Merge pull request #388 from seattleflu/bencap/additional-vax-codes

Add Four new Covid-19 Vaccine Codes
seattleflu · Sep 5, 2024 · eb655b6 · eb655b6
2 parents 2b9550d + ce297c6
commit eb655b6
Showing 1 changed file with 12 additions and 1 deletion.
diff --git a/lib/seattleflu/id3c/cli/command/etl/redcap_det_uw_retrospectives.py b/lib/seattleflu/id3c/cli/command/etl/redcap_det_uw_retrospectives.py
@@ -305,6 +305,8 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
 
     # COVID-19 vaccine CVX codes were sourced from here:
     # https://www.cdc.gov/vaccines/programs/iis/COVID-19-related-codes.html
+    # this link has moved:
+    # https://www.cdc.gov/iis/code-sets/covid-19-related-codes.html
     cvx_codes = {
         88: {
             "system": "http://hl7.org/fhir/sid/cvx",
@@ -389,7 +391,7 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
         309: {
             "system": "http://hl7.org/fhir/sid/cvx",
             "code": "309",
-            "display": "COVID-19, mRNA, LNP-S, PF, tris-sucrose, 30 mcg/0.3 mL"            
+            "display": "COVID-19, mRNA, LNP-S, PF, tris-sucrose, 30 mcg/0.3 mL"
         },
         311: {
             "system": "http://hl7.org/fhir/sid/cvx",
@@ -401,6 +403,11 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
             "code": "312",
             "display": "COVID-19, mRNA, LNP-S, PF, 50 mcg/0.5 mL"
         },
+        313: {
+            "system": "http://hl7.org/fhir/sid/cvx",
+            "code": "313",
+            "display": "COVID-19 vaccine, Subunit, rS-nanoparticle, adjuvanted, PF, 5mcg/0.5mL"
+        },
         511: {
             "system": "http://hl7.org/fhir/sid/cvx",
             "code": "511",
@@ -445,8 +452,12 @@ def create_immunization(record: dict, patient_reference: dict) -> Optional[list]
         "covid-19 pfizer mrna bivalent 5-11 yrs old":                       301,
         "covid-19 pfizer mrna bivalent 6 mos-4 yrs old":                    308,
         "covid-19 pfizer mrna 2023-24 12 yrs and older (comirnaty)":        309,
+        "covid-19 pfizer mrna 12 yrs and older (comirnaty)":                309,
         "covid-19 moderna mrna 2023-24 6 mos-11 yrs old":                   311,
+        "covid-19 moderna mrna 6 mos-11 yrs old":                           311,
         "covid-19 moderna mrna 2023-24 12 yrs and older (spikevax)":        312,
+        "covid-19 moderna mrna 12 yrs and older (spikevax)":                312,
+        "covid-19 novavax subunit adjuvanted monovalent":                   313,
         "covid-19 sinovac inactivated, non-us (coronavac)":                 511,
         "": None
     }