj.github.io/wolframite/",
:lib/category :interop,
:tags #{:act :interop},
:star :star,
:description "interop with Wolfram language"}
{:lib/name "ClojisR",
:lib/url "https://scicloj.github.io/clojisr/",
:lib/category :interop,
:tags #{:act :interop},
:star :star,
:description "interop with R and Renjin (R on the JVM)"}
{:lib/name "graalvm-interop",
:lib/url "https://github.com/davidpham87/graalvm-rinterop",
:lib/category :interop,
:tags #{:interop},
:star nil,
:description "interop with FastR (GraalVM's R)"}
{:lib/name "rdata",
:lib/url "https://github.com/appliedsciencestudio/rdata/",
:lib/category :interop,
:tags #{},
:star nil,
:description
"A Renjin (pure-JVM R) wrapper to allow Clojure programs to easily read R's RData file format"}
{:lib/name "from-scala",
:lib/url "https://github.com/t6/from-scala",
:lib/category :interop,
:tags #{:interop},
:star nil,
:description "interop with Scala"}
{:lib/name "Interop template project",
:lib/url "https://github.com/behrica/clj-py-r-template",
:lib/category :interop,
:tags #{:interop},
:star nil,
:description
"A project template which configure several interop libraries automaticaly using Docker"})
;; Parallel computing
({:lib/name "claypoole",
:lib/url "https://github.com/TheClimateCorporation/claypoole",
:lib/category :parallel-computing,
:tags #{:pmap :future :act :for},
:star :star,
:description
"threadpool-based parallel versions of Clojure functions such as `pmap`, `future`, and `for`"}
{:lib/name "parallel",
:lib/url "https://github.com/reborg/parallel",
:lib/category :parallel-computing,
:tags #{},
:star :star,
:description
"parallel-enabled functions, addditional transducers and supporting utilities"}
{:lib/name "tesser",
:lib/url "https://github.com/aphyr/tesser",
:lib/category :parallel-computing,
:tags #{},
:star :star,
:description
"a library for concurrent & commutative folds, including some statistical tasks and Hadoop support"}
{:lib/name "tech.parallel",
:lib/url "https://github.com/techascent/tech.parallel",
:lib/category :parallel-computing,
:tags #{:act},
:star :star,
:description "parallelization and threading primitives"})
;; Distributed computing
({:lib/name "titanoboa",
:lib/url "https://www.titanoboa.io",
:lib/category :distributed-computing,
:tags #{:act},
:star :star,
:description
"a fully distributed, highly scalable and fault tolerant workflow orchestration platform"}
{:lib/name "onyx",
:lib/url "https://github.com/onyx-platform",
:lib/category :distributed-computing,
:tags #{},
:star :star,
:description "a library for distributed computation in the cloud"}
{:lib/name "overseer",
:lib/url "https://github.com/framed-data/overseer",
:lib/category :distributed-computing,
:tags #{},
:star nil,
:description "a library for building and running data pipelines"})
;; Hadoop
({:lib/name "Parkour",
:lib/url "https://github.com/damballa/parkour",
:lib/category :hadoop,
:tags #{},
:star nil,
:description "Hadoop MapReduce in idiomatic Clojure"})
;; Spark
({:lib/name "geni",
:lib/url "https://github.com/zero-one-group/geni",
:lib/category :spark,
:tags #{:df :act},
:star :star,
:description "a Spark wrapper"}
{:lib/name "sparkling",
:lib/url "https://github.com/gorillalabs/sparkling",
:lib/category :spark,
:tags #{},
:star nil,
:description "a Spark wrapper"}
{:lib/name "flambo",
:lib/url "https://github.com/sorenmacbeth/flambo",
:lib/category :spark,
:tags #{},
:star nil,
:description "a Spark wrapper"})