Add additional fields to Swab&Send ETL, requested by Chu lab

seattleflu · Apr 11, 2024 · 51ca0a0 · 51ca0a0
1 parent 72156ca
commit 51ca0a0
Show file tree

Hide file tree

Showing 2 changed files with 32 additions and 0 deletions.
diff --git a/lib/seattleflu/id3c/cli/command/etl/redcap_det_swab_and_home_flu.py b/lib/seattleflu/id3c/cli/command/etl/redcap_det_swab_and_home_flu.py
@@ -438,6 +438,7 @@ def build_questionnaire_items(question: str) -> Optional[dict]:
         'barcode_confirm',
         'travel_states',
         'travel_countries',
+        'child_daycare',
     ]
 
     integer_questions = [
@@ -461,6 +462,15 @@ def build_questionnaire_items(question: str) -> Optional[dict]:
         'smoke_9a005a',
         'chronic_illness',
         'housing_type',
+        'agegroups',
+        'regular_activities_0',
+        'school_interference_0',
+        'activities_impacted_0v2',
+        'regular_activities_1',
+        'activities_impacted_2',
+        'school_interference_1',
+        'work_impact_0',
+        'work_impact',
     ]
 
     question_categories = {
@@ -474,6 +484,13 @@ def build_questionnaire_items(question: str) -> Optional[dict]:
         'insurance',
         'smoke_9a005a',
         'chronic_illness',
+        'agegroups',
+        'school_interference_0',
+        'activities_impacted_0v2',
+        'activities_impacted_2',
+        'school_interference_1',
+        'work_impact_0',
+        'work_impact',
     ]
 
     # Do some pre-processing

diff --git a/lib/seattleflu/id3c/cli/command/etl/redcap_det_swab_n_send.py b/lib/seattleflu/id3c/cli/command/etl/redcap_det_swab_n_send.py
@@ -415,6 +415,7 @@ def build_questionnaire_items(question: str) -> Optional[dict]:
         'barcode_confirm',
         'travel_states',
         'travel_countries',
+        'child_daycare',
     ]
 
     integer_questions = [
@@ -438,6 +439,14 @@ def build_questionnaire_items(question: str) -> Optional[dict]:
         'smoke_9a005a',
         'chronic_illness',
         'housing_type',
+        'agegroups',
+        'regular_activities_0',
+        'school_interference_0',
+        'activities_impacted_0',
+        'regular_activities_1',
+        'activities_impacted_2',
+        'school_interference_1',
+        'work_impact',
     ]
 
     # Do some pre-processing
@@ -446,6 +455,12 @@ def build_questionnaire_items(question: str) -> Optional[dict]:
         'insurance',
         'smoke_9a005a',
         'chronic_illness',
+        'agegroups',
+        'school_interference_0',
+        'activities_impacted_0',
+        'activities_impacted_2',
+        'school_interference_1',
+        'work_impact',
     ]
 
     question_categories = {